RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 SMC5Q8IY18 1101 aa16.04■□□□□ 0.16
RUNX1-213ENST00000469087 ANKRD36CQ5JPF3 1778 aa16.04■□□□□ 0.16
RUNX1-213ENST00000469087 UBR3Q6ZT12 1888 aa16.04■□□□□ 0.16
RUNX1-213ENST00000469087 ZPR1O75312 459 aa16.03■□□□□ 0.16
RUNX1-213ENST00000469087 RFC4P35249 363 aa16.03■□□□□ 0.16
RUNX1-213ENST00000469087 ZNF827Q17R98 1081 aa16.03■□□□□ 0.16
RUNX1-213ENST00000469087 PPP1R42Q7Z4L9 355 aa16.03■□□□□ 0.16
RUNX1-213ENST00000469087 AKT1S1Q96B36 256 aa16.03■□□□□ 0.16
RUNX1-213ENST00000469087 BICC1Q9H694 974 aaKnown RBP16.03■□□□□ 0.16
RUNX1-213ENST00000469087 SKAP1Q86WV1 359 aa16.03■□□□□ 0.16
RUNX1-213ENST00000469087 SYNE4Q8N205 404 aa16.03■□□□□ 0.16
RUNX1-213ENST00000469087 FAM89AQ96GI7 184 aa16.03■□□□□ 0.16
RUNX1-213ENST00000469087 DCTPP1Q9H773 170 aa16.03■□□□□ 0.16
RUNX1-213ENST00000469087 RGPD3A6NKT7 1758 aaPredicted RBP16.02■□□□□ 0.16
RUNX1-213ENST00000469087 BCORQ6W2J9 1755 aa16.02■□□□□ 0.16
RUNX1-213ENST00000469087 RGPD4Q7Z3J3 1758 aa16.02■□□□□ 0.16
RUNX1-213ENST00000469087 RGL2O15211 777 aa16.02■□□□□ 0.15
RUNX1-213ENST00000469087 PCCAP05165 728 aaPredicted RBP16.02■□□□□ 0.15
RUNX1-213ENST00000469087 ADRA2BP18089 450 aa16.02■□□□□ 0.15
RUNX1-213ENST00000469087 SSFA2P28290 1259 aa16.02■□□□□ 0.15
RUNX1-213ENST00000469087 SF3B2Q13435 895 aaKnown RBP16.02■□□□□ 0.15
RUNX1-213ENST00000469087 MTX1Q13505 466 aa16.02■□□□□ 0.15
RUNX1-213ENST00000469087 SUSD4Q5VX71 490 aa16.02■□□□□ 0.15
RUNX1-213ENST00000469087 ZBTB38Q8NAP3 1195 aaPredicted RBP16.02■□□□□ 0.15
RUNX1-213ENST00000469087 SSH3Q8TE77 659 aa16.02■□□□□ 0.15
RUNX1-213ENST00000469087 NIP7Q9Y221 180 aaKnown RBP eCLIP16.02■□□□□ 0.15
RUNX1-213ENST00000469087 ZNF652Q9Y2D9 606 aa16.02■□□□□ 0.15
RUNX1-213ENST00000469087 SRGAP3O43295 1099 aa16.01■□□□□ 0.15
RUNX1-213ENST00000469087 HMMRO75330 724 aa16.01■□□□□ 0.15
RUNX1-213ENST00000469087 DEFB132Q7Z7B7 95 aa16.01■□□□□ 0.15
RUNX1-213ENST00000469087 USP42Q9H9J4 1324 aaKnown RBP16.01■□□□□ 0.15
RUNX1-213ENST00000469087 FOXO4P98177 505 aa16■□□□□ 0.15
RUNX1-213ENST00000469087 POLA2Q14181 598 aa16■□□□□ 0.15
RUNX1-213ENST00000469087 TBC1D9BQ66K14 1250 aa16■□□□□ 0.15
RUNX1-213ENST00000469087 GCC1Q96CN9 775 aa16■□□□□ 0.15
RUNX1-213ENST00000469087 TFCP2L1Q9NZI6 479 aa16■□□□□ 0.15
RUNX1-213ENST00000469087 TRMT112Q9UI30 125 aaKnown RBP16■□□□□ 0.15
RUNX1-213ENST00000469087 C4AP0C0L4 1744 aa16■□□□□ 0.15
RUNX1-213ENST00000469087 PARP10Q53GL7 1025 aa16■□□□□ 0.15
RUNX1-213ENST00000469087 BICDL1Q6ZP65 573 aa16■□□□□ 0.15
RUNX1-213ENST00000469087 PDZRN3Q9UPQ7 1066 aa16■□□□□ 0.15
RUNX1-213ENST00000469087 FAM177BA6PVY3 158 aa15.99■□□□□ 0.15
RUNX1-213ENST00000469087 BAG6P46379 1132 aa15.99■□□□□ 0.15
RUNX1-213ENST00000469087 RABL6Q3YEC7 729 aaPredicted RBP15.99■□□□□ 0.15
RUNX1-213ENST00000469087 UTP14AQ9BVJ6 771 aaKnown RBP15.98■□□□□ 0.15
RUNX1-213ENST00000469087 SCN7AQ01118 1682 aa15.98■□□□□ 0.15
RUNX1-213ENST00000469087 LMBR1LQ6UX01 489 aa15.98■□□□□ 0.15
RUNX1-213ENST00000469087 CCDC125Q86Z20 511 aa15.98■□□□□ 0.15
RUNX1-213ENST00000469087 CDHR2Q9BYE9 1310 aa15.97■□□□□ 0.15
RUNX1-213ENST00000469087 NTSR2O95665 410 aa15.97■□□□□ 0.15
RUNX1-213ENST00000469087 GYS1P13807 737 aa15.97■□□□□ 0.15
RUNX1-213ENST00000469087 NUCB1Q02818 461 aa15.97■□□□□ 0.15
RUNX1-213ENST00000469087 ANKRD45Q5TZF3 282 aa15.97■□□□□ 0.15
RUNX1-213ENST00000469087 COL23A1Q86Y22 540 aaPredicted RBP15.97■□□□□ 0.15
RUNX1-213ENST00000469087 SETDB2Q96T68 719 aa15.97■□□□□ 0.15
RUNX1-213ENST00000469087 PLA2G12BQ9BX93 195 aa15.97■□□□□ 0.15
RUNX1-213ENST00000469087 EXOC6BQ9Y2D4 811 aa15.97■□□□□ 0.15
RUNX1-213ENST00000469087 IRS4O14654 1257 aaPredicted RBP15.96■□□□□ 0.15
RUNX1-213ENST00000469087 ANO8Q9HCE9 1232 aaPredicted RBP15.96■□□□□ 0.15
RUNX1-213ENST00000469087 SURF6O75683 361 aaKnown RBP15.95■□□□□ 0.14
RUNX1-213ENST00000469087 NUTM1Q86Y26 1132 aa15.95■□□□□ 0.14
RUNX1-213ENST00000469087 SH3TC1Q8TE82 1336 aa15.95■□□□□ 0.14
RUNX1-213ENST00000469087 APBB1O00213 710 aa15.95■□□□□ 0.14
RUNX1-213ENST00000469087 CSF1RP07333 972 aa15.95■□□□□ 0.14
RUNX1-213ENST00000469087 RFX5P48382 616 aaPredicted RBP15.95■□□□□ 0.14
RUNX1-213ENST00000469087 NFIXQ14938 502 aa15.95■□□□□ 0.14
RUNX1-213ENST00000469087 SLC15A2Q16348 729 aa15.95■□□□□ 0.14
RUNX1-213ENST00000469087 CHD1LQ86WJ1 897 aa15.95■□□□□ 0.14
RUNX1-213ENST00000469087 PA2G4Q9UQ80 394 aaKnown RBP15.95■□□□□ 0.14
RUNX1-213ENST00000469087 TUBGCP6Q96RT7 1819 aa15.94■□□□□ 0.14
RUNX1-213ENST00000469087 KLHDC4Q8TBB5 520 aa15.94■□□□□ 0.14
RUNX1-213ENST00000469087 NOP58Q9Y2X3 529 aaKnown RBP15.94■□□□□ 0.14
RUNX1-213ENST00000469087 PNPLA7Q6ZV29 1317 aa15.94■□□□□ 0.14
RUNX1-213ENST00000469087 MSH5O43196 834 aa15.93■□□□□ 0.14
RUNX1-213ENST00000469087 PDE8AO60658 829 aa15.93■□□□□ 0.14
RUNX1-213ENST00000469087 HCLS1P14317 486 aaPredicted RBP15.93■□□□□ 0.14
RUNX1-213ENST00000469087 FLAD1Q8NFF5 587 aa15.93■□□□□ 0.14
RUNX1-213ENST00000469087 TTLL11Q8NHH1 800 aa15.93■□□□□ 0.14
RUNX1-213ENST00000469087 LNPKQ9C0E8 428 aa15.93■□□□□ 0.14
RUNX1-213ENST00000469087 SMARCA5O60264 1052 aaPredicted RBP15.92■□□□□ 0.14
RUNX1-213ENST00000469087 PDE4AP27815 886 aa15.92■□□□□ 0.14
RUNX1-213ENST00000469087 TM4SF1P30408 202 aa15.92■□□□□ 0.14
RUNX1-213ENST00000469087 RGS3P49796 1198 aa15.92■□□□□ 0.14
RUNX1-213ENST00000469087 ERFEQ4G0M1 354 aa15.92■□□□□ 0.14
RUNX1-213ENST00000469087 CCDC85AQ96PX6 553 aaPredicted RBP15.92■□□□□ 0.14
RUNX1-213ENST00000469087 CHMP3Q9Y3E7 222 aa15.92■□□□□ 0.14
RUNX1-213ENST00000469087 PTPN12Q05209 780 aaKnown RBP15.92■□□□□ 0.14
RUNX1-213ENST00000469087 NBPF5PQ86XG9 351 aaPredicted RBP15.92■□□□□ 0.14
RUNX1-213ENST00000469087 STK32BQ9NY57 414 aa15.92■□□□□ 0.14
RUNX1-213ENST00000469087 CTSWP56202 376 aa15.91■□□□□ 0.14
RUNX1-213ENST00000469087 TPTE2Q6XPS3 522 aa15.91■□□□□ 0.14
RUNX1-213ENST00000469087 COPRSQ9NQ92 184 aa15.91■□□□□ 0.14
RUNX1-213ENST00000469087 RAB11FIP3O75154 756 aa15.9■□□□□ 0.14
RUNX1-213ENST00000469087 GTF2E1P29083 439 aaPredicted RBP15.9■□□□□ 0.14
RUNX1-213ENST00000469087 SLC10A5Q5PT55 438 aa15.9■□□□□ 0.14
RUNX1-213ENST00000469087 C16orf71Q8IYS4 520 aaPredicted RBP15.9■□□□□ 0.14
RUNX1-213ENST00000469087 NYXQ9GZU5 481 aa15.9■□□□□ 0.14
RUNX1-213ENST00000469087 BCL11AQ9H165 835 aa15.9■□□□□ 0.14
RUNX1-213ENST00000469087 SIL1Q9H173 461 aa15.9■□□□□ 0.14
RUNX1-213ENST00000469087 MYH3P11055 1940 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms