RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 SKAP1Q86WV1 359 aa13.44□□□□□ -0.26
SP140-208ENST00000473711 SBF2Q86WG5 1849 aa13.43□□□□□ -0.26
SP140-208ENST00000473711 MAP3K15Q6ZN16 1313 aa13.43□□□□□ -0.26
SP140-208ENST00000473711 GRM8O00222 908 aa13.43□□□□□ -0.26
SP140-208ENST00000473711 ATP8B2P98198 1209 aa13.43□□□□□ -0.26
SP140-208ENST00000473711 TCIRG1Q13488 830 aa13.43□□□□□ -0.26
SP140-208ENST00000473711 HLFQ16534 295 aa13.43□□□□□ -0.26
SP140-208ENST00000473711 DZIP3Q86Y13 1208 aaKnown RBP13.43□□□□□ -0.26
SP140-208ENST00000473711 JARID2Q92833 1246 aaPredicted RBP13.43□□□□□ -0.26
SP140-208ENST00000473711 KIF12Q96FN5 646 aa13.43□□□□□ -0.26
SP140-208ENST00000473711 VASPP50552 380 aaPredicted RBP13.42□□□□□ -0.26
SP140-208ENST00000473711 RC3H1Q5TC82 1133 aaKnown RBP13.42□□□□□ -0.26
SP140-208ENST00000473711 PDZRN3Q9UPQ7 1066 aa13.42□□□□□ -0.26
SP140-208ENST00000473711 UTYO14607 1347 aa13.41□□□□□ -0.26
SP140-208ENST00000473711 CNTNAP4Q9C0A0 1308 aa13.41□□□□□ -0.26
SP140-208ENST00000473711 A0A087WZG4 1122 aa13.41□□□□□ -0.26
SP140-208ENST00000473711 ERVV-1B6SEH8 477 aa13.41□□□□□ -0.26
SP140-208ENST00000473711 GIGYF2Q6Y7W6 1299 aaKnown RBP13.41□□□□□ -0.26
SP140-208ENST00000473711 SMIM5Q71RC9 77 aa13.41□□□□□ -0.26
SP140-208ENST00000473711 SMC5Q8IY18 1101 aa13.41□□□□□ -0.26
SP140-208ENST00000473711 SUCLG2Q96I99 432 aa13.41□□□□□ -0.26
SP140-208ENST00000473711 ISCA1Q9BUE6 129 aa13.41□□□□□ -0.26
SP140-208ENST00000473711 CWC25Q9NXE8 425 aaPredicted RBP13.41□□□□□ -0.26
SP140-208ENST00000473711 HDAC5Q9UQL6 1122 aa13.41□□□□□ -0.26
SP140-208ENST00000473711 PNMA6EA0A0J9YXQ4 647 aa13.4□□□□□ -0.26
SP140-208ENST00000473711 HMMRO75330 724 aa13.4□□□□□ -0.26
SP140-208ENST00000473711 APBA3O96018 575 aa13.4□□□□□ -0.26
SP140-208ENST00000473711 CCDC191Q8NCU4 936 aa13.4□□□□□ -0.26
SP140-208ENST00000473711 GCC1Q96CN9 775 aa13.4□□□□□ -0.26
SP140-208ENST00000473711 FAM212AQ96EL1 285 aa13.4□□□□□ -0.26
SP140-208ENST00000473711 DCTPP1Q9H773 170 aa13.4□□□□□ -0.26
SP140-208ENST00000473711 LRRC4BQ9NT99 713 aa13.4□□□□□ -0.26
SP140-208ENST00000473711 H7C1W4 665 aa13.39□□□□□ -0.27
SP140-208ENST00000473711 RPS6KA4O75676 772 aa13.39□□□□□ -0.27
SP140-208ENST00000473711 GPTP24298 496 aa13.39□□□□□ -0.27
SP140-208ENST00000473711 HSP90AB3PQ58FF7 597 aa13.39□□□□□ -0.27
SP140-208ENST00000473711 UBE3BQ7Z3V4 1068 aa13.39□□□□□ -0.27
SP140-208ENST00000473711 PPP1R42Q7Z4L9 355 aa13.39□□□□□ -0.27
SP140-208ENST00000473711 N4BP2Q86UW6 1770 aaPredicted RBP13.39□□□□□ -0.27
SP140-208ENST00000473711 ARFGEF2Q9Y6D5 1785 aa13.38□□□□□ -0.27
SP140-208ENST00000473711 IBTKQ9P2D0 1353 aaPredicted RBP13.38□□□□□ -0.27
SP140-208ENST00000473711 GNPATO15228 680 aa13.38□□□□□ -0.27
SP140-208ENST00000473711 CAMTA2O94983 1202 aa13.38□□□□□ -0.27
SP140-208ENST00000473711 RGS3P49796 1198 aa13.38□□□□□ -0.27
SP140-208ENST00000473711 TRIM28Q13263 835 aaKnown RBP13.38□□□□□ -0.27
SP140-208ENST00000473711 RTL5Q5HYW3 569 aaPredicted RBP13.38□□□□□ -0.27
SP140-208ENST00000473711 SLC27A3Q5K4L6 730 aa13.38□□□□□ -0.27
SP140-208ENST00000473711 ANKRD45Q5TZF3 282 aa13.38□□□□□ -0.27
SP140-208ENST00000473711 KAZALD1Q96I82 304 aa13.38□□□□□ -0.27
SP140-208ENST00000473711 CICQ96RK0 1608 aaPredicted RBP13.38□□□□□ -0.27
SP140-208ENST00000473711 MYH14Q7Z406 1995 aaKnown RBP13.38□□□□□ -0.27
SP140-208ENST00000473711 ZNF831Q5JPB2 1677 aa13.37□□□□□ -0.27
SP140-208ENST00000473711 COL15A1P39059 1388 aa13.37□□□□□ -0.27
SP140-208ENST00000473711 MAP3K13O43283 966 aa13.37□□□□□ -0.27
SP140-208ENST00000473711 SRGAP3O43295 1099 aa13.37□□□□□ -0.27
SP140-208ENST00000473711 CASP7P55210 303 aa13.37□□□□□ -0.27
SP140-208ENST00000473711 TXNRD1Q16881 649 aa13.37□□□□□ -0.27
SP140-208ENST00000473711 EPHA10Q5JZY3 1008 aa13.37□□□□□ -0.27
SP140-208ENST00000473711 AK7Q96M32 723 aa13.37□□□□□ -0.27
SP140-208ENST00000473711 BICC1Q9H694 974 aaKnown RBP13.37□□□□□ -0.27
SP140-208ENST00000473711 RTCBQ9Y3I0 505 aaKnown RBP13.37□□□□□ -0.27
SP140-208ENST00000473711 NUP188Q5SRE5 1749 aa13.36□□□□□ -0.27
SP140-208ENST00000473711 APBB1O00213 710 aa13.36□□□□□ -0.27
SP140-208ENST00000473711 PLSCR1O15162 318 aa13.36□□□□□ -0.27
SP140-208ENST00000473711 NUCB1Q02818 461 aa13.36□□□□□ -0.27
SP140-208ENST00000473711 NLRP10Q86W26 655 aa13.36□□□□□ -0.27
SP140-208ENST00000473711 ZNF34Q8IZ26 560 aa13.36□□□□□ -0.27
SP140-208ENST00000473711 SSH3Q8TE77 659 aa13.36□□□□□ -0.27
SP140-208ENST00000473711 RREB1Q92766 1687 aa13.36□□□□□ -0.27
SP140-208ENST00000473711 LY75O60449 1722 aa13.36□□□□□ -0.27
SP140-208ENST00000473711 COL5A3P25940 1745 aaPredicted RBP13.36□□□□□ -0.27
SP140-208ENST00000473711 CHD1LQ86WJ1 897 aa13.35□□□□□ -0.27
SP140-208ENST00000473711 AMIGO3Q86WK7 504 aa13.35□□□□□ -0.27
SP140-208ENST00000473711 ARHGEF1Q92888 912 aaKnown RBP13.35□□□□□ -0.27
SP140-208ENST00000473711 FAM89AQ96GI7 184 aa13.35□□□□□ -0.27
SP140-208ENST00000473711 LNPKQ9C0E8 428 aa13.35□□□□□ -0.27
SP140-208ENST00000473711 BCL11AQ9H165 835 aa13.35□□□□□ -0.27
SP140-208ENST00000473711 PHF14O94880 888 aa13.34□□□□□ -0.27
SP140-208ENST00000473711 PCCAP05165 728 aaPredicted RBP13.34□□□□□ -0.27
SP140-208ENST00000473711 PDE4AP27815 886 aa13.34□□□□□ -0.27
SP140-208ENST00000473711 MTX1Q13505 466 aa13.34□□□□□ -0.27
SP140-208ENST00000473711 TRAPPC3LQ5T215 181 aa13.34□□□□□ -0.27
SP140-208ENST00000473711 ASTLQ6HA08 431 aaPredicted RBP13.34□□□□□ -0.27
SP140-208ENST00000473711 SYNE4Q8N205 404 aa13.34□□□□□ -0.27
SP140-208ENST00000473711 KLHL34Q8N239 644 aa13.34□□□□□ -0.27
SP140-208ENST00000473711 SRP68Q9UHB9 627 aaKnown RBP13.34□□□□□ -0.27
SP140-208ENST00000473711 NARFQ9UHQ1 456 aa13.34□□□□□ -0.27
SP140-208ENST00000473711 EXOC6BQ9Y2D4 811 aa13.34□□□□□ -0.27
SP140-208ENST00000473711 ZNF652Q9Y2D9 606 aa13.34□□□□□ -0.27
SP140-208ENST00000473711 AFDNP55196 1824 aaKnown RBP13.34□□□□□ -0.27
SP140-208ENST00000473711 FAM177BA6PVY3 158 aa13.33□□□□□ -0.28
SP140-208ENST00000473711 SMARCA5O60264 1052 aaPredicted RBP13.33□□□□□ -0.28
SP140-208ENST00000473711 ZPR1O75312 459 aa13.33□□□□□ -0.28
SP140-208ENST00000473711 SURF6O75683 361 aaKnown RBP13.33□□□□□ -0.28
SP140-208ENST00000473711 FOXO4P98177 505 aa13.33□□□□□ -0.28
SP140-208ENST00000473711 SUSD4Q5VX71 490 aa13.33□□□□□ -0.28
SP140-208ENST00000473711 USPL1Q5W0Q7 1092 aa13.33□□□□□ -0.28
SP140-208ENST00000473711 CLEC4GQ6UXB4 293 aa13.33□□□□□ -0.28
SP140-208ENST00000473711 ZBTB38Q8NAP3 1195 aaPredicted RBP13.33□□□□□ -0.28
SP140-208ENST00000473711 TRMT112Q9UI30 125 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms