RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 SLC39A6Q13433 755 aa9.95□□□□□ -0.82
CD47-204ENST00000471694 AAMPQ13685 434 aa9.95□□□□□ -0.82
CD47-204ENST00000471694 FAM47CQ5HY64 1035 aa9.95□□□□□ -0.82
CD47-204ENST00000471694 LARP1BQ659C4 914 aaKnown RBP9.95□□□□□ -0.82
CD47-204ENST00000471694 GRIN2AQ12879 1464 aa9.94□□□□□ -0.82
CD47-204ENST00000471694 GOLIM4O00461 696 aa9.94□□□□□ -0.82
CD47-204ENST00000471694 STK25O00506 426 aa9.94□□□□□ -0.82
CD47-204ENST00000471694 MCM2P49736 904 aa9.94□□□□□ -0.82
CD47-204ENST00000471694 TAX1BP1Q86VP1 789 aa9.94□□□□□ -0.82
CD47-204ENST00000471694 TRIM5Q9C035 493 aa9.94□□□□□ -0.82
CD47-204ENST00000471694 PHAXQ9H814 394 aaKnown RBP9.94□□□□□ -0.82
CD47-204ENST00000471694 PCDH11XQ9BZA7 1347 aa9.94□□□□□ -0.82
CD47-204ENST00000471694 PCDH11YQ9BZA8 1340 aa9.94□□□□□ -0.82
CD47-204ENST00000471694 TAF4BQ92750 862 aa9.94□□□□□ -0.82
CD47-204ENST00000471694 BACH1O14867 736 aa9.94□□□□□ -0.82
CD47-204ENST00000471694 PPIP5K2O43314 1243 aa9.94□□□□□ -0.82
CD47-204ENST00000471694 TBCAO75347 108 aaKnown RBP9.94□□□□□ -0.82
CD47-204ENST00000471694 PLCG2P16885 1265 aa9.94□□□□□ -0.82
CD47-204ENST00000471694 C11orf95C9JLR9 678 aaPredicted RBP9.93□□□□□ -0.82
CD47-204ENST00000471694 CBX1P83916 185 aa9.93□□□□□ -0.82
CD47-204ENST00000471694 CCDC178Q5BJE1 867 aa9.93□□□□□ -0.82
CD47-204ENST00000471694 TMEM67Q5HYA8 995 aa9.93□□□□□ -0.82
CD47-204ENST00000471694 ATF5Q9Y2D1 282 aaPredicted RBP9.93□□□□□ -0.82
CD47-204ENST00000471694 HSP90B2PQ58FF3 399 aa9.93□□□□□ -0.82
CD47-204ENST00000471694 EXOC6BQ9Y2D4 811 aa9.93□□□□□ -0.82
CD47-204ENST00000471694 LETM1O95202 739 aaPredicted RBP9.93□□□□□ -0.82
CD47-204ENST00000471694 FGFR1OPO95684 399 aaKnown RBP9.93□□□□□ -0.82
CD47-204ENST00000471694 LDHBP07195 334 aaKnown RBP9.93□□□□□ -0.82
CD47-204ENST00000471694 TNNT1P13805 278 aa9.93□□□□□ -0.82
CD47-204ENST00000471694 ANKRD13DQ6ZTN6 518 aa9.93□□□□□ -0.82
CD47-204ENST00000471694 SULF1Q8IWU6 871 aa9.93□□□□□ -0.82
CD47-204ENST00000471694 OTUD6BQ8N6M0 293 aa9.93□□□□□ -0.82
CD47-204ENST00000471694 ERMNQ8TAM6 284 aa9.93□□□□□ -0.82
CD47-204ENST00000471694 GOLGA6L10A6NI86 522 aa9.93□□□□□ -0.82
CD47-204ENST00000471694 TCERG1LQ5VWI1 586 aa9.93□□□□□ -0.82
CD47-204ENST00000471694 SLC4A4Q9Y6R1 1079 aa9.93□□□□□ -0.82
CD47-204ENST00000471694 NOP56O00567 594 aaKnown RBP9.93□□□□□ -0.82
CD47-204ENST00000471694 FKBP15Q5T1M5 1219 aa9.93□□□□□ -0.82
CD47-204ENST00000471694 GADL1Q6ZQY3 521 aa9.93□□□□□ -0.82
CD47-204ENST00000471694 CACNA2D4Q7Z3S7 1137 aa9.93□□□□□ -0.82
CD47-204ENST00000471694 ERCC4Q92889 916 aaPredicted RBP9.93□□□□□ -0.82
CD47-204ENST00000471694 GGA1Q9UJY5 639 aa9.93□□□□□ -0.82
CD47-204ENST00000471694 STX6O43752 255 aa9.92□□□□□ -0.82
CD47-204ENST00000471694 ZYXQ15942 572 aaKnown RBP9.92□□□□□ -0.82
CD47-204ENST00000471694 KIAA1328Q86T90 577 aa9.92□□□□□ -0.82
CD47-204ENST00000471694 FLAD1Q8NFF5 587 aa9.92□□□□□ -0.82
CD47-204ENST00000471694 RBM27Q9P2N5 1060 aaKnown RBP9.92□□□□□ -0.82
CD47-204ENST00000471694 RIMS2Q9UQ26 1411 aa9.92□□□□□ -0.82
CD47-204ENST00000471694 CASTP20810 708 aaKnown RBP9.92□□□□□ -0.82
CD47-204ENST00000471694 PDE4AP27815 886 aa9.92□□□□□ -0.82
CD47-204ENST00000471694 ARGLU1Q9NWB6 273 aaPredicted RBP9.92□□□□□ -0.82
CD47-204ENST00000471694 ALDH1B1P30837 517 aa9.92□□□□□ -0.82
CD47-204ENST00000471694 TMPOP42166 694 aaKnown RBP9.92□□□□□ -0.82
CD47-204ENST00000471694 WDR63Q8IWG1 891 aa9.92□□□□□ -0.82
CD47-204ENST00000471694 ZBED9Q6R2W3 1325 aa9.92□□□□□ -0.82
CD47-204ENST00000471694 TEX35Q5T0J7 233 aa9.92□□□□□ -0.82
CD47-204ENST00000471694 HMGXB3Q12766 1538 aa9.92□□□□□ -0.82
CD47-204ENST00000471694 NOS1P29475 1434 aa9.92□□□□□ -0.82
CD47-204ENST00000471694 MAGEB6P1A0A0J9YX57 407 aa9.92□□□□□ -0.82
CD47-204ENST00000471694 SPDYE3A6NKU9 549 aa9.92□□□□□ -0.82
CD47-204ENST00000471694 HEATR3Q7Z4Q2 680 aa9.92□□□□□ -0.82
CD47-204ENST00000471694 VPS36Q86VN1 386 aa9.92□□□□□ -0.82
CD47-204ENST00000471694 CSPG5O95196 566 aa9.91□□□□□ -0.82
CD47-204ENST00000471694 ARL1P40616 181 aaPredicted RBP9.91□□□□□ -0.82
CD47-204ENST00000471694 RABEP1Q15276 862 aa9.91□□□□□ -0.82
CD47-204ENST00000471694 TCP11L1Q9NUJ3 509 aa9.91□□□□□ -0.82
CD47-204ENST00000471694 GINS2Q9Y248 185 aa9.91□□□□□ -0.82
CD47-204ENST00000471694 F6X3S4 739 aa9.91□□□□□ -0.82
CD47-204ENST00000471694 SPATA32Q96LK8 384 aa9.91□□□□□ -0.82
CD47-204ENST00000471694 IPO9Q96P70 1041 aaKnown RBP9.91□□□□□ -0.82
CD47-204ENST00000471694 GLRX3O76003 335 aaKnown RBP9.91□□□□□ -0.82
CD47-204ENST00000471694 IFIT1BQ5T764 474 aaKnown RBP9.91□□□□□ -0.82
CD47-204ENST00000471694 GIGYF2Q6Y7W6 1299 aaKnown RBP9.91□□□□□ -0.82
CD47-204ENST00000471694 PROCA1Q8NCQ7 364 aaPredicted RBP9.91□□□□□ -0.82
CD47-204ENST00000471694 NACA2Q9H009 215 aa9.91□□□□□ -0.82
CD47-204ENST00000471694 ARHGEF10LQ9HCE6 1279 aa9.91□□□□□ -0.82
CD47-204ENST00000471694 TRIM37O94972 964 aa9.91□□□□□ -0.82
CD47-204ENST00000471694 TRIM6Q9C030 488 aaPredicted RBP9.91□□□□□ -0.82
CD47-204ENST00000471694 SAP30BPQ9UHR5 308 aaKnown RBP9.91□□□□□ -0.82
CD47-204ENST00000471694 CCP110O43303 1012 aa9.9□□□□□ -0.82
CD47-204ENST00000471694 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.9□□□□□ -0.82
CD47-204ENST00000471694 TNMDQ9H2S6 317 aa9.9□□□□□ -0.82
CD47-204ENST00000471694 IRS4O14654 1257 aaPredicted RBP9.9□□□□□ -0.82
CD47-204ENST00000471694 C2CD5Q86YS7 1000 aa9.9□□□□□ -0.82
CD47-204ENST00000471694 MAP7D2Q96T17 732 aa9.9□□□□□ -0.82
CD47-204ENST00000471694 CENPHQ9H3R5 247 aa9.9□□□□□ -0.82
CD47-204ENST00000471694 C6orf50Q9HD87 102 aa9.9□□□□□ -0.82
CD47-204ENST00000471694 CAMSAP2Q08AD1 1489 aa9.9□□□□□ -0.82
CD47-204ENST00000471694 CBFA2T2O43439 604 aa9.9□□□□□ -0.82
CD47-204ENST00000471694 AMPD3Q01432 767 aa9.9□□□□□ -0.82
CD47-204ENST00000471694 HOOK3Q86VS8 718 aa9.9□□□□□ -0.82
CD47-204ENST00000471694 DHX37Q8IY37 1157 aaKnown RBP9.9□□□□□ -0.82
CD47-204ENST00000471694 XAGE3Q8WTP9 111 aa9.9□□□□□ -0.82
CD47-204ENST00000471694 PAGR1Q9BTK6 254 aa9.9□□□□□ -0.82
CD47-204ENST00000471694 SLAIN2Q9P270 581 aa9.9□□□□□ -0.82
CD47-204ENST00000471694 BRD4O60885 1362 aaPredicted RBP9.9□□□□□ -0.82
CD47-204ENST00000471694 SKIV2LQ15477 1246 aaKnown RBP9.9□□□□□ -0.83
CD47-204ENST00000471694 TNPO1Q92973 898 aaKnown RBP9.9□□□□□ -0.83
CD47-204ENST00000471694 PKD2L1Q9P0L9 805 aa9.9□□□□□ -0.83
CD47-204ENST00000471694 IDEP14735 1019 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms