RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 TFCP2Q12800 502 aa18.19■□□□□ 0.5
UBXN11-213ENST00000472155 NMIQ13287 307 aaPredicted RBP18.19■□□□□ 0.5
UBXN11-213ENST00000472155 PRPF40BQ6NWY9 871 aaKnown RBP18.19■□□□□ 0.5
UBXN11-213ENST00000472155 IL17RAQ96F46 866 aa18.19■□□□□ 0.5
UBXN11-213ENST00000472155 ZBTB3Q9H5J0 574 aa18.19■□□□□ 0.5
UBXN11-213ENST00000472155 ARFGEF2Q9Y6D5 1785 aa18.19■□□□□ 0.5
UBXN11-213ENST00000472155 LARGE1O95461 756 aa18.19■□□□□ 0.5
UBXN11-213ENST00000472155 A0A0D9SFI3 127 aa18.19■□□□□ 0.5
UBXN11-213ENST00000472155 AK2P54819 239 aa18.19■□□□□ 0.5
UBXN11-213ENST00000472155 CASP7P55210 303 aa18.19■□□□□ 0.5
UBXN11-213ENST00000472155 TTC14Q96N46 770 aa18.19■□□□□ 0.5
UBXN11-213ENST00000472155 GRPEL1Q9HAV7 217 aa18.19■□□□□ 0.5
UBXN11-213ENST00000472155 RBM27Q9P2N5 1060 aaKnown RBP18.19■□□□□ 0.5
UBXN11-213ENST00000472155 KIAA1211Q6ZU35 1233 aa18.18■□□□□ 0.5
UBXN11-213ENST00000472155 RUFY3Q7L099 469 aa18.18■□□□□ 0.5
UBXN11-213ENST00000472155 DBNLQ9UJU6 430 aaKnown RBP18.18■□□□□ 0.5
UBXN11-213ENST00000472155 PCDH11XQ9BZA7 1347 aa18.18■□□□□ 0.5
UBXN11-213ENST00000472155 PCDH11YQ9BZA8 1340 aa18.18■□□□□ 0.5
UBXN11-213ENST00000472155 PRKCSHP14314 528 aaPredicted RBP18.18■□□□□ 0.5
UBXN11-213ENST00000472155 GPT2Q8TD30 523 aa18.18■□□□□ 0.5
UBXN11-213ENST00000472155 CASTP20810 708 aaKnown RBP18.17■□□□□ 0.5
UBXN11-213ENST00000472155 LMBR1LQ6UX01 489 aa18.17■□□□□ 0.5
UBXN11-213ENST00000472155 EVI5LQ96CN4 794 aa18.17■□□□□ 0.5
UBXN11-213ENST00000472155 ABCC6O95255 1503 aa18.17■□□□□ 0.5
UBXN11-213ENST00000472155 IL2RBP14784 551 aa18.17■□□□□ 0.5
UBXN11-213ENST00000472155 CAVIN1Q6NZI2 390 aaKnown RBP18.17■□□□□ 0.5
UBXN11-213ENST00000472155 PLBD2Q8NHP8 589 aa18.17■□□□□ 0.5
UBXN11-213ENST00000472155 GPATCH3Q96I76 525 aa18.17■□□□□ 0.5
UBXN11-213ENST00000472155 CHMP3Q9Y3E7 222 aa18.17■□□□□ 0.5
UBXN11-213ENST00000472155 ZNF330Q9Y3S2 320 aaPredicted RBP18.17■□□□□ 0.5
UBXN11-213ENST00000472155 GOLGA6L22H0YM25 854 aa18.16■□□□□ 0.5
UBXN11-213ENST00000472155 KLHL40Q2TBA0 621 aa18.16■□□□□ 0.5
UBXN11-213ENST00000472155 ZNF589Q86UQ0 364 aaPredicted RBP18.16■□□□□ 0.5
UBXN11-213ENST00000472155 HDAC5Q9UQL6 1122 aa18.16■□□□□ 0.5
UBXN11-213ENST00000472155 SKOR2Q2VWA4 1001 aaPredicted RBP18.16■□□□□ 0.5
UBXN11-213ENST00000472155 SLFNL1Q499Z3 407 aa18.16■□□□□ 0.5
UBXN11-213ENST00000472155 KAT6BQ8WYB5 2073 aa18.15■□□□□ 0.5
UBXN11-213ENST00000472155 BRD1O95696 1058 aa18.15■□□□□ 0.5
UBXN11-213ENST00000472155 MCM2P49736 904 aa18.15■□□□□ 0.5
UBXN11-213ENST00000472155 DBNDD2Q9BQY9 259 aa18.15■□□□□ 0.5
UBXN11-213ENST00000472155 GDPD2Q9HCC8 539 aa18.15■□□□□ 0.5
UBXN11-213ENST00000472155 COPRSQ9NQ92 184 aa18.15■□□□□ 0.5
UBXN11-213ENST00000472155 EVA1CP58658 441 aa18.15■□□□□ 0.5
UBXN11-213ENST00000472155 FOXO4P98177 505 aa18.15■□□□□ 0.5
UBXN11-213ENST00000472155 TCEANC2Q96MN5 208 aa18.15■□□□□ 0.5
UBXN11-213ENST00000472155 JAKMIP1Q96N16 626 aaKnown RBP18.15■□□□□ 0.5
UBXN11-213ENST00000472155 FSD1Q9BTV5 496 aa18.15■□□□□ 0.5
UBXN11-213ENST00000472155 KCPQ6ZWJ8 1503 aa18.14■□□□□ 0.5
UBXN11-213ENST00000472155 RABL6Q3YEC7 729 aaPredicted RBP18.14■□□□□ 0.49
UBXN11-213ENST00000472155 TNNI3KQ59H18 835 aa18.14■□□□□ 0.49
UBXN11-213ENST00000472155 ZNF594Q96JF6 807 aaPredicted RBP18.14■□□□□ 0.49
UBXN11-213ENST00000472155 FPGT-TNNI3KV9GXZ4 949 aa18.14■□□□□ 0.49
UBXN11-213ENST00000472155 SHANK3Q9BYB0 1731 aa18.14■□□□□ 0.49
UBXN11-213ENST00000472155 MRE11P49959 708 aa18.14■□□□□ 0.49
UBXN11-213ENST00000472155 CARD10Q9BWT7 1032 aa18.14■□□□□ 0.49
UBXN11-213ENST00000472155 RBM8AQ9Y5S9 174 aaKnown RBP18.14■□□□□ 0.49
UBXN11-213ENST00000472155 CCDC171Q6TFL3 1326 aa18.13■□□□□ 0.49
UBXN11-213ENST00000472155 NECTIN1Q15223 517 aa18.13■□□□□ 0.49
UBXN11-213ENST00000472155 ASAP1Q9ULH1 1129 aa18.13■□□□□ 0.49
UBXN11-213ENST00000472155 COL15A1P39059 1388 aa18.13■□□□□ 0.49
UBXN11-213ENST00000472155 ANO8Q9HCE9 1232 aaPredicted RBP18.13■□□□□ 0.49
UBXN11-213ENST00000472155 PARP4Q9UKK3 1724 aaKnown RBP18.12■□□□□ 0.49
UBXN11-213ENST00000472155 SEC62Q99442 399 aaKnown RBP18.12■□□□□ 0.49
UBXN11-213ENST00000472155 RRAGDQ9NQL2 400 aaPredicted RBP18.12■□□□□ 0.49
UBXN11-213ENST00000472155 ABCA3Q99758 1704 aa18.12■□□□□ 0.49
UBXN11-213ENST00000472155 TCHHQ07283 1943 aa18.12■□□□□ 0.49
UBXN11-213ENST00000472155 LAMB4A4D0S4 1761 aa18.12■□□□□ 0.49
UBXN11-213ENST00000472155 ERVV-2B6SEH9 535 aa18.12■□□□□ 0.49
UBXN11-213ENST00000472155 TPRNQ4KMQ1 711 aa18.12■□□□□ 0.49
UBXN11-213ENST00000472155 CCDC129Q6ZRS4 1044 aa18.12■□□□□ 0.49
UBXN11-213ENST00000472155 INTS4Q96HW7 963 aaKnown RBP18.12■□□□□ 0.49
UBXN11-213ENST00000472155 DNAJC2Q99543 621 aaKnown RBP18.12■□□□□ 0.49
UBXN11-213ENST00000472155 RPAP1Q9BWH6 1393 aaPredicted RBP18.11■□□□□ 0.49
UBXN11-213ENST00000472155 H7C1W4 665 aa18.11■□□□□ 0.49
UBXN11-213ENST00000472155 ST3GAL1Q11201 340 aa18.11■□□□□ 0.49
UBXN11-213ENST00000472155 CREB3L3Q68CJ9 461 aa18.11■□□□□ 0.49
UBXN11-213ENST00000472155 RUFY2Q8WXA3 655 aa18.11■□□□□ 0.49
UBXN11-213ENST00000472155 CCDC85AQ96PX6 553 aaPredicted RBP18.11■□□□□ 0.49
UBXN11-213ENST00000472155 EPB41L2O43491 1005 aaKnown RBP18.11■□□□□ 0.49
UBXN11-213ENST00000472155 NKX1-1Q15270 411 aaPredicted RBP18.11■□□□□ 0.49
UBXN11-213ENST00000472155 ZSCAN23Q3MJ62 389 aa18.1■□□□□ 0.49
UBXN11-213ENST00000472155 LRRC24Q50LG9 513 aa18.1■□□□□ 0.49
UBXN11-213ENST00000472155 TOGARAM1Q9Y4F4 1720 aa18.1■□□□□ 0.49
UBXN11-213ENST00000472155 UBR2Q8IWV8 1755 aa18.1■□□□□ 0.49
UBXN11-213ENST00000472155 TIMM10P62072 90 aa18.1■□□□□ 0.49
UBXN11-213ENST00000472155 DDX46Q7L014 1031 aaKnown RBP18.1■□□□□ 0.49
UBXN11-213ENST00000472155 ATG9AQ7Z3C6 839 aa18.1■□□□□ 0.49
UBXN11-213ENST00000472155 CCDC83Q8IWF9 413 aa18.1■□□□□ 0.49
UBXN11-213ENST00000472155 NECAB1Q8N987 351 aa18.1■□□□□ 0.49
UBXN11-213ENST00000472155 MAP4K1Q92918 833 aa18.1■□□□□ 0.49
UBXN11-213ENST00000472155 PUS3Q9BZE2 481 aaKnown RBP18.1■□□□□ 0.49
UBXN11-213ENST00000472155 BTG4Q9NY30 223 aa18.1■□□□□ 0.49
UBXN11-213ENST00000472155 TMEM63CQ9P1W3 806 aa18.1■□□□□ 0.49
UBXN11-213ENST00000472155 KCNJ4P48050 445 aa18.09■□□□□ 0.49
UBXN11-213ENST00000472155 SYNE4Q8N205 404 aa18.09■□□□□ 0.49
UBXN11-213ENST00000472155 SLC27A2O14975 620 aa18.09■□□□□ 0.49
UBXN11-213ENST00000472155 GADD45BO75293 160 aaPredicted RBP18.09■□□□□ 0.49
UBXN11-213ENST00000472155 PIGBQ92521 554 aa18.09■□□□□ 0.49
UBXN11-213ENST00000472155 PDRG1Q9NUG6 133 aa18.09■□□□□ 0.49
UBXN11-213ENST00000472155 LIMCH1Q9UPQ0 1083 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms