RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 NIP7Q9Y221 180 aaKnown RBP eCLIP14.21□□□□□ -0.13
SREBF1-209ENST00000470247 N4BP2Q86UW6 1770 aaPredicted RBP14.21□□□□□ -0.13
SREBF1-209ENST00000470247 QSER1Q2KHR3 1735 aa14.21□□□□□ -0.14
SREBF1-209ENST00000470247 GRM8O00222 908 aa14.2□□□□□ -0.14
SREBF1-209ENST00000470247 SYNE4Q8N205 404 aa14.2□□□□□ -0.14
SREBF1-209ENST00000470247 MSH5O43196 834 aa14.19□□□□□ -0.14
SREBF1-209ENST00000470247 NTSR2O95665 410 aa14.19□□□□□ -0.14
SREBF1-209ENST00000470247 PARP10Q53GL7 1025 aa14.19□□□□□ -0.14
SREBF1-209ENST00000470247 BICDL1Q6ZP65 573 aa14.19□□□□□ -0.14
SREBF1-209ENST00000470247 KAZALD1Q96I82 304 aa14.19□□□□□ -0.14
SREBF1-209ENST00000470247 PCCAP05165 728 aaPredicted RBP14.18□□□□□ -0.14
SREBF1-209ENST00000470247 NEFLP07196 543 aa14.18□□□□□ -0.14
SREBF1-209ENST00000470247 DDR1Q08345 913 aa14.18□□□□□ -0.14
SREBF1-209ENST00000470247 R3HDM1Q15032 1099 aaKnown RBP14.18□□□□□ -0.14
SREBF1-209ENST00000470247 NLGN1Q8N2Q7 840 aa14.18□□□□□ -0.14
SREBF1-209ENST00000470247 ZBTB38Q8NAP3 1195 aaPredicted RBP14.18□□□□□ -0.14
SREBF1-209ENST00000470247 SETDB2Q96T68 719 aa14.18□□□□□ -0.14
SREBF1-209ENST00000470247 C9orf78Q9NZ63 289 aaPredicted RBP14.18□□□□□ -0.14
SREBF1-209ENST00000470247 ANKRD36CQ5JPF3 1778 aa14.18□□□□□ -0.14
SREBF1-209ENST00000470247 GNAI3P08754 354 aa14.17□□□□□ -0.14
SREBF1-209ENST00000470247 UBE3BQ7Z3V4 1068 aa14.17□□□□□ -0.14
SREBF1-209ENST00000470247 SLC16A10Q8TF71 515 aa14.17□□□□□ -0.14
SREBF1-209ENST00000470247 FAM89AQ96GI7 184 aa14.17□□□□□ -0.14
SREBF1-209ENST00000470247 SUCLG2Q96I99 432 aa14.17□□□□□ -0.14
SREBF1-209ENST00000470247 UTP14AQ9BVJ6 771 aaKnown RBP14.17□□□□□ -0.14
SREBF1-209ENST00000470247 PCDHB15Q9Y5E8 787 aa14.17□□□□□ -0.14
SREBF1-209ENST00000470247 FAM177BA6PVY3 158 aa14.16□□□□□ -0.14
SREBF1-209ENST00000470247 POLRMTO00411 1230 aaKnown RBP14.16□□□□□ -0.14
SREBF1-209ENST00000470247 EPHA10Q5JZY3 1008 aa14.16□□□□□ -0.14
SREBF1-209ENST00000470247 ERICH6BQ5W0A0 696 aa14.16□□□□□ -0.14
SREBF1-209ENST00000470247 MSL1Q68DK7 614 aa14.16□□□□□ -0.14
SREBF1-209ENST00000470247 C1orf115Q9H7X2 142 aa14.16□□□□□ -0.14
SREBF1-209ENST00000470247 TRMT112Q9UI30 125 aaKnown RBP14.16□□□□□ -0.14
SREBF1-209ENST00000470247 LRRFIP2Q9Y608 721 aaKnown RBP14.16□□□□□ -0.14
SREBF1-209ENST00000470247 SERPINB2P05120 415 aa14.15□□□□□ -0.14
SREBF1-209ENST00000470247 UBTFL1P0CB47 393 aaPredicted RBP14.15□□□□□ -0.14
SREBF1-209ENST00000470247 FOXO4P98177 505 aa14.15□□□□□ -0.14
SREBF1-209ENST00000470247 AAMPQ13685 434 aa14.15□□□□□ -0.14
SREBF1-209ENST00000470247 RTL5Q5HYW3 569 aaPredicted RBP14.15□□□□□ -0.14
SREBF1-209ENST00000470247 SLC10A5Q5PT55 438 aa14.15□□□□□ -0.14
SREBF1-209ENST00000470247 PPP1R42Q7Z4L9 355 aa14.15□□□□□ -0.14
SREBF1-209ENST00000470247 NUTM1Q86Y26 1132 aa14.15□□□□□ -0.14
SREBF1-209ENST00000470247 SIRT2Q8IXJ6 389 aa14.15□□□□□ -0.14
SREBF1-209ENST00000470247 PLA2G12BQ9BX93 195 aa14.15□□□□□ -0.14
SREBF1-209ENST00000470247 CHMP4BQ9H444 224 aaKnown RBP14.15□□□□□ -0.14
SREBF1-209ENST00000470247 AFDNP55196 1824 aaKnown RBP14.15□□□□□ -0.14
SREBF1-209ENST00000470247 CDHR2Q9BYE9 1310 aa14.15□□□□□ -0.15
SREBF1-209ENST00000470247 CARMIL3Q8ND23 1372 aa14.14□□□□□ -0.15
SREBF1-209ENST00000470247 PSDA5PKW4 1024 aaPredicted RBP14.14□□□□□ -0.15
SREBF1-209ENST00000470247 SOCS7O14512 581 aa14.14□□□□□ -0.15
SREBF1-209ENST00000470247 GNAI2P04899 355 aa14.14□□□□□ -0.15
SREBF1-209ENST00000470247 MMP10P09238 476 aa14.14□□□□□ -0.15
SREBF1-209ENST00000470247 ERFEQ4G0M1 354 aa14.14□□□□□ -0.15
SREBF1-209ENST00000470247 ANKRD44Q8N8A2 993 aa14.14□□□□□ -0.15
SREBF1-209ENST00000470247 COL24A1Q17RW2 1714 aa14.14□□□□□ -0.15
SREBF1-209ENST00000470247 CASZ1Q86V15 1759 aa14.14□□□□□ -0.15
SREBF1-209ENST00000470247 SH3TC1Q8TE82 1336 aa14.14□□□□□ -0.15
SREBF1-209ENST00000470247 IRS4O14654 1257 aaPredicted RBP14.13□□□□□ -0.15
SREBF1-209ENST00000470247 RABL6Q3YEC7 729 aaPredicted RBP14.13□□□□□ -0.15
SREBF1-209ENST00000470247 PRR5LQ6MZQ0 368 aa14.13□□□□□ -0.15
SREBF1-209ENST00000470247 TPTE2Q6XPS3 522 aa14.13□□□□□ -0.15
SREBF1-209ENST00000470247 NBPF5PQ86XG9 351 aaPredicted RBP14.13□□□□□ -0.15
SREBF1-209ENST00000470247 BICC1Q9H694 974 aaKnown RBP14.13□□□□□ -0.15
SREBF1-209ENST00000470247 ABCC12Q96J65 1359 aa14.12□□□□□ -0.15
SREBF1-209ENST00000470247 HCLS1P14317 486 aaPredicted RBP14.12□□□□□ -0.15
SREBF1-209ENST00000470247 CEP85Q6P2H3 762 aa14.12□□□□□ -0.15
SREBF1-209ENST00000470247 CCDC24Q8N4L8 307 aa14.12□□□□□ -0.15
SREBF1-209ENST00000470247 NYXQ9GZU5 481 aa14.12□□□□□ -0.15
SREBF1-209ENST00000470247 GTF3C3Q9Y5Q9 886 aa14.12□□□□□ -0.15
SREBF1-209ENST00000470247 ZBTB7AO95365 584 aa14.11□□□□□ -0.15
SREBF1-209ENST00000470247 CSF1RP07333 972 aa14.11□□□□□ -0.15
SREBF1-209ENST00000470247 ATP8B2P98198 1209 aa14.11□□□□□ -0.15
SREBF1-209ENST00000470247 MTX1Q13505 466 aa14.11□□□□□ -0.15
SREBF1-209ENST00000470247 C3orf67Q6ZVT6 689 aa14.11□□□□□ -0.15
SREBF1-209ENST00000470247 RPAP2Q8IXW5 612 aaPredicted RBP14.11□□□□□ -0.15
SREBF1-209ENST00000470247 SGIP1Q9BQI5 828 aa14.11□□□□□ -0.15
SREBF1-209ENST00000470247 MTFR1LQ9H019 292 aa14.11□□□□□ -0.15
SREBF1-209ENST00000470247 PNMA6EA0A0J9YXQ4 647 aa14.1□□□□□ -0.15
SREBF1-209ENST00000470247 PDE8AO60658 829 aa14.1□□□□□ -0.15
SREBF1-209ENST00000470247 TTLL11Q8NHH1 800 aa14.1□□□□□ -0.15
SREBF1-209ENST00000470247 HDAC5Q9UQL6 1122 aa14.1□□□□□ -0.15
SREBF1-209ENST00000470247 ATF5Q9Y2D1 282 aaPredicted RBP14.1□□□□□ -0.15
SREBF1-209ENST00000470247 PARP3Q9Y6F1 533 aa14.1□□□□□ -0.15
SREBF1-209ENST00000470247 NRXN2Q9P2S2 1712 aa14.1□□□□□ -0.15
SREBF1-209ENST00000470247 IGHDP01880 384 aa14.09□□□□□ -0.15
SREBF1-209ENST00000470247 RFX5P48382 616 aaPredicted RBP14.09□□□□□ -0.15
SREBF1-209ENST00000470247 POLA2Q14181 598 aa14.09□□□□□ -0.15
SREBF1-209ENST00000470247 SF3B3Q15393 1217 aaKnown RBP14.09□□□□□ -0.15
SREBF1-209ENST00000470247 LMBR1LQ6UX01 489 aa14.09□□□□□ -0.15
SREBF1-209ENST00000470247 CNBD1Q8NA66 436 aa14.09□□□□□ -0.15
SREBF1-209ENST00000470247 SSH3Q8TE77 659 aa14.09□□□□□ -0.15
SREBF1-209ENST00000470247 KLRG2A4D1S0 409 aaPredicted RBP14.08□□□□□ -0.16
SREBF1-209ENST00000470247 PTGER2P43116 358 aa14.08□□□□□ -0.16
SREBF1-209ENST00000470247 CTSWP56202 376 aa14.08□□□□□ -0.16
SREBF1-209ENST00000470247 PPP4R2Q9NY27 417 aa14.08□□□□□ -0.16
SREBF1-209ENST00000470247 RIC1Q4ADV7 1423 aa14.07□□□□□ -0.16
SREBF1-209ENST00000470247 GTF2E1P29083 439 aaPredicted RBP14.07□□□□□ -0.16
SREBF1-209ENST00000470247 HDAC1Q13547 482 aaPredicted RBP14.07□□□□□ -0.16
SREBF1-209ENST00000470247 DDX60Q8IY21 1712 aaKnown RBP14.07□□□□□ -0.16
SREBF1-209ENST00000470247 BRIP1Q9BX63 1249 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms