RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 SMARCE1Q969G3 411 aa11.2□□□□□ -0.62
NHLRC3-203ENST00000470258 SCAND2PQ9GZW5 306 aaPredicted RBP11.2□□□□□ -0.62
NHLRC3-203ENST00000470258 LSG1Q9H089 658 aaKnown RBP11.2□□□□□ -0.62
NHLRC3-203ENST00000470258 ZNF142P52746 1687 aaPredicted RBP11.2□□□□□ -0.62
NHLRC3-203ENST00000470258 NPHP3Q7Z494 1330 aa11.2□□□□□ -0.62
NHLRC3-203ENST00000470258 SETBP1Q9Y6X0 1596 aa11.2□□□□□ -0.62
NHLRC3-203ENST00000470258 NEMFO60524 1076 aa11.2□□□□□ -0.62
NHLRC3-203ENST00000470258 GPS2Q13227 327 aa11.2□□□□□ -0.62
NHLRC3-203ENST00000470258 NME9Q86XW9 330 aa11.2□□□□□ -0.62
NHLRC3-203ENST00000470258 CREBRFQ8IUR6 639 aa11.2□□□□□ -0.62
NHLRC3-203ENST00000470258 TXLNBQ8N3L3 684 aa11.2□□□□□ -0.62
NHLRC3-203ENST00000470258 LEO1Q8WVC0 666 aaPredicted RBP11.2□□□□□ -0.62
NHLRC3-203ENST00000470258 SOX12O15370 315 aa11.2□□□□□ -0.62
NHLRC3-203ENST00000470258 H2AFXP16104 143 aaPredicted RBP11.2□□□□□ -0.62
NHLRC3-203ENST00000470258 CCZ1BP86790 482 aa11.2□□□□□ -0.62
NHLRC3-203ENST00000470258 CCZ1P86791 482 aaPredicted RBP11.2□□□□□ -0.62
NHLRC3-203ENST00000470258 FAM177A1Q8N128 213 aaPredicted RBP11.2□□□□□ -0.62
NHLRC3-203ENST00000470258 CNTROBQ8N137 903 aa11.2□□□□□ -0.62
NHLRC3-203ENST00000470258 DDX11Q96FC9 970 aa11.2□□□□□ -0.62
NHLRC3-203ENST00000470258 EPC1Q9H2F5 836 aa11.2□□□□□ -0.62
NHLRC3-203ENST00000470258 RAB11FIP3O75154 756 aa11.19□□□□□ -0.62
NHLRC3-203ENST00000470258 ZSCAN26Q16670 478 aa11.19□□□□□ -0.62
NHLRC3-203ENST00000470258 FMNL2Q96PY5 1086 aa11.19□□□□□ -0.62
NHLRC3-203ENST00000470258 STK31Q9BXU1 1019 aa11.19□□□□□ -0.62
NHLRC3-203ENST00000470258 SH2B1Q9NRF2 756 aaPredicted RBP11.19□□□□□ -0.62
NHLRC3-203ENST00000470258 LCMT1Q9UIC8 334 aa11.19□□□□□ -0.62
NHLRC3-203ENST00000470258 SMC2O95347 1197 aa11.19□□□□□ -0.62
NHLRC3-203ENST00000470258 PTH1RQ03431 593 aa11.19□□□□□ -0.62
NHLRC3-203ENST00000470258 OS9Q13438 667 aaPredicted RBP11.19□□□□□ -0.62
NHLRC3-203ENST00000470258 LARP1Q6PKG0 1096 aaKnown RBP11.19□□□□□ -0.62
NHLRC3-203ENST00000470258 ZSCAN31Q96LW9 406 aaPredicted RBP11.19□□□□□ -0.62
NHLRC3-203ENST00000470258 TOMM22Q9NS69 142 aa11.19□□□□□ -0.62
NHLRC3-203ENST00000470258 DNAI1Q9UI46 699 aa11.19□□□□□ -0.62
NHLRC3-203ENST00000470258 PPP6R1Q9UPN7 881 aa11.19□□□□□ -0.62
NHLRC3-203ENST00000470258 ZFYVE9O95405 1425 aa11.19□□□□□ -0.62
NHLRC3-203ENST00000470258 MYO1CO00159 1063 aa11.19□□□□□ -0.62
NHLRC3-203ENST00000470258 GNAI3P08754 354 aa11.19□□□□□ -0.62
NHLRC3-203ENST00000470258 OAS2P29728 719 aaKnown RBP11.19□□□□□ -0.62
NHLRC3-203ENST00000470258 LMAN1P49257 510 aa11.19□□□□□ -0.62
NHLRC3-203ENST00000470258 ST3GAL1Q11201 340 aa11.19□□□□□ -0.62
NHLRC3-203ENST00000470258 TSPYL4Q9UJ04 414 aa11.19□□□□□ -0.62
NHLRC3-203ENST00000470258 TPCN1Q9ULQ1 816 aa11.19□□□□□ -0.62
NHLRC3-203ENST00000470258 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.19□□□□□ -0.62
NHLRC3-203ENST00000470258 EFCAB6Q5THR3 1501 aa11.18□□□□□ -0.62
NHLRC3-203ENST00000470258 KIAA0232Q92628 1395 aa11.18□□□□□ -0.62
NHLRC3-203ENST00000470258 URI1O94763 535 aaPredicted RBP11.18□□□□□ -0.62
NHLRC3-203ENST00000470258 ATP8B2P98198 1209 aa11.18□□□□□ -0.62
NHLRC3-203ENST00000470258 AOPEPQ8N6M6 819 aa11.18□□□□□ -0.62
NHLRC3-203ENST00000470258 STAP2Q9UGK3 403 aa11.18□□□□□ -0.62
NHLRC3-203ENST00000470258 KIF2AO00139 706 aaPredicted RBP11.18□□□□□ -0.62
NHLRC3-203ENST00000470258 ZKSCAN1P17029 563 aaPredicted RBP11.18□□□□□ -0.62
NHLRC3-203ENST00000470258 PDCP20941 246 aa11.18□□□□□ -0.62
NHLRC3-203ENST00000470258 GTF2A1P52655 376 aaPredicted RBP11.18□□□□□ -0.62
NHLRC3-203ENST00000470258 FAM193AP78312 1265 aa11.18□□□□□ -0.62
NHLRC3-203ENST00000470258 MRFAP1L1Q96HT8 127 aa11.18□□□□□ -0.62
NHLRC3-203ENST00000470258 PGBD1Q96JS3 809 aa11.18□□□□□ -0.62
NHLRC3-203ENST00000470258 CDC25BP30305 580 aa11.17□□□□□ -0.62
NHLRC3-203ENST00000470258 MLECQ14165 292 aa11.17□□□□□ -0.62
NHLRC3-203ENST00000470258 VPS53Q5VIR6 699 aa11.17□□□□□ -0.62
NHLRC3-203ENST00000470258 TMC6Q7Z403 805 aa11.17□□□□□ -0.62
NHLRC3-203ENST00000470258 PPP1R13BQ96KQ4 1090 aa11.17□□□□□ -0.62
NHLRC3-203ENST00000470258 H3BQV1 296 aa11.17□□□□□ -0.62
NHLRC3-203ENST00000470258 CHL1O00533 1208 aa11.17□□□□□ -0.62
NHLRC3-203ENST00000470258 IFFO2Q5TF58 517 aa11.17□□□□□ -0.62
NHLRC3-203ENST00000470258 ELP1O95163 1332 aa11.17□□□□□ -0.62
NHLRC3-203ENST00000470258 SPATA31D1Q6ZQQ2 1576 aa11.17□□□□□ -0.62
NHLRC3-203ENST00000470258 UBTFL1P0CB47 393 aaPredicted RBP11.17□□□□□ -0.62
NHLRC3-203ENST00000470258 IQCB1Q15051 598 aa11.17□□□□□ -0.62
NHLRC3-203ENST00000470258 STX1AQ16623 288 aa11.17□□□□□ -0.62
NHLRC3-203ENST00000470258 COL9A3Q14050 684 aaPredicted RBP11.16□□□□□ -0.62
NHLRC3-203ENST00000470258 ZRSR1Q15695 479 aaKnown RBP11.16□□□□□ -0.62
NHLRC3-203ENST00000470258 RGS22Q8NE09 1264 aa11.16□□□□□ -0.62
NHLRC3-203ENST00000470258 CWC15Q9P013 229 aaKnown RBP11.16□□□□□ -0.62
NHLRC3-203ENST00000470258 NRDCO43847 1150 aa11.16□□□□□ -0.62
NHLRC3-203ENST00000470258 SFPQP23246 707 aaKnown RBP eCLIP11.16□□□□□ -0.62
NHLRC3-203ENST00000470258 E4F1Q66K89 784 aaPredicted RBP11.16□□□□□ -0.62
NHLRC3-203ENST00000470258 CARD6Q9BX69 1037 aa11.16□□□□□ -0.62
NHLRC3-203ENST00000470258 NPATQ14207 1427 aa11.16□□□□□ -0.62
NHLRC3-203ENST00000470258 DHX16O60231 1041 aaKnown RBP11.15□□□□□ -0.62
NHLRC3-203ENST00000470258 NFATC2IPQ8NCF5 419 aa11.15□□□□□ -0.62
NHLRC3-203ENST00000470258 TTC21AQ8NDW8 1320 aa11.15□□□□□ -0.62
NHLRC3-203ENST00000470258 IFT172Q9UG01 1749 aa11.15□□□□□ -0.62
NHLRC3-203ENST00000470258 PPFIA3O75145 1194 aa11.15□□□□□ -0.62
NHLRC3-203ENST00000470258 SMC1AQ14683 1233 aaKnown RBP11.15□□□□□ -0.62
NHLRC3-203ENST00000470258 RHPN1Q8TCX5 695 aa11.15□□□□□ -0.62
NHLRC3-203ENST00000470258 ORC3Q9UBD5 711 aaPredicted RBP11.15□□□□□ -0.62
NHLRC3-203ENST00000470258 SETD1BQ9UPS6 1966 aaKnown RBP11.15□□□□□ -0.62
NHLRC3-203ENST00000470258 RPGRIP1LQ68CZ1 1315 aa11.15□□□□□ -0.62
NHLRC3-203ENST00000470258 ADGRB3O60242 1522 aa11.15□□□□□ -0.62
NHLRC3-203ENST00000470258 YTHDC2Q9H6S0 1430 aaKnown RBP11.15□□□□□ -0.63
NHLRC3-203ENST00000470258 KINO60870 393 aaKnown RBP11.15□□□□□ -0.63
NHLRC3-203ENST00000470258 CASQ1P31415 396 aa11.15□□□□□ -0.63
NHLRC3-203ENST00000470258 FLIIQ13045 1269 aa11.15□□□□□ -0.63
NHLRC3-203ENST00000470258 CCDC73Q6ZRK6 1079 aa11.15□□□□□ -0.63
NHLRC3-203ENST00000470258 PPP1R42Q7Z4L9 355 aa11.15□□□□□ -0.63
NHLRC3-203ENST00000470258 PI4K2BQ8TCG2 481 aa11.15□□□□□ -0.63
NHLRC3-203ENST00000470258 RUFY2Q8WXA3 655 aa11.15□□□□□ -0.63
NHLRC3-203ENST00000470258 IL17RAQ96F46 866 aa11.15□□□□□ -0.63
NHLRC3-203ENST00000470258 COG3Q96JB2 828 aa11.15□□□□□ -0.63
NHLRC3-203ENST00000470258 AK7Q96M32 723 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms