RNA–Protein interactions for RNA: ENST00000468915.5

SLC13A3-209, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5

Gene SLC13A3, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-209ENST00000468915 NIP7Q9Y221 180 aaKnown RBP eCLIP18.8■□□□□ 0.6
SLC13A3-209ENST00000468915 ZNF652Q9Y2D9 606 aa18.8■□□□□ 0.6
SLC13A3-209ENST00000468915 UTYO14607 1347 aa18.8■□□□□ 0.6
SLC13A3-209ENST00000468915 SOCS7O14512 581 aa18.79■□□□□ 0.6
SLC13A3-209ENST00000468915 NBPF7P0C2Y1 421 aaPredicted RBP18.79■□□□□ 0.6
SLC13A3-209ENST00000468915 SUSD4Q5VX71 490 aa18.79■□□□□ 0.6
SLC13A3-209ENST00000468915 SYNE4Q8N205 404 aa18.79■□□□□ 0.6
SLC13A3-209ENST00000468915 DDX60Q8IY21 1712 aaKnown RBP18.78■□□□□ 0.6
SLC13A3-209ENST00000468915 H7C1W4 665 aa18.78■□□□□ 0.6
SLC13A3-209ENST00000468915 JARID2Q92833 1246 aaPredicted RBP18.78■□□□□ 0.6
SLC13A3-209ENST00000468915 CWC25Q9NXE8 425 aaPredicted RBP18.78■□□□□ 0.6
SLC13A3-209ENST00000468915 PSDA5PKW4 1024 aaPredicted RBP18.77■□□□□ 0.6
SLC13A3-209ENST00000468915 MSH5O43196 834 aa18.77■□□□□ 0.6
SLC13A3-209ENST00000468915 NTSR2O95665 410 aa18.77■□□□□ 0.6
SLC13A3-209ENST00000468915 BICDL1Q6ZP65 573 aa18.77■□□□□ 0.6
SLC13A3-209ENST00000468915 KAZALD1Q96I82 304 aa18.77■□□□□ 0.6
SLC13A3-209ENST00000468915 ZBTB40Q9NUA8 1239 aa18.77■□□□□ 0.6
SLC13A3-209ENST00000468915 GRM8O00222 908 aa18.76■□□□□ 0.59
SLC13A3-209ENST00000468915 MSL1Q68DK7 614 aa18.76■□□□□ 0.59
SLC13A3-209ENST00000468915 NLGN1Q8N2Q7 840 aa18.76■□□□□ 0.59
SLC13A3-209ENST00000468915 DDX19BQ9UMR2 479 aa18.76■□□□□ 0.59
SLC13A3-209ENST00000468915 LAMB2P55268 1798 aa18.76■□□□□ 0.59
SLC13A3-209ENST00000468915 POLRMTO00411 1230 aaKnown RBP18.76■□□□□ 0.59
SLC13A3-209ENST00000468915 PARP10Q53GL7 1025 aa18.76■□□□□ 0.59
SLC13A3-209ENST00000468915 SLC16A10Q8TF71 515 aa18.75■□□□□ 0.59
SLC13A3-209ENST00000468915 SETDB2Q96T68 719 aa18.75■□□□□ 0.59
SLC13A3-209ENST00000468915 CARMIL3Q8ND23 1372 aa18.74■□□□□ 0.59
SLC13A3-209ENST00000468915 PCCAP05165 728 aaPredicted RBP18.74■□□□□ 0.59
SLC13A3-209ENST00000468915 UBE3BQ7Z3V4 1068 aa18.74■□□□□ 0.59
SLC13A3-209ENST00000468915 FAM89AQ96GI7 184 aa18.74■□□□□ 0.59
SLC13A3-209ENST00000468915 ANKRD31Q8N7Z5 1873 aa18.73■□□□□ 0.59
SLC13A3-209ENST00000468915 TNRC6CQ9HCJ0 1690 aaKnown RBP18.73■□□□□ 0.59
SLC13A3-209ENST00000468915 EPHA10Q5JZY3 1008 aa18.73■□□□□ 0.59
SLC13A3-209ENST00000468915 ZBTB38Q8NAP3 1195 aaPredicted RBP18.73■□□□□ 0.59
SLC13A3-209ENST00000468915 ABCC12Q96J65 1359 aa18.73■□□□□ 0.59
SLC13A3-209ENST00000468915 FAM177BA6PVY3 158 aa18.72■□□□□ 0.59
SLC13A3-209ENST00000468915 MMP10P09238 476 aa18.72■□□□□ 0.59
SLC13A3-209ENST00000468915 RTL5Q5HYW3 569 aaPredicted RBP18.72■□□□□ 0.59
SLC13A3-209ENST00000468915 NUTM1Q86Y26 1132 aa18.72■□□□□ 0.59
SLC13A3-209ENST00000468915 SUCLG2Q96I99 432 aa18.72■□□□□ 0.59
SLC13A3-209ENST00000468915 UTP14AQ9BVJ6 771 aaKnown RBP18.72■□□□□ 0.59
SLC13A3-209ENST00000468915 TRMT112Q9UI30 125 aaKnown RBP18.72■□□□□ 0.59
SLC13A3-209ENST00000468915 CDHR2Q9BYE9 1310 aa18.72■□□□□ 0.59
SLC13A3-209ENST00000468915 MYH3P11055 1940 aa18.72■□□□□ 0.59
SLC13A3-209ENST00000468915 SGIP1Q9BQI5 828 aa18.72■□□□□ 0.59
SLC13A3-209ENST00000468915 C1orf115Q9H7X2 142 aa18.72■□□□□ 0.59
SLC13A3-209ENST00000468915 C9orf78Q9NZ63 289 aaPredicted RBP18.72■□□□□ 0.59
SLC13A3-209ENST00000468915 ZBTB7AO95365 584 aa18.71■□□□□ 0.59
SLC13A3-209ENST00000468915 SERPINB2P05120 415 aa18.71■□□□□ 0.59
SLC13A3-209ENST00000468915 ERFEQ4G0M1 354 aa18.71■□□□□ 0.59
SLC13A3-209ENST00000468915 PRR5LQ6MZQ0 368 aa18.71■□□□□ 0.59
SLC13A3-209ENST00000468915 GNAI3P08754 354 aa18.7■□□□□ 0.58
SLC13A3-209ENST00000468915 FOXO4P98177 505 aa18.7■□□□□ 0.58
SLC13A3-209ENST00000468915 SLC10A5Q5PT55 438 aa18.7■□□□□ 0.58
SLC13A3-209ENST00000468915 PPP1R42Q7Z4L9 355 aa18.7■□□□□ 0.58
SLC13A3-209ENST00000468915 CCDC24Q8N4L8 307 aa18.7■□□□□ 0.58
SLC13A3-209ENST00000468915 ANKRD44Q8N8A2 993 aa18.7■□□□□ 0.58
SLC13A3-209ENST00000468915 PCDHB15Q9Y5E8 787 aa18.7■□□□□ 0.58
SLC13A3-209ENST00000468915 LRRFIP2Q9Y608 721 aaKnown RBP18.7■□□□□ 0.58
SLC13A3-209ENST00000468915 SH3TC1Q8TE82 1336 aa18.7■□□□□ 0.58
SLC13A3-209ENST00000468915 UBTFL1P0CB47 393 aaPredicted RBP18.69■□□□□ 0.58
SLC13A3-209ENST00000468915 C3orf67Q6ZVT6 689 aa18.69■□□□□ 0.58
SLC13A3-209ENST00000468915 NBPF5PQ86XG9 351 aaPredicted RBP18.69■□□□□ 0.58
SLC13A3-209ENST00000468915 PLA2G12BQ9BX93 195 aa18.69■□□□□ 0.58
SLC13A3-209ENST00000468915 MTFR1LQ9H019 292 aa18.69■□□□□ 0.58
SLC13A3-209ENST00000468915 SIRT2Q8IXJ6 389 aa18.68■□□□□ 0.58
SLC13A3-209ENST00000468915 COL4A1P02462 1669 aa18.68■□□□□ 0.58
SLC13A3-209ENST00000468915 RIC1Q4ADV7 1423 aa18.68■□□□□ 0.58
SLC13A3-209ENST00000468915 IRS4O14654 1257 aaPredicted RBP18.68■□□□□ 0.58
SLC13A3-209ENST00000468915 HCLS1P14317 486 aaPredicted RBP18.68■□□□□ 0.58
SLC13A3-209ENST00000468915 PTGER2P43116 358 aa18.68■□□□□ 0.58
SLC13A3-209ENST00000468915 RABL6Q3YEC7 729 aaPredicted RBP18.68■□□□□ 0.58
SLC13A3-209ENST00000468915 ATF5Q9Y2D1 282 aaPredicted RBP18.68■□□□□ 0.58
SLC13A3-209ENST00000468915 GNAI2P04899 355 aa18.67■□□□□ 0.58
SLC13A3-209ENST00000468915 TPTE2Q6XPS3 522 aa18.67■□□□□ 0.58
SLC13A3-209ENST00000468915 NYXQ9GZU5 481 aa18.67■□□□□ 0.58
SLC13A3-209ENST00000468915 BICC1Q9H694 974 aaKnown RBP18.67■□□□□ 0.58
SLC13A3-209ENST00000468915 KIF13BQ9NQT8 1826 aa18.66■□□□□ 0.58
SLC13A3-209ENST00000468915 NEFLP07196 543 aa18.66■□□□□ 0.58
SLC13A3-209ENST00000468915 CNBD1Q8NA66 436 aa18.66■□□□□ 0.58
SLC13A3-209ENST00000468915 CSF1RP07333 972 aa18.65■□□□□ 0.58
SLC13A3-209ENST00000468915 MTX1Q13505 466 aa18.65■□□□□ 0.58
SLC13A3-209ENST00000468915 CEP85Q6P2H3 762 aa18.65■□□□□ 0.58
SLC13A3-209ENST00000468915 TAF1P21675 1872 aa18.65■□□□□ 0.58
SLC13A3-209ENST00000468915 COL11A2P13942 1736 aaPredicted RBP18.64■□□□□ 0.58
SLC13A3-209ENST00000468915 KIAA1551Q9HCM1 1747 aa18.64■□□□□ 0.58
SLC13A3-209ENST00000468915 AAMPQ13685 434 aa18.64■□□□□ 0.58
SLC13A3-209ENST00000468915 PARP3Q9Y6F1 533 aa18.64■□□□□ 0.58
SLC13A3-209ENST00000468915 PNMA6EA0A0J9YXQ4 647 aa18.64■□□□□ 0.57
SLC13A3-209ENST00000468915 KLRG2A4D1S0 409 aaPredicted RBP18.64■□□□□ 0.57
SLC13A3-209ENST00000468915 PDE8AO60658 829 aa18.64■□□□□ 0.57
SLC13A3-209ENST00000468915 TTLL11Q8NHH1 800 aa18.64■□□□□ 0.57
SLC13A3-209ENST00000468915 CHMP4BQ9H444 224 aaKnown RBP18.64■□□□□ 0.57
SLC13A3-209ENST00000468915 C10orf71Q711Q0 1435 aa18.63■□□□□ 0.57
SLC13A3-209ENST00000468915 LMBR1LQ6UX01 489 aa18.63■□□□□ 0.57
SLC13A3-209ENST00000468915 CTSWP56202 376 aa18.62■□□□□ 0.57
SLC13A3-209ENST00000468915 ATP8B2P98198 1209 aa18.62■□□□□ 0.57
SLC13A3-209ENST00000468915 RFX5P48382 616 aaPredicted RBP18.61■□□□□ 0.57
SLC13A3-209ENST00000468915 POLA2Q14181 598 aa18.61■□□□□ 0.57
SLC13A3-209ENST00000468915 SF3B3Q15393 1217 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms