RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 TEX13AQ9BXU3 409 aaPredicted RBP12□□□□□ -0.49
XRN1-208ENST00000470537 PANK3Q9H999 370 aa12□□□□□ -0.49
XRN1-208ENST00000470537 HCSTQ9UBK5 93 aa12□□□□□ -0.49
XRN1-208ENST00000470537 TBC1D12O60347 775 aa11.99□□□□□ -0.49
XRN1-208ENST00000470537 RASSF7Q02833 373 aa11.99□□□□□ -0.49
XRN1-208ENST00000470537 ERFEQ4G0M1 354 aa11.99□□□□□ -0.49
XRN1-208ENST00000470537 PPP4R3BQ5MIZ7 849 aa11.99□□□□□ -0.49
XRN1-208ENST00000470537 SOGA3Q5TF21 947 aa11.99□□□□□ -0.49
XRN1-208ENST00000470537 BRIP1Q9BX63 1249 aa11.99□□□□□ -0.49
XRN1-208ENST00000470537 KNSTRNQ9Y448 316 aa11.99□□□□□ -0.49
XRN1-208ENST00000470537 COL15A1P39059 1388 aa11.98□□□□□ -0.49
XRN1-208ENST00000470537 IQCA1LA6NCM1 817 aa11.98□□□□□ -0.49
XRN1-208ENST00000470537 NPHP1O15259 732 aa11.98□□□□□ -0.49
XRN1-208ENST00000470537 PSEN2P49810 448 aa11.98□□□□□ -0.49
XRN1-208ENST00000470537 EIF4G2P78344 907 aaKnown RBP eCLIP11.98□□□□□ -0.49
XRN1-208ENST00000470537 AEBP1Q8IUX7 1158 aa11.98□□□□□ -0.49
XRN1-208ENST00000470537 TTC5Q8N0Z6 440 aa11.98□□□□□ -0.49
XRN1-208ENST00000470537 ZNF622Q969S3 477 aaKnown RBP eCLIP11.98□□□□□ -0.49
XRN1-208ENST00000470537 TK2O00142 265 aa11.97□□□□□ -0.49
XRN1-208ENST00000470537 CNKSR1Q969H4 720 aa11.97□□□□□ -0.49
XRN1-208ENST00000470537 RNMTO43148 476 aaKnown RBP11.96□□□□□ -0.49
XRN1-208ENST00000470537 CANXP27824 592 aaKnown RBP11.96□□□□□ -0.49
XRN1-208ENST00000470537 IL13P35225 146 aa11.96□□□□□ -0.49
XRN1-208ENST00000470537 DMRTA1Q5VZB9 504 aa11.96□□□□□ -0.49
XRN1-208ENST00000470537 AIDAQ96BJ3 306 aa11.96□□□□□ -0.49
XRN1-208ENST00000470537 PLA2G2EQ9NZK7 142 aa11.96□□□□□ -0.49
XRN1-208ENST00000470537 CLSPNQ9HAW4 1339 aa11.95□□□□□ -0.5
XRN1-208ENST00000470537 LTBP3Q9NS15 1303 aa11.95□□□□□ -0.5
XRN1-208ENST00000470537 SLC39A6Q13433 755 aa11.95□□□□□ -0.5
XRN1-208ENST00000470537 BICDL1Q6ZP65 573 aa11.95□□□□□ -0.5
XRN1-208ENST00000470537 SETDB2Q96T68 719 aa11.95□□□□□ -0.5
XRN1-208ENST00000470537 TAOK3Q9H2K8 898 aa11.95□□□□□ -0.5
XRN1-208ENST00000470537 LGR6Q9HBX8 967 aa11.95□□□□□ -0.5
XRN1-208ENST00000470537 ZBTB1Q9Y2K1 713 aa11.95□□□□□ -0.5
XRN1-208ENST00000470537 NFKBIEO00221 500 aa11.94□□□□□ -0.5
XRN1-208ENST00000470537 C21orf2O43822 256 aa11.94□□□□□ -0.5
XRN1-208ENST00000470537 EIF5P55010 431 aaKnown RBP11.94□□□□□ -0.5
XRN1-208ENST00000470537 PRDM10Q9NQV6 1147 aa11.94□□□□□ -0.5
XRN1-208ENST00000470537 SCN11AQ9UI33 1791 aa11.94□□□□□ -0.5
XRN1-208ENST00000470537 POTECB2RU33 542 aa11.93□□□□□ -0.5
XRN1-208ENST00000470537 ST5P78524 1137 aa11.93□□□□□ -0.5
XRN1-208ENST00000470537 TEFQ10587 303 aa11.93□□□□□ -0.5
XRN1-208ENST00000470537 BCL2L12Q9HB09 334 aa11.93□□□□□ -0.5
XRN1-208ENST00000470537 TJP1Q07157 1748 aa11.93□□□□□ -0.5
XRN1-208ENST00000470537 CARMIL3Q8ND23 1372 aa11.92□□□□□ -0.5
XRN1-208ENST00000470537 IL6STP40189 918 aaPredicted RBP11.92□□□□□ -0.5
XRN1-208ENST00000470537 CTCFP49711 727 aaPredicted RBP11.92□□□□□ -0.5
XRN1-208ENST00000470537 TRIM26Q12899 539 aaPredicted RBP11.92□□□□□ -0.5
XRN1-208ENST00000470537 STYK1Q6J9G0 422 aa11.92□□□□□ -0.5
XRN1-208ENST00000470537 LDHDQ86WU2 507 aa11.92□□□□□ -0.5
XRN1-208ENST00000470537 CNBD1Q8NA66 436 aa11.92□□□□□ -0.5
XRN1-208ENST00000470537 MKRN1Q9UHC7 482 aaKnown RBP11.92□□□□□ -0.5
XRN1-208ENST00000470537 AFDNP55196 1824 aaKnown RBP11.92□□□□□ -0.5
XRN1-208ENST00000470537 NRXN2Q9P2S2 1712 aa11.91□□□□□ -0.5
XRN1-208ENST00000470537 CCDC88AQ3V6T2 1871 aa11.91□□□□□ -0.5
XRN1-208ENST00000470537 HRO43593 1189 aa11.91□□□□□ -0.5
XRN1-208ENST00000470537 DIAPH1O60610 1272 aaKnown RBP11.91□□□□□ -0.5
XRN1-208ENST00000470537 TBC1D9BQ66K14 1250 aa11.91□□□□□ -0.5
XRN1-208ENST00000470537 MASTLQ96GX5 879 aa11.91□□□□□ -0.5
XRN1-208ENST00000470537 KCNK17Q96T54 332 aa11.91□□□□□ -0.5
XRN1-208ENST00000470537 RYDENQ9NUL5 291 aaKnown RBP11.91□□□□□ -0.5
XRN1-208ENST00000470537 ZNF330Q9Y3S2 320 aaPredicted RBP11.91□□□□□ -0.5
XRN1-208ENST00000470537 ADAMTS7Q9UKP4 1686 aa11.91□□□□□ -0.5
XRN1-208ENST00000470537 DLEC1Q9Y238 1755 aa11.9□□□□□ -0.5
XRN1-208ENST00000470537 TMEM88BA6NKF7 163 aa11.9□□□□□ -0.5
XRN1-208ENST00000470537 DDNO94850 711 aaPredicted RBP11.9□□□□□ -0.5
XRN1-208ENST00000470537 HMOX1P09601 288 aa11.9□□□□□ -0.5
XRN1-208ENST00000470537 MTHFSDQ2M296 383 aaKnown RBP11.9□□□□□ -0.5
XRN1-208ENST00000470537 PRR5LQ6MZQ0 368 aa11.9□□□□□ -0.5
XRN1-208ENST00000470537 ZNF790Q6PG37 636 aa11.9□□□□□ -0.5
XRN1-208ENST00000470537 PNMA8AQ86V59 439 aaPredicted RBP11.9□□□□□ -0.5
XRN1-208ENST00000470537 FMNL2Q96PY5 1086 aa11.9□□□□□ -0.5
XRN1-208ENST00000470537 ZNF652Q9Y2D9 606 aa11.9□□□□□ -0.5
XRN1-208ENST00000470537 MRC1P22897 1456 aa11.89□□□□□ -0.51
XRN1-208ENST00000470537 SRGNP10124 158 aa11.89□□□□□ -0.51
XRN1-208ENST00000470537 CLEC4GQ6UXB4 293 aa11.89□□□□□ -0.51
XRN1-208ENST00000470537 GAS2L2Q8NHY3 880 aa11.89□□□□□ -0.51
XRN1-208ENST00000470537 TBC1D2BQ9UPU7 963 aa11.89□□□□□ -0.51
XRN1-208ENST00000470537 CNTNAP1P78357 1384 aa11.89□□□□□ -0.51
XRN1-208ENST00000470537 TIAM2Q8IVF5 1701 aa11.89□□□□□ -0.51
XRN1-208ENST00000470537 DICER1Q9UPY3 1922 aaKnown RBP11.88□□□□□ -0.51
XRN1-208ENST00000470537 GNAT3A8MTJ3 354 aa11.88□□□□□ -0.51
XRN1-208ENST00000470537 HSPA5P11021 654 aaKnown RBP11.88□□□□□ -0.51
XRN1-208ENST00000470537 MAP2K1Q02750 393 aaPredicted RBP11.88□□□□□ -0.51
XRN1-208ENST00000470537 CCDC93Q567U6 631 aa11.88□□□□□ -0.51
XRN1-208ENST00000470537 PRPF40BQ6NWY9 871 aaKnown RBP11.88□□□□□ -0.51
XRN1-208ENST00000470537 TPTE2Q6XPS3 522 aa11.88□□□□□ -0.51
XRN1-208ENST00000470537 RTKN2Q8IZC4 609 aa11.88□□□□□ -0.51
XRN1-208ENST00000470537 OXER1Q8TDS5 423 aa11.88□□□□□ -0.51
XRN1-208ENST00000470537 KCTD12Q96CX2 325 aaKnown RBP11.88□□□□□ -0.51
XRN1-208ENST00000470537 ZNF496Q96IT1 587 aaPredicted RBP11.88□□□□□ -0.51
XRN1-208ENST00000470537 TAF1DQ9H5J8 278 aaPredicted RBP11.88□□□□□ -0.51
XRN1-208ENST00000470537 HEG1Q9ULI3 1381 aa11.88□□□□□ -0.51
XRN1-208ENST00000470537 FOXN1O15353 648 aa11.87□□□□□ -0.51
XRN1-208ENST00000470537 NPR1P16066 1061 aa11.87□□□□□ -0.51
XRN1-208ENST00000470537 ALDH1B1P30837 517 aa11.87□□□□□ -0.51
XRN1-208ENST00000470537 NBPF5PQ86XG9 351 aaPredicted RBP11.87□□□□□ -0.51
XRN1-208ENST00000470537 HACL1Q9UJ83 578 aa11.87□□□□□ -0.51
XRN1-208ENST00000470537 DEFB115Q30KQ5 88 aa11.86□□□□□ -0.51
XRN1-208ENST00000470537 EAPPQ56P03 285 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms