RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 NFATC2IPQ8NCF5 419 aa5.4□□□□□ -1.54
XRN1-209ENST00000472625 NANOS1Q8WY41 292 aaKnown RBP5.4□□□□□ -1.54
XRN1-209ENST00000472625 GLMNQ92990 594 aa5.4□□□□□ -1.54
XRN1-209ENST00000472625 GRIP2Q9C0E4 1043 aa5.4□□□□□ -1.54
XRN1-209ENST00000472625 SLC52A1Q9NWF4 448 aa5.4□□□□□ -1.54
XRN1-209ENST00000472625 CROCC2H7BZ55 1655 aa5.4□□□□□ -1.55
XRN1-209ENST00000472625 UBR1Q8IWV7 1749 aa5.4□□□□□ -1.55
XRN1-209ENST00000472625 DAPK1P53355 1430 aa5.4□□□□□ -1.55
XRN1-209ENST00000472625 FAM135BQ49AJ0 1406 aa5.4□□□□□ -1.55
XRN1-209ENST00000472625 FGD6Q6ZV73 1430 aa5.4□□□□□ -1.55
XRN1-209ENST00000472625 ADGRB3O60242 1522 aa5.39□□□□□ -1.55
XRN1-209ENST00000472625 PTPN23Q9H3S7 1636 aa5.39□□□□□ -1.55
XRN1-209ENST00000472625 GAS6Q14393 721 aa5.39□□□□□ -1.55
XRN1-209ENST00000472625 SLFNL1Q499Z3 407 aa5.39□□□□□ -1.55
XRN1-209ENST00000472625 SLC27A3Q5K4L6 730 aa5.39□□□□□ -1.55
XRN1-209ENST00000472625 ZNF385CQ66K41 422 aaPredicted RBP5.39□□□□□ -1.55
XRN1-209ENST00000472625 RIPOR1Q6ZS17 1223 aa5.39□□□□□ -1.55
XRN1-209ENST00000472625 ZNF592Q92610 1267 aa5.39□□□□□ -1.55
XRN1-209ENST00000472625 NLRP3Q96P20 1036 aa5.39□□□□□ -1.55
XRN1-209ENST00000472625 GAS2L1Q99501 681 aaPredicted RBP5.39□□□□□ -1.55
XRN1-209ENST00000472625 DOLKQ9UPQ8 538 aa5.39□□□□□ -1.55
XRN1-209ENST00000472625 KIAA1024Q9UPX6 916 aa5.39□□□□□ -1.55
XRN1-209ENST00000472625 GTF3C3Q9Y5Q9 886 aa5.39□□□□□ -1.55
XRN1-209ENST00000472625 ZBTB7BO15156 539 aaPredicted RBP5.38□□□□□ -1.55
XRN1-209ENST00000472625 RAD21O60216 631 aa5.38□□□□□ -1.55
XRN1-209ENST00000472625 THBS1P07996 1170 aa5.38□□□□□ -1.55
XRN1-209ENST00000472625 MAP7D1Q3KQU3 841 aa5.38□□□□□ -1.55
XRN1-209ENST00000472625 CYP2U1Q7Z449 544 aa5.38□□□□□ -1.55
XRN1-209ENST00000472625 SVOPQ8N4V2 548 aa5.38□□□□□ -1.55
XRN1-209ENST00000472625 ZNF837Q96EG3 531 aaPredicted RBP5.38□□□□□ -1.55
XRN1-209ENST00000472625 XAGE2Q96GT9 111 aa5.38□□□□□ -1.55
XRN1-209ENST00000472625 MSH6P52701 1360 aa5.38□□□□□ -1.55
XRN1-209ENST00000472625 ABCC5O15440 1437 aa5.38□□□□□ -1.55
XRN1-209ENST00000472625 NCOA3Q9Y6Q9 1424 aa5.38□□□□□ -1.55
XRN1-209ENST00000472625 ADGRL2O95490 1459 aa5.38□□□□□ -1.55
XRN1-209ENST00000472625 USP17L5A8MUK1 530 aa5.37□□□□□ -1.55
XRN1-209ENST00000472625 WASLO00401 505 aaPredicted RBP5.37□□□□□ -1.55
XRN1-209ENST00000472625 PPP1R15AO75807 674 aaPredicted RBP5.37□□□□□ -1.55
XRN1-209ENST00000472625 GNRH1P01148 92 aa5.37□□□□□ -1.55
XRN1-209ENST00000472625 KCNA6P17658 529 aa5.37□□□□□ -1.55
XRN1-209ENST00000472625 PHKA2P46019 1235 aa5.37□□□□□ -1.55
XRN1-209ENST00000472625 CLDN10P78369 228 aa5.37□□□□□ -1.55
XRN1-209ENST00000472625 NCOA4Q13772 614 aa5.37□□□□□ -1.55
XRN1-209ENST00000472625 OXLD1Q5BKU9 147 aa5.37□□□□□ -1.55
XRN1-209ENST00000472625 PLEKHM2Q8IWE5 1019 aa5.37□□□□□ -1.55
XRN1-209ENST00000472625 DEPDC4Q8N2C3 294 aa5.37□□□□□ -1.55
XRN1-209ENST00000472625 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.37□□□□□ -1.55
XRN1-209ENST00000472625 USP3Q9Y6I4 520 aa5.37□□□□□ -1.55
XRN1-209ENST00000472625 TMEM94Q12767 1356 aa5.37□□□□□ -1.55
XRN1-209ENST00000472625 NOS1P29475 1434 aa5.37□□□□□ -1.55
XRN1-209ENST00000472625 NWD1Q149M9 1564 aa5.37□□□□□ -1.55
XRN1-209ENST00000472625 CEP152O94986 1710 aa5.37□□□□□ -1.55
XRN1-209ENST00000472625 ATP9BO43861 1147 aa5.36□□□□□ -1.55
XRN1-209ENST00000472625 ADAMTS2O95450 1211 aa5.36□□□□□ -1.55
XRN1-209ENST00000472625 SKIP12755 728 aa5.36□□□□□ -1.55
XRN1-209ENST00000472625 GPC1P35052 558 aa5.36□□□□□ -1.55
XRN1-209ENST00000472625 SRPK2P78362 688 aaKnown RBP5.36□□□□□ -1.55
XRN1-209ENST00000472625 DBN1Q16643 649 aa5.36□□□□□ -1.55
XRN1-209ENST00000472625 CFAP70Q5T0N1 1121 aa5.36□□□□□ -1.55
XRN1-209ENST00000472625 NBPF10Q6P3W6 841 aaKnown RBP5.36□□□□□ -1.55
XRN1-209ENST00000472625 NBPF15Q8N660 670 aa5.36□□□□□ -1.55
XRN1-209ENST00000472625 GTPBP3Q969Y2 492 aaKnown RBP5.36□□□□□ -1.55
XRN1-209ENST00000472625 ESYT1Q9BSJ8 1104 aa5.36□□□□□ -1.55
XRN1-209ENST00000472625 RRP7BPQ9NSQ0 103 aa5.36□□□□□ -1.55
XRN1-209ENST00000472625 ADAMTS8Q9UP79 889 aa5.36□□□□□ -1.55
XRN1-209ENST00000472625 IQSEC3Q9UPP2 1182 aaPredicted RBP5.36□□□□□ -1.55
XRN1-209ENST00000472625 PIK3R4Q99570 1358 aa5.36□□□□□ -1.55
XRN1-209ENST00000472625 PLEKHG1Q9ULL1 1385 aa5.36□□□□□ -1.55
XRN1-209ENST00000472625 ANKRD50Q9ULJ7 1429 aa5.36□□□□□ -1.55
XRN1-209ENST00000472625 DIP2AQ14689 1571 aa5.36□□□□□ -1.55
XRN1-209ENST00000472625 PIK3C2BO00750 1634 aa5.36□□□□□ -1.55
XRN1-209ENST00000472625 ALKQ9UM73 1620 aa5.36□□□□□ -1.55
XRN1-209ENST00000472625 JCADQ9P266 1359 aa5.35□□□□□ -1.55
XRN1-209ENST00000472625 USP17L3A6NCW0 530 aa5.35□□□□□ -1.55
XRN1-209ENST00000472625 USP17L4A6NCW7 530 aa5.35□□□□□ -1.55
XRN1-209ENST00000472625 SPATA31C2B4DYI2 1134 aa5.35□□□□□ -1.55
XRN1-209ENST00000472625 LTKP29376 864 aa5.35□□□□□ -1.55
XRN1-209ENST00000472625 EPHA4P54764 986 aa5.35□□□□□ -1.55
XRN1-209ENST00000472625 CENPCQ03188 943 aa5.35□□□□□ -1.55
XRN1-209ENST00000472625 USP4Q13107 963 aa5.35□□□□□ -1.55
XRN1-209ENST00000472625 KANK4Q5T7N3 995 aaPredicted RBP5.35□□□□□ -1.55
XRN1-209ENST00000472625 USP17L2Q6R6M4 530 aa5.35□□□□□ -1.55
XRN1-209ENST00000472625 LYPD4Q6UWN0 246 aa5.35□□□□□ -1.55
XRN1-209ENST00000472625 USP17L1Q7RTZ2 530 aa5.35□□□□□ -1.55
XRN1-209ENST00000472625 CNKSR1Q969H4 720 aa5.35□□□□□ -1.55
XRN1-209ENST00000472625 GPAMQ9HCL2 828 aa5.35□□□□□ -1.55
XRN1-209ENST00000472625 MAFBQ9Y5Q3 323 aaPredicted RBP5.35□□□□□ -1.55
XRN1-209ENST00000472625 ROCK1Q13464 1354 aa5.34□□□□□ -1.55
XRN1-209ENST00000472625 SPATA31A6Q5VVP1 1343 aa5.34□□□□□ -1.55
XRN1-209ENST00000472625 PALM3A6NDB9 673 aaPredicted RBP5.34□□□□□ -1.55
XRN1-209ENST00000472625 MYCP01106 439 aaPredicted RBP5.34□□□□□ -1.55
XRN1-209ENST00000472625 INHAP05111 366 aa5.34□□□□□ -1.55
XRN1-209ENST00000472625 SLURP2P0DP57 97 aa5.34□□□□□ -1.55
XRN1-209ENST00000472625 GSK3AP49840 483 aa5.34□□□□□ -1.55
XRN1-209ENST00000472625 IDI1Q13907 227 aa5.34□□□□□ -1.55
XRN1-209ENST00000472625 UBAP2LQ14157 1087 aaKnown RBP5.34□□□□□ -1.55
XRN1-209ENST00000472625 MTFR1Q15390 333 aa5.34□□□□□ -1.55
XRN1-209ENST00000472625 TRIM22Q8IYM9 498 aa5.34□□□□□ -1.55
XRN1-209ENST00000472625 PPP1R12CQ9BZL4 782 aa5.34□□□□□ -1.55
XRN1-209ENST00000472625 ZMYND15Q9H091 742 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms