RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 IL17REQ8NFR9 667 aa9.27□□□□□ -0.93
CKS1B-205ENST00000473344 TIAM2Q8IVF5 1701 aa9.27□□□□□ -0.93
CKS1B-205ENST00000473344 DLEC1Q9Y238 1755 aa9.27□□□□□ -0.93
CKS1B-205ENST00000473344 SBF1O95248 1867 aa9.26□□□□□ -0.93
CKS1B-205ENST00000473344 IQCA1LA6NCM1 817 aa9.26□□□□□ -0.93
CKS1B-205ENST00000473344 POTECB2RU33 542 aa9.26□□□□□ -0.93
CKS1B-205ENST00000473344 DDNO94850 711 aaPredicted RBP9.26□□□□□ -0.93
CKS1B-205ENST00000473344 PSEN1P49768 467 aa9.26□□□□□ -0.93
CKS1B-205ENST00000473344 STYK1Q6J9G0 422 aa9.26□□□□□ -0.93
CKS1B-205ENST00000473344 PRPF40BQ6NWY9 871 aaKnown RBP9.26□□□□□ -0.93
CKS1B-205ENST00000473344 DZIP3Q86Y13 1208 aaKnown RBP9.26□□□□□ -0.93
CKS1B-205ENST00000473344 PDCD7Q8N8D1 485 aaKnown RBP9.26□□□□□ -0.93
CKS1B-205ENST00000473344 MASTLQ96GX5 879 aa9.26□□□□□ -0.93
CKS1B-205ENST00000473344 ZNF652Q9Y2D9 606 aa9.26□□□□□ -0.93
CKS1B-205ENST00000473344 LTBP3Q9NS15 1303 aa9.26□□□□□ -0.93
CKS1B-205ENST00000473344 UBR2Q8IWV8 1755 aa9.25□□□□□ -0.93
CKS1B-205ENST00000473344 PER1O15534 1290 aaPredicted RBP9.25□□□□□ -0.93
CKS1B-205ENST00000473344 CAMTA2O94983 1202 aa9.25□□□□□ -0.93
CKS1B-205ENST00000473344 SRGNP10124 158 aa9.25□□□□□ -0.93
CKS1B-205ENST00000473344 PDAP1Q13442 181 aaKnown RBP9.25□□□□□ -0.93
CKS1B-205ENST00000473344 NBPF5PQ86XG9 351 aaPredicted RBP9.25□□□□□ -0.93
CKS1B-205ENST00000473344 RTF1Q92541 710 aaKnown RBP9.25□□□□□ -0.93
CKS1B-205ENST00000473344 SPOCK2Q92563 424 aa9.25□□□□□ -0.93
CKS1B-205ENST00000473344 CFAP53Q96M91 514 aa9.25□□□□□ -0.93
CKS1B-205ENST00000473344 MKRN1Q9UHC7 482 aaKnown RBP9.25□□□□□ -0.93
CKS1B-205ENST00000473344 SCN7AQ01118 1682 aa9.24□□□□□ -0.93
CKS1B-205ENST00000473344 CCDC93Q567U6 631 aa9.24□□□□□ -0.93
CKS1B-205ENST00000473344 TPTE2Q6XPS3 522 aa9.24□□□□□ -0.93
CKS1B-205ENST00000473344 NUDCQ9Y266 331 aa9.24□□□□□ -0.93
CKS1B-205ENST00000473344 SNRPA1P09661 255 aaKnown RBP9.23□□□□□ -0.93
CKS1B-205ENST00000473344 NPR1P16066 1061 aa9.23□□□□□ -0.93
CKS1B-205ENST00000473344 GTF2E1P29083 439 aaPredicted RBP9.23□□□□□ -0.93
CKS1B-205ENST00000473344 PRKAR2BP31323 418 aa9.23□□□□□ -0.93
CKS1B-205ENST00000473344 PIP4K2AP48426 406 aaPredicted RBP9.23□□□□□ -0.93
CKS1B-205ENST00000473344 CLEC4GQ6UXB4 293 aa9.23□□□□□ -0.93
CKS1B-205ENST00000473344 LDHDQ86WU2 507 aa9.23□□□□□ -0.93
CKS1B-205ENST00000473344 CEMIPQ8WUJ3 1361 aa9.23□□□□□ -0.93
CKS1B-205ENST00000473344 FAM177BA6PVY3 158 aa9.22□□□□□ -0.93
CKS1B-205ENST00000473344 KCNQ3O43525 872 aa9.22□□□□□ -0.93
CKS1B-205ENST00000473344 FKBP4Q02790 459 aaKnown RBP eCLIP9.22□□□□□ -0.93
CKS1B-205ENST00000473344 EAPPQ56P03 285 aaPredicted RBP9.22□□□□□ -0.93
CKS1B-205ENST00000473344 RTKN2Q8IZC4 609 aa9.22□□□□□ -0.93
CKS1B-205ENST00000473344 AIDAQ96BJ3 306 aa9.22□□□□□ -0.93
CKS1B-205ENST00000473344 PHACTR3Q96KR7 559 aa9.22□□□□□ -0.93
CKS1B-205ENST00000473344 NIP7Q9Y221 180 aaKnown RBP eCLIP9.22□□□□□ -0.93
CKS1B-205ENST00000473344 USP16Q9Y5T5 823 aa9.22□□□□□ -0.93
CKS1B-205ENST00000473344 NPC1L1Q9UHC9 1359 aa9.22□□□□□ -0.93
CKS1B-205ENST00000473344 COL3A1P02461 1466 aaPredicted RBP9.21□□□□□ -0.93
CKS1B-205ENST00000473344 TMEM88BA6NKF7 163 aa9.21□□□□□ -0.94
CKS1B-205ENST00000473344 U2AF1L5P0DN76 240 aaPredicted RBP9.21□□□□□ -0.94
CKS1B-205ENST00000473344 ALDH1B1P30837 517 aa9.21□□□□□ -0.94
CKS1B-205ENST00000473344 U2AF1Q01081 240 aaKnown RBP eCLIP9.21□□□□□ -0.94
CKS1B-205ENST00000473344 TAF1DQ9H5J8 278 aaPredicted RBP9.21□□□□□ -0.94
CKS1B-205ENST00000473344 ZNF277Q9NRM2 450 aaPredicted RBP9.21□□□□□ -0.94
CKS1B-205ENST00000473344 COL11A2P13942 1736 aaPredicted RBP9.21□□□□□ -0.94
CKS1B-205ENST00000473344 VIRMAQ69YN4 1812 aaKnown RBP9.21□□□□□ -0.94
CKS1B-205ENST00000473344 ANKRD31Q8N7Z5 1873 aa9.21□□□□□ -0.94
CKS1B-205ENST00000473344 PRAMEF22A3QJZ6 481 aa9.2□□□□□ -0.94
CKS1B-205ENST00000473344 MCM10Q7L590 875 aa9.2□□□□□ -0.94
CKS1B-205ENST00000473344 PNMA8AQ86V59 439 aaPredicted RBP9.2□□□□□ -0.94
CKS1B-205ENST00000473344 RSPH6AQ9H0K4 717 aa9.2□□□□□ -0.94
CKS1B-205ENST00000473344 HACL1Q9UJ83 578 aa9.2□□□□□ -0.94
CKS1B-205ENST00000473344 CNTNAP1P78357 1384 aa9.2□□□□□ -0.94
CKS1B-205ENST00000473344 FER1L6Q2WGJ9 1857 aa9.19□□□□□ -0.94
CKS1B-205ENST00000473344 G3V3G9 751 aa9.19□□□□□ -0.94
CKS1B-205ENST00000473344 RGL2O15211 777 aa9.19□□□□□ -0.94
CKS1B-205ENST00000473344 NEFMP07197 916 aa9.19□□□□□ -0.94
CKS1B-205ENST00000473344 EPHX2P34913 555 aa9.19□□□□□ -0.94
CKS1B-205ENST00000473344 IARSP41252 1262 aaKnown RBP9.19□□□□□ -0.94
CKS1B-205ENST00000473344 C7orf43Q8WVR3 580 aa9.19□□□□□ -0.94
CKS1B-205ENST00000473344 JDP2Q8WYK2 163 aa9.19□□□□□ -0.94
CKS1B-205ENST00000473344 NYXQ9GZU5 481 aa9.19□□□□□ -0.94
CKS1B-205ENST00000473344 PASKQ96RG2 1323 aa9.19□□□□□ -0.94
CKS1B-205ENST00000473344 CCDC88AQ3V6T2 1871 aa9.19□□□□□ -0.94
CKS1B-205ENST00000473344 KLRG2A4D1S0 409 aaPredicted RBP9.18□□□□□ -0.94
CKS1B-205ENST00000473344 FOXN1O15353 648 aa9.18□□□□□ -0.94
CKS1B-205ENST00000473344 HTATSF1O43719 755 aaKnown RBP9.18□□□□□ -0.94
CKS1B-205ENST00000473344 SIPA1L3O60292 1781 aaPredicted RBP9.18□□□□□ -0.94
CKS1B-205ENST00000473344 CTCFP49711 727 aaPredicted RBP9.18□□□□□ -0.94
CKS1B-205ENST00000473344 VEGFBP49765 207 aa9.18□□□□□ -0.94
CKS1B-205ENST00000473344 DCTN1Q14203 1278 aa9.18□□□□□ -0.94
CKS1B-205ENST00000473344 RNF123Q5XPI4 1314 aa9.18□□□□□ -0.94
CKS1B-205ENST00000473344 GPC2Q8N158 579 aa9.18□□□□□ -0.94
CKS1B-205ENST00000473344 SYNE4Q8N205 404 aa9.18□□□□□ -0.94
CKS1B-205ENST00000473344 NGEFQ8N5V2 710 aa9.18□□□□□ -0.94
CKS1B-205ENST00000473344 ZNF541Q9H0D2 1346 aa9.18□□□□□ -0.94
CKS1B-205ENST00000473344 PRDM10Q9NQV6 1147 aa9.18□□□□□ -0.94
CKS1B-205ENST00000473344 SLX4Q8IY92 1834 aa9.17□□□□□ -0.94
CKS1B-205ENST00000473344 BCORQ6W2J9 1755 aa9.17□□□□□ -0.94
CKS1B-205ENST00000473344 NBPF26B4DH59 902 aa9.17□□□□□ -0.94
CKS1B-205ENST00000473344 ITGBL1O95965 494 aaPredicted RBP9.17□□□□□ -0.94
CKS1B-205ENST00000473344 LMOD1P29536 600 aaPredicted RBP9.17□□□□□ -0.94
CKS1B-205ENST00000473344 EIF6P56537 245 aaKnown RBP9.17□□□□□ -0.94
CKS1B-205ENST00000473344 TAF7Q15545 349 aaPredicted RBP9.17□□□□□ -0.94
CKS1B-205ENST00000473344 HLFQ16534 295 aa9.17□□□□□ -0.94
CKS1B-205ENST00000473344 DEFB115Q30KQ5 88 aa9.17□□□□□ -0.94
CKS1B-205ENST00000473344 MAP1SQ66K74 1059 aaPredicted RBP9.17□□□□□ -0.94
CKS1B-205ENST00000473344 NBPF10Q6P3W6 841 aaKnown RBP9.17□□□□□ -0.94
CKS1B-205ENST00000473344 OLFM4Q6UX06 510 aa9.17□□□□□ -0.94
CKS1B-205ENST00000473344 KIF6Q6ZMV9 814 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms