RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 FKBP5Q13451 457 aaPredicted RBP9.44□□□□□ -0.9
CCDC171-205ENST00000472806 KRT24Q2M2I5 525 aa9.44□□□□□ -0.9
CCDC171-205ENST00000472806 KRT28Q7Z3Y7 464 aa9.44□□□□□ -0.9
CCDC171-205ENST00000472806 ARHGEF25Q86VW2 580 aa9.44□□□□□ -0.9
CCDC171-205ENST00000472806 IL17REQ8NFR9 667 aa9.44□□□□□ -0.9
CCDC171-205ENST00000472806 PRKD2Q9BZL6 878 aa9.44□□□□□ -0.9
CCDC171-205ENST00000472806 IL21Q9HBE4 155 aa9.44□□□□□ -0.9
CCDC171-205ENST00000472806 ATP10DQ9P241 1426 aa9.44□□□□□ -0.9
CCDC171-205ENST00000472806 C1orf167Q5SNV9 1468 aa9.44□□□□□ -0.9
CCDC171-205ENST00000472806 LMO7Q8WWI1 1683 aa9.44□□□□□ -0.9
CCDC171-205ENST00000472806 MED1Q15648 1581 aaPredicted RBP9.43□□□□□ -0.9
CCDC171-205ENST00000472806 ABCC6O95255 1503 aa9.43□□□□□ -0.9
CCDC171-205ENST00000472806 COPS2P61201 443 aa9.43□□□□□ -0.9
CCDC171-205ENST00000472806 NFKBIBQ15653 356 aa9.43□□□□□ -0.9
CCDC171-205ENST00000472806 HDGFL1Q5TGJ6 251 aa9.43□□□□□ -0.9
CCDC171-205ENST00000472806 ZNF530Q6P9A1 599 aaPredicted RBP9.43□□□□□ -0.9
CCDC171-205ENST00000472806 SLC4A10Q6U841 1118 aa9.43□□□□□ -0.9
CCDC171-205ENST00000472806 SNX21Q969T3 373 aa9.43□□□□□ -0.9
CCDC171-205ENST00000472806 MIS18AQ9NYP9 233 aa9.43□□□□□ -0.9
CCDC171-205ENST00000472806 N4BP2Q86UW6 1770 aaPredicted RBP9.42□□□□□ -0.9
CCDC171-205ENST00000472806 TRPM3Q9HCF6 1732 aaPredicted RBP9.42□□□□□ -0.9
CCDC171-205ENST00000472806 CAMTA1Q9Y6Y1 1673 aa9.42□□□□□ -0.9
CCDC171-205ENST00000472806 ZBTB7CA1YPR0 619 aa9.42□□□□□ -0.9
CCDC171-205ENST00000472806 GFRA3O60609 400 aa9.42□□□□□ -0.9
CCDC171-205ENST00000472806 TTC22Q5TAA0 569 aa9.42□□□□□ -0.9
CCDC171-205ENST00000472806 NBPF6Q5VWK0 638 aa9.42□□□□□ -0.9
CCDC171-205ENST00000472806 ANKRD24Q8TF21 1146 aa9.42□□□□□ -0.9
CCDC171-205ENST00000472806 NBPF4Q96M43 638 aa9.42□□□□□ -0.9
CCDC171-205ENST00000472806 MEIS3Q99687 375 aa9.42□□□□□ -0.9
CCDC171-205ENST00000472806 LMOD2Q6P5Q4 547 aa9.41□□□□□ -0.9
CCDC171-205ENST00000472806 PLEKHM2Q8IWE5 1019 aa9.41□□□□□ -0.9
CCDC171-205ENST00000472806 USHBP1Q8N6Y0 703 aa9.41□□□□□ -0.9
CCDC171-205ENST00000472806 ORAI2Q96SN7 254 aa9.41□□□□□ -0.9
CCDC171-205ENST00000472806 TBC1D2Q9BYX2 928 aa9.41□□□□□ -0.9
CCDC171-205ENST00000472806 RBM27Q9P2N5 1060 aaKnown RBP9.41□□□□□ -0.9
CCDC171-205ENST00000472806 KDM3BQ7LBC6 1761 aa9.4□□□□□ -0.9
CCDC171-205ENST00000472806 NPHP3Q7Z494 1330 aa9.4□□□□□ -0.9
CCDC171-205ENST00000472806 BTBD11A6QL63 1104 aa9.4□□□□□ -0.9
CCDC171-205ENST00000472806 UBTFL1P0CB47 393 aaPredicted RBP9.4□□□□□ -0.9
CCDC171-205ENST00000472806 EIF4A1P60842 406 aaKnown RBP9.4□□□□□ -0.9
CCDC171-205ENST00000472806 ATP8B2P98198 1209 aa9.4□□□□□ -0.9
CCDC171-205ENST00000472806 TBC1D9Q6ZT07 1266 aa9.4□□□□□ -0.9
CCDC171-205ENST00000472806 G2E3Q7L622 706 aa9.4□□□□□ -0.9
CCDC171-205ENST00000472806 IL27Q8NEV9 243 aa9.4□□□□□ -0.9
CCDC171-205ENST00000472806 KCNV2Q8TDN2 545 aa9.4□□□□□ -0.9
CCDC171-205ENST00000472806 SRCIN1Q9C0H9 1055 aa9.4□□□□□ -0.9
CCDC171-205ENST00000472806 OSBPL3Q9H4L5 887 aa9.4□□□□□ -0.9
CCDC171-205ENST00000472806 CHMP5Q9NZZ3 219 aa9.4□□□□□ -0.9
CCDC171-205ENST00000472806 RNMTO43148 476 aaKnown RBP9.39□□□□□ -0.91
CCDC171-205ENST00000472806 RAB11FIP3O75154 756 aa9.39□□□□□ -0.91
CCDC171-205ENST00000472806 REC8O95072 547 aa9.39□□□□□ -0.91
CCDC171-205ENST00000472806 PTMSP20962 102 aa9.39□□□□□ -0.91
CCDC171-205ENST00000472806 HSP90AB4PQ58FF6 505 aa9.39□□□□□ -0.91
CCDC171-205ENST00000472806 RAPGEF4Q8WZA2 1011 aa9.39□□□□□ -0.91
CCDC171-205ENST00000472806 ALS2Q96Q42 1657 aa9.39□□□□□ -0.91
CCDC171-205ENST00000472806 AOX1Q06278 1338 aa9.38□□□□□ -0.91
CCDC171-205ENST00000472806 F6X3S4 739 aa9.38□□□□□ -0.91
CCDC171-205ENST00000472806 TATP17735 454 aaPredicted RBP9.38□□□□□ -0.91
CCDC171-205ENST00000472806 LRRCC1Q9C099 1032 aa9.38□□□□□ -0.91
CCDC171-205ENST00000472806 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.38□□□□□ -0.91
CCDC171-205ENST00000472806 DBF4Q9UBU7 674 aaPredicted RBP9.38□□□□□ -0.91
CCDC171-205ENST00000472806 SPG7Q9UQ90 795 aa9.38□□□□□ -0.91
CCDC171-205ENST00000472806 TMEM94Q12767 1356 aa9.37□□□□□ -0.91
CCDC171-205ENST00000472806 DDX58O95786 925 aaKnown RBP9.37□□□□□ -0.91
CCDC171-205ENST00000472806 HSP90AB1P08238 724 aaKnown RBP9.37□□□□□ -0.91
CCDC171-205ENST00000472806 RABEP1Q15276 862 aa9.37□□□□□ -0.91
CCDC171-205ENST00000472806 SLKQ9H2G2 1235 aaPredicted RBP9.37□□□□□ -0.91
CCDC171-205ENST00000472806 ALDH1L1O75891 902 aa9.36□□□□□ -0.91
CCDC171-205ENST00000472806 GSPT1P15170 499 aaKnown RBP9.36□□□□□ -0.91
CCDC171-205ENST00000472806 EIF2S2P20042 333 aaKnown RBP9.36□□□□□ -0.91
CCDC171-205ENST00000472806 MCCP23508 829 aa9.36□□□□□ -0.91
CCDC171-205ENST00000472806 DNAAF4Q8WXU2 420 aa9.36□□□□□ -0.91
CCDC171-205ENST00000472806 LRRC59Q96AG4 307 aaKnown RBP9.36□□□□□ -0.91
CCDC171-205ENST00000472806 ANTXR1Q9H6X2 564 aa9.36□□□□□ -0.91
CCDC171-205ENST00000472806 LGR6Q9HBX8 967 aa9.36□□□□□ -0.91
CCDC171-205ENST00000472806 HYPKQ9NX55 129 aa9.36□□□□□ -0.91
CCDC171-205ENST00000472806 TNS3Q68CZ2 1445 aa9.36□□□□□ -0.91
CCDC171-205ENST00000472806 IBTKQ9P2D0 1353 aaPredicted RBP9.36□□□□□ -0.91
CCDC171-205ENST00000472806 ADAMTS7Q9UKP4 1686 aa9.36□□□□□ -0.91
CCDC171-205ENST00000472806 ERC2O15083 957 aa9.35□□□□□ -0.91
CCDC171-205ENST00000472806 EPB41L2O43491 1005 aaKnown RBP9.35□□□□□ -0.91
CCDC171-205ENST00000472806 HSP90AA1P07900 732 aaKnown RBP9.35□□□□□ -0.91
CCDC171-205ENST00000472806 PDE1AP54750 535 aa9.35□□□□□ -0.91
CCDC171-205ENST00000472806 XPCQ01831 940 aaPredicted RBP9.35□□□□□ -0.91
CCDC171-205ENST00000472806 MPRIPQ6WCQ1 1025 aa9.35□□□□□ -0.91
CCDC171-205ENST00000472806 SSH3Q8TE77 659 aa9.35□□□□□ -0.91
CCDC171-205ENST00000472806 NECTIN2Q92692 538 aa9.35□□□□□ -0.91
CCDC171-205ENST00000472806 RGPD2P0DJD1 1756 aa9.35□□□□□ -0.91
CCDC171-205ENST00000472806 DDX11L8A8MPP1 907 aa9.34□□□□□ -0.91
CCDC171-205ENST00000472806 K7ELQ4 463 aaPredicted RBP9.34□□□□□ -0.91
CCDC171-205ENST00000472806 APBB1O00213 710 aa9.34□□□□□ -0.91
CCDC171-205ENST00000472806 FRAT2O75474 233 aaPredicted RBP9.34□□□□□ -0.91
CCDC171-205ENST00000472806 CSB-PGBD3P0DP91 1061 aa9.34□□□□□ -0.91
CCDC171-205ENST00000472806 SDSP20132 328 aa9.34□□□□□ -0.91
CCDC171-205ENST00000472806 MX1P20591 662 aa9.34□□□□□ -0.91
CCDC171-205ENST00000472806 TRAF7Q6Q0C0 670 aa9.34□□□□□ -0.91
CCDC171-205ENST00000472806 ERC1Q8IUD2 1116 aa9.34□□□□□ -0.91
CCDC171-205ENST00000472806 IFNL2Q8IZJ0 200 aa9.34□□□□□ -0.91
CCDC171-205ENST00000472806 EMID1Q96A84 441 aaPredicted RBP9.34□□□□□ -0.91
CCDC171-205ENST00000472806 USP44Q9H0E7 712 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms