RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 UTP14AQ9BVJ6 771 aaKnown RBP21.24■□□□□ 0.99
CCM2-205ENST00000472223 MTFR1LQ9H019 292 aa21.24■□□□□ 0.99
CCM2-205ENST00000472223 TRMT112Q9UI30 125 aaKnown RBP21.24■□□□□ 0.99
CCM2-205ENST00000472223 DDX19BQ9UMR2 479 aa21.24■□□□□ 0.99
CCM2-205ENST00000472223 CARMIL3Q8ND23 1372 aa21.23■□□□□ 0.99
CCM2-205ENST00000472223 FAM177BA6PVY3 158 aa21.23■□□□□ 0.99
CCM2-205ENST00000472223 IGKV5-2P06315 115 aa21.23■□□□□ 0.99
CCM2-205ENST00000472223 NFIXQ14938 502 aa21.23■□□□□ 0.99
CCM2-205ENST00000472223 NLRP10Q86W26 655 aa21.23■□□□□ 0.99
CCM2-205ENST00000472223 TNNQ9UQP3 1299 aa21.23■□□□□ 0.99
CCM2-205ENST00000472223 TM4SF1P30408 202 aa21.22■□□□□ 0.99
CCM2-205ENST00000472223 GCKRQ14397 625 aa21.22■□□□□ 0.99
CCM2-205ENST00000472223 MVPQ14764 893 aaKnown RBP21.22■□□□□ 0.99
CCM2-205ENST00000472223 COG6Q9Y2V7 657 aa21.22■□□□□ 0.99
CCM2-205ENST00000472223 ZBTB7AO95365 584 aa21.21■□□□□ 0.99
CCM2-205ENST00000472223 GNAI3P08754 354 aa21.21■□□□□ 0.99
CCM2-205ENST00000472223 MMP10P09238 476 aa21.21■□□□□ 0.99
CCM2-205ENST00000472223 RLBP1P12271 317 aa21.21■□□□□ 0.99
CCM2-205ENST00000472223 PDGFDQ9GZP0 370 aaPredicted RBP21.21■□□□□ 0.99
CCM2-205ENST00000472223 GRM8O00222 908 aa21.2■□□□□ 0.98
CCM2-205ENST00000472223 SERPINB2P05120 415 aa21.2■□□□□ 0.98
CCM2-205ENST00000472223 ST5P78524 1137 aa21.2■□□□□ 0.98
CCM2-205ENST00000472223 SUSD4Q5VX71 490 aa21.2■□□□□ 0.98
CCM2-205ENST00000472223 ZBTB38Q8NAP3 1195 aaPredicted RBP21.2■□□□□ 0.98
CCM2-205ENST00000472223 UBTFL1P0CB47 393 aaPredicted RBP21.19■□□□□ 0.98
CCM2-205ENST00000472223 C20orf194Q5TEA3 1177 aa21.19■□□□□ 0.98
CCM2-205ENST00000472223 CNBD1Q8NA66 436 aa21.19■□□□□ 0.98
CCM2-205ENST00000472223 ATF5Q9Y2D1 282 aaPredicted RBP21.19■□□□□ 0.98
CCM2-205ENST00000472223 UBN2Q6ZU65 1347 aa21.19■□□□□ 0.98
CCM2-205ENST00000472223 SH3TC1Q8TE82 1336 aa21.19■□□□□ 0.98
CCM2-205ENST00000472223 N4BP2Q86UW6 1770 aaPredicted RBP21.18■□□□□ 0.98
CCM2-205ENST00000472223 PCCAP05165 728 aaPredicted RBP21.18■□□□□ 0.98
CCM2-205ENST00000472223 IBTKQ9P2D0 1353 aaPredicted RBP21.18■□□□□ 0.98
CCM2-205ENST00000472223 CASZ1Q86V15 1759 aa21.18■□□□□ 0.98
CCM2-205ENST00000472223 POLRMTO00411 1230 aaKnown RBP21.17■□□□□ 0.98
CCM2-205ENST00000472223 UBE3BQ7Z3V4 1068 aa21.17■□□□□ 0.98
CCM2-205ENST00000472223 SPON1Q9HCB6 807 aa21.17■□□□□ 0.98
CCM2-205ENST00000472223 H7C1W4 665 aa21.16■□□□□ 0.98
CCM2-205ENST00000472223 RTL5Q5HYW3 569 aaPredicted RBP21.16■□□□□ 0.98
CCM2-205ENST00000472223 FAM89AQ96GI7 184 aa21.16■□□□□ 0.98
CCM2-205ENST00000472223 NTSR2O95665 410 aa21.15■□□□□ 0.98
CCM2-205ENST00000472223 AAMPQ13685 434 aa21.15■□□□□ 0.98
CCM2-205ENST00000472223 CRBNQ96SW2 442 aa21.15■□□□□ 0.98
CCM2-205ENST00000472223 USP44Q9H0E7 712 aa21.15■□□□□ 0.98
CCM2-205ENST00000472223 IRS4O14654 1257 aaPredicted RBP21.14■□□□□ 0.97
CCM2-205ENST00000472223 ZBTB7BO15156 539 aaPredicted RBP21.14■□□□□ 0.97
CCM2-205ENST00000472223 GNAI2P04899 355 aa21.14■□□□□ 0.97
CCM2-205ENST00000472223 IRX6P78412 446 aaPredicted RBP21.14■□□□□ 0.97
CCM2-205ENST00000472223 DDR1Q08345 913 aa21.14■□□□□ 0.97
CCM2-205ENST00000472223 CDHR2Q9BYE9 1310 aa21.13■□□□□ 0.97
CCM2-205ENST00000472223 ERFEQ4G0M1 354 aa21.13■□□□□ 0.97
CCM2-205ENST00000472223 NUTM1Q86Y26 1132 aa21.13■□□□□ 0.97
CCM2-205ENST00000472223 MEIS3Q99687 375 aa21.13■□□□□ 0.97
CCM2-205ENST00000472223 COL24A1Q17RW2 1714 aa21.12■□□□□ 0.97
CCM2-205ENST00000472223 UTYO14607 1347 aa21.12■□□□□ 0.97
CCM2-205ENST00000472223 NBPF7P0C2Y1 421 aaPredicted RBP21.12■□□□□ 0.97
CCM2-205ENST00000472223 PRR5LQ6MZQ0 368 aa21.12■□□□□ 0.97
CCM2-205ENST00000472223 JARID2Q92833 1246 aaPredicted RBP21.12■□□□□ 0.97
CCM2-205ENST00000472223 NLRP3Q96P20 1036 aa21.12■□□□□ 0.97
CCM2-205ENST00000472223 PDE8AO60658 829 aa21.11■□□□□ 0.97
CCM2-205ENST00000472223 PDE6BP35913 854 aa21.1■□□□□ 0.97
CCM2-205ENST00000472223 SLC10A5Q5PT55 438 aa21.1■□□□□ 0.97
CCM2-205ENST00000472223 BRIP1Q9BX63 1249 aa21.09■□□□□ 0.97
CCM2-205ENST00000472223 PDZRN3Q9UPQ7 1066 aa21.09■□□□□ 0.97
CCM2-205ENST00000472223 HCLS1P14317 486 aaPredicted RBP21.08■□□□□ 0.97
CCM2-205ENST00000472223 ZBTB40Q9NUA8 1239 aa21.08■□□□□ 0.97
CCM2-205ENST00000472223 PPP1R1BQ9UD71 204 aaPredicted RBP21.08■□□□□ 0.97
CCM2-205ENST00000472223 CHMP3Q9Y3E7 222 aa21.08■□□□□ 0.97
CCM2-205ENST00000472223 LRRFIP2Q9Y608 721 aaKnown RBP21.08■□□□□ 0.97
CCM2-205ENST00000472223 CCDC152Q4G0S7 254 aa21.07■□□□□ 0.96
CCM2-205ENST00000472223 CCDC24Q8N4L8 307 aa21.07■□□□□ 0.96
CCM2-205ENST00000472223 EXOC6Q8TAG9 804 aa21.07■□□□□ 0.96
CCM2-205ENST00000472223 SUCLG2Q96I99 432 aa21.07■□□□□ 0.96
CCM2-205ENST00000472223 PLA2G12BQ9BX93 195 aa21.07■□□□□ 0.96
CCM2-205ENST00000472223 CASP7P55210 303 aa21.06■□□□□ 0.96
CCM2-205ENST00000472223 SYNE4Q8N205 404 aa21.06■□□□□ 0.96
CCM2-205ENST00000472223 NRXN2Q9P2S2 1712 aa21.05■□□□□ 0.96
CCM2-205ENST00000472223 CTSWP56202 376 aa21.05■□□□□ 0.96
CCM2-205ENST00000472223 KLHL34Q8N239 644 aa21.05■□□□□ 0.96
CCM2-205ENST00000472223 RPGRQ92834 1020 aaKnown RBP21.05■□□□□ 0.96
CCM2-205ENST00000472223 MYH3P11055 1940 aa21.04■□□□□ 0.96
CCM2-205ENST00000472223 H0YIN7 160 aa21.04■□□□□ 0.96
CCM2-205ENST00000472223 LMBR1LQ6UX01 489 aa21.04■□□□□ 0.96
CCM2-205ENST00000472223 RPAP2Q8IXW5 612 aaPredicted RBP21.04■□□□□ 0.96
CCM2-205ENST00000472223 BICC1Q9H694 974 aaKnown RBP21.04■□□□□ 0.96
CCM2-205ENST00000472223 RIC1Q4ADV7 1423 aa21.04■□□□□ 0.96
CCM2-205ENST00000472223 ABCC12Q96J65 1359 aa21.03■□□□□ 0.96
CCM2-205ENST00000472223 HMMRO75330 724 aa21.03■□□□□ 0.96
CCM2-205ENST00000472223 PTGER2P43116 358 aa21.03■□□□□ 0.96
CCM2-205ENST00000472223 CCDC57Q2TAC2 916 aa21.03■□□□□ 0.96
CCM2-205ENST00000472223 TAF7LQ5H9L4 462 aa21.03■□□□□ 0.96
CCM2-205ENST00000472223 ERICH6BQ5W0A0 696 aa21.03■□□□□ 0.96
CCM2-205ENST00000472223 DDX46Q7L014 1031 aaKnown RBP21.03■□□□□ 0.96
CCM2-205ENST00000472223 C1orf115Q9H7X2 142 aa21.03■□□□□ 0.96
CCM2-205ENST00000472223 LAMB2P55268 1798 aa21.02■□□□□ 0.96
CCM2-205ENST00000472223 FOXO4P98177 505 aa21.02■□□□□ 0.96
CCM2-205ENST00000472223 IFIT5Q13325 482 aaKnown RBP21.02■□□□□ 0.96
CCM2-205ENST00000472223 SF3B3Q15393 1217 aaKnown RBP21.02■□□□□ 0.96
CCM2-205ENST00000472223 RBM17Q96I25 401 aaKnown RBP21.02■□□□□ 0.96
CCM2-205ENST00000472223 SGIP1Q9BQI5 828 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms