RNA–Protein interactions for RNA: ENST00000472988.5

SMARCD3-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,654 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-209ENST00000472988 PNMA6EA0A0J9YXQ4 647 aa23.97■■□□□ 1.43
SMARCD3-209ENST00000472988 ATP8B2P98198 1209 aa23.97■■□□□ 1.43
SMARCD3-209ENST00000472988 EN1Q05925 392 aaPredicted RBP23.97■■□□□ 1.43
SMARCD3-209ENST00000472988 ZNF827Q17R98 1081 aa23.97■■□□□ 1.43
SMARCD3-209ENST00000472988 CAMKK2Q96RR4 588 aa23.97■■□□□ 1.43
SMARCD3-209ENST00000472988 ZNF652Q9Y2D9 606 aa23.97■■□□□ 1.43
SMARCD3-209ENST00000472988 QSER1Q2KHR3 1735 aa23.97■■□□□ 1.43
SMARCD3-209ENST00000472988 USP42Q9H9J4 1324 aaKnown RBP23.97■■□□□ 1.43
SMARCD3-209ENST00000472988 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.96■■□□□ 1.43
SMARCD3-209ENST00000472988 RGL2O15211 777 aa23.96■■□□□ 1.43
SMARCD3-209ENST00000472988 ADRA2BP18089 450 aa23.96■■□□□ 1.43
SMARCD3-209ENST00000472988 HMGB2P26583 209 aaKnown RBP23.96■■□□□ 1.43
SMARCD3-209ENST00000472988 EZH2Q15910 746 aaKnown RBP23.96■■□□□ 1.43
SMARCD3-209ENST00000472988 TRAPPC3LQ5T215 181 aa23.96■■□□□ 1.43
SMARCD3-209ENST00000472988 USPL1Q5W0Q7 1092 aa23.96■■□□□ 1.43
SMARCD3-209ENST00000472988 SMC5Q8IY18 1101 aa23.96■■□□□ 1.43
SMARCD3-209ENST00000472988 HDAC5Q9UQL6 1122 aa23.96■■□□□ 1.43
SMARCD3-209ENST00000472988 RTL5Q5HYW3 569 aaPredicted RBP23.95■■□□□ 1.43
SMARCD3-209ENST00000472988 CLEC4GQ6UXB4 293 aa23.95■■□□□ 1.43
SMARCD3-209ENST00000472988 AKT1S1Q96B36 256 aa23.95■■□□□ 1.43
SMARCD3-209ENST00000472988 BICC1Q9H694 974 aaKnown RBP23.95■■□□□ 1.43
SMARCD3-209ENST00000472988 SSFA2P28290 1259 aa23.95■■□□□ 1.42
SMARCD3-209ENST00000472988 EPHA10Q5JZY3 1008 aa23.95■■□□□ 1.42
SMARCD3-209ENST00000472988 PCCAP05165 728 aaPredicted RBP23.94■■□□□ 1.42
SMARCD3-209ENST00000472988 MTX1Q13505 466 aa23.94■■□□□ 1.42
SMARCD3-209ENST00000472988 PPP1R42Q7Z4L9 355 aa23.94■■□□□ 1.42
SMARCD3-209ENST00000472988 ZPR1O75312 459 aa23.93■■□□□ 1.42
SMARCD3-209ENST00000472988 HMMRO75330 724 aa23.93■■□□□ 1.42
SMARCD3-209ENST00000472988 RFC4P35249 363 aa23.93■■□□□ 1.42
SMARCD3-209ENST00000472988 SKAP1Q86WV1 359 aa23.93■■□□□ 1.42
SMARCD3-209ENST00000472988 ZBTB38Q8NAP3 1195 aaPredicted RBP23.93■■□□□ 1.42
SMARCD3-209ENST00000472988 NIP7Q9Y221 180 aaKnown RBP eCLIP23.93■■□□□ 1.42
SMARCD3-209ENST00000472988 SF3B2Q13435 895 aaKnown RBP23.92■■□□□ 1.42
SMARCD3-209ENST00000472988 POLA2Q14181 598 aa23.92■■□□□ 1.42
SMARCD3-209ENST00000472988 SSH3Q8TE77 659 aa23.92■■□□□ 1.42
SMARCD3-209ENST00000472988 SRGAP3O43295 1099 aa23.92■■□□□ 1.42
SMARCD3-209ENST00000472988 SUSD4Q5VX71 490 aa23.92■■□□□ 1.42
SMARCD3-209ENST00000472988 FAM89AQ96GI7 184 aa23.92■■□□□ 1.42
SMARCD3-209ENST00000472988 DCTPP1Q9H773 170 aa23.92■■□□□ 1.42
SMARCD3-209ENST00000472988 BAG6P46379 1132 aa23.91■■□□□ 1.42
SMARCD3-209ENST00000472988 RABL6Q3YEC7 729 aaPredicted RBP23.91■■□□□ 1.42
SMARCD3-209ENST00000472988 PARP10Q53GL7 1025 aa23.91■■□□□ 1.42
SMARCD3-209ENST00000472988 TBC1D9BQ66K14 1250 aa23.91■■□□□ 1.42
SMARCD3-209ENST00000472988 DEFB132Q7Z7B7 95 aa23.91■■□□□ 1.42
SMARCD3-209ENST00000472988 GCC1Q96CN9 775 aa23.91■■□□□ 1.42
SMARCD3-209ENST00000472988 CDHR2Q9BYE9 1310 aa23.91■■□□□ 1.42
SMARCD3-209ENST00000472988 FOXO4P98177 505 aa23.89■■□□□ 1.42
SMARCD3-209ENST00000472988 SYNE4Q8N205 404 aa23.89■■□□□ 1.42
SMARCD3-209ENST00000472988 TFCP2L1Q9NZI6 479 aa23.89■■□□□ 1.42
SMARCD3-209ENST00000472988 TRMT112Q9UI30 125 aaKnown RBP23.89■■□□□ 1.42
SMARCD3-209ENST00000472988 PDZRN3Q9UPQ7 1066 aa23.89■■□□□ 1.42
SMARCD3-209ENST00000472988 NTSR2O95665 410 aa23.88■■□□□ 1.41
SMARCD3-209ENST00000472988 ANO8Q9HCE9 1232 aaPredicted RBP23.88■■□□□ 1.41
SMARCD3-209ENST00000472988 FAM177BA6PVY3 158 aa23.87■■□□□ 1.41
SMARCD3-209ENST00000472988 BICDL1Q6ZP65 573 aa23.87■■□□□ 1.41
SMARCD3-209ENST00000472988 UTP14AQ9BVJ6 771 aaKnown RBP23.87■■□□□ 1.41
SMARCD3-209ENST00000472988 PLA2G12BQ9BX93 195 aa23.86■■□□□ 1.41
SMARCD3-209ENST00000472988 SH3TC1Q8TE82 1336 aa23.86■■□□□ 1.41
SMARCD3-209ENST00000472988 EXOC6BQ9Y2D4 811 aa23.86■■□□□ 1.41
SMARCD3-209ENST00000472988 PNPLA7Q6ZV29 1317 aa23.85■■□□□ 1.41
SMARCD3-209ENST00000472988 GYS1P13807 737 aa23.85■■□□□ 1.41
SMARCD3-209ENST00000472988 NUCB1Q02818 461 aa23.85■■□□□ 1.41
SMARCD3-209ENST00000472988 LMBR1LQ6UX01 489 aa23.85■■□□□ 1.41
SMARCD3-209ENST00000472988 IRS4O14654 1257 aaPredicted RBP23.84■■□□□ 1.41
SMARCD3-209ENST00000472988 COL23A1Q86Y22 540 aaPredicted RBP23.84■■□□□ 1.41
SMARCD3-209ENST00000472988 CCDC125Q86Z20 511 aa23.84■■□□□ 1.41
SMARCD3-209ENST00000472988 SETDB2Q96T68 719 aa23.83■■□□□ 1.41
SMARCD3-209ENST00000472988 ANKRD45Q5TZF3 282 aa23.83■■□□□ 1.4
SMARCD3-209ENST00000472988 NUTM1Q86Y26 1132 aa23.83■■□□□ 1.4
SMARCD3-209ENST00000472988 TNRC6CQ9HCJ0 1690 aaKnown RBP23.82■■□□□ 1.4
SMARCD3-209ENST00000472988 SPEF2Q9C093 1822 aa23.82■■□□□ 1.4
SMARCD3-209ENST00000472988 RFX5P48382 616 aaPredicted RBP23.82■■□□□ 1.4
SMARCD3-209ENST00000472988 NFIXQ14938 502 aa23.82■■□□□ 1.4
SMARCD3-209ENST00000472988 CHD1LQ86WJ1 897 aa23.82■■□□□ 1.4
SMARCD3-209ENST00000472988 PA2G4Q9UQ80 394 aaKnown RBP23.82■■□□□ 1.4
SMARCD3-209ENST00000472988 SURF6O75683 361 aaKnown RBP23.81■■□□□ 1.4
SMARCD3-209ENST00000472988 SLC15A2Q16348 729 aa23.81■■□□□ 1.4
SMARCD3-209ENST00000472988 LNPKQ9C0E8 428 aa23.81■■□□□ 1.4
SMARCD3-209ENST00000472988 CARMIL3Q8ND23 1372 aa23.81■■□□□ 1.4
SMARCD3-209ENST00000472988 ABCC12Q96J65 1359 aa23.81■■□□□ 1.4
SMARCD3-209ENST00000472988 APBB1O00213 710 aa23.8■■□□□ 1.4
SMARCD3-209ENST00000472988 PDE8AO60658 829 aa23.8■■□□□ 1.4
SMARCD3-209ENST00000472988 CTSWP56202 376 aa23.8■■□□□ 1.4
SMARCD3-209ENST00000472988 FLAD1Q8NFF5 587 aa23.8■■□□□ 1.4
SMARCD3-209ENST00000472988 KLHDC4Q8TBB5 520 aa23.8■■□□□ 1.4
SMARCD3-209ENST00000472988 STK32BQ9NY57 414 aa23.8■■□□□ 1.4
SMARCD3-209ENST00000472988 NOP58Q9Y2X3 529 aaKnown RBP23.8■■□□□ 1.4
SMARCD3-209ENST00000472988 CHMP3Q9Y3E7 222 aa23.8■■□□□ 1.4
SMARCD3-209ENST00000472988 CSF1RP07333 972 aa23.79■■□□□ 1.4
SMARCD3-209ENST00000472988 HCLS1P14317 486 aaPredicted RBP23.79■■□□□ 1.4
SMARCD3-209ENST00000472988 PDE4AP27815 886 aa23.79■■□□□ 1.4
SMARCD3-209ENST00000472988 NRXN2Q9P2S2 1712 aa23.79■■□□□ 1.4
SMARCD3-209ENST00000472988 RGS3P49796 1198 aa23.79■■□□□ 1.4
SMARCD3-209ENST00000472988 FAM161AQ3B820 660 aa23.79■■□□□ 1.4
SMARCD3-209ENST00000472988 ERFEQ4G0M1 354 aa23.79■■□□□ 1.4
SMARCD3-209ENST00000472988 NBPF5PQ86XG9 351 aaPredicted RBP23.78■■□□□ 1.4
SMARCD3-209ENST00000472988 TTLL11Q8NHH1 800 aa23.78■■□□□ 1.4
SMARCD3-209ENST00000472988 NYXQ9GZU5 481 aa23.78■■□□□ 1.4
SMARCD3-209ENST00000472988 LRP5O75197 1615 aa23.78■■□□□ 1.4
SMARCD3-209ENST00000472988 MSH5O43196 834 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms