RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 FOXO4P98177 505 aa18.59■□□□□ 0.57
CRAMP1-206ENST00000468839 C8orf34Q49A92 452 aa18.59■□□□□ 0.57
CRAMP1-206ENST00000468839 NLRP10Q86W26 655 aa18.59■□□□□ 0.57
CRAMP1-206ENST00000468839 PLEKHM2Q8IWE5 1019 aa18.59■□□□□ 0.57
CRAMP1-206ENST00000468839 RBM19Q9Y4C8 960 aaKnown RBP18.59■□□□□ 0.57
CRAMP1-206ENST00000468839 SCN7AQ01118 1682 aa18.59■□□□□ 0.57
CRAMP1-206ENST00000468839 SMARCA5O60264 1052 aaPredicted RBP18.58■□□□□ 0.56
CRAMP1-206ENST00000468839 ZBTB38Q8NAP3 1195 aaPredicted RBP18.58■□□□□ 0.56
CRAMP1-206ENST00000468839 JARID2Q92833 1246 aaPredicted RBP18.58■□□□□ 0.56
CRAMP1-206ENST00000468839 PLA2G12BQ9BX93 195 aa18.58■□□□□ 0.56
CRAMP1-206ENST00000468839 RGS17Q9UGC6 210 aaPredicted RBP18.58■□□□□ 0.56
CRAMP1-206ENST00000468839 UBR3Q6ZT12 1888 aa18.58■□□□□ 0.56
CRAMP1-206ENST00000468839 CDHR2Q9BYE9 1310 aa18.57■□□□□ 0.56
CRAMP1-206ENST00000468839 C16orf71Q8IYS4 520 aaPredicted RBP18.57■□□□□ 0.56
CRAMP1-206ENST00000468839 KIF1BPQ96EK5 621 aa18.57■□□□□ 0.56
CRAMP1-206ENST00000468839 LAMB2P55268 1798 aa18.57■□□□□ 0.56
CRAMP1-206ENST00000468839 APBB1O00213 710 aa18.56■□□□□ 0.56
CRAMP1-206ENST00000468839 HMGB2P26583 209 aaKnown RBP18.56■□□□□ 0.56
CRAMP1-206ENST00000468839 RFX5P48382 616 aaPredicted RBP18.56■□□□□ 0.56
CRAMP1-206ENST00000468839 KCNQ4P56696 695 aa18.56■□□□□ 0.56
CRAMP1-206ENST00000468839 CLEC4GQ6UXB4 293 aa18.56■□□□□ 0.56
CRAMP1-206ENST00000468839 ERC1Q8IUD2 1116 aa18.56■□□□□ 0.56
CRAMP1-206ENST00000468839 RHPN1Q8TCX5 695 aa18.56■□□□□ 0.56
CRAMP1-206ENST00000468839 OSBPL3Q9H4L5 887 aa18.56■□□□□ 0.56
CRAMP1-206ENST00000468839 COPRSQ9NQ92 184 aa18.56■□□□□ 0.56
CRAMP1-206ENST00000468839 C4AP0C0L4 1744 aa18.56■□□□□ 0.56
CRAMP1-206ENST00000468839 SALL3Q9BXA9 1300 aa18.55■□□□□ 0.56
CRAMP1-206ENST00000468839 AK9Q5TCS8 1911 aa18.55■□□□□ 0.56
CRAMP1-206ENST00000468839 BMP2KLQ5H9B9 411 aa18.55■□□□□ 0.56
CRAMP1-206ENST00000468839 SLC27A3Q5K4L6 730 aa18.55■□□□□ 0.56
CRAMP1-206ENST00000468839 TRIM37O94972 964 aa18.54■□□□□ 0.56
CRAMP1-206ENST00000468839 GPTP24298 496 aa18.54■□□□□ 0.56
CRAMP1-206ENST00000468839 PARP10Q53GL7 1025 aa18.54■□□□□ 0.56
CRAMP1-206ENST00000468839 LMBR1LQ6UX01 489 aa18.54■□□□□ 0.56
CRAMP1-206ENST00000468839 ZNF652Q9Y2D9 606 aa18.54■□□□□ 0.56
CRAMP1-206ENST00000468839 DDX60Q8IY21 1712 aaKnown RBP18.54■□□□□ 0.56
CRAMP1-206ENST00000468839 RGPD3A6NKT7 1758 aaPredicted RBP18.53■□□□□ 0.56
CRAMP1-206ENST00000468839 RGPD4Q7Z3J3 1758 aa18.53■□□□□ 0.56
CRAMP1-206ENST00000468839 CASZ1Q86V15 1759 aa18.53■□□□□ 0.56
CRAMP1-206ENST00000468839 G3BP1Q13283 466 aaKnown RBP eCLIP18.53■□□□□ 0.56
CRAMP1-206ENST00000468839 POTEAQ6S8J7 498 aa18.53■□□□□ 0.56
CRAMP1-206ENST00000468839 STAP2Q9UGK3 403 aa18.53■□□□□ 0.56
CRAMP1-206ENST00000468839 PA2G4Q9UQ80 394 aaKnown RBP18.53■□□□□ 0.56
CRAMP1-206ENST00000468839 UBN2Q6ZU65 1347 aa18.52■□□□□ 0.56
CRAMP1-206ENST00000468839 TNS1Q9HBL0 1735 aaKnown RBP18.52■□□□□ 0.56
CRAMP1-206ENST00000468839 CSF1RP07333 972 aa18.52■□□□□ 0.56
CRAMP1-206ENST00000468839 PTPN12Q05209 780 aaKnown RBP18.52■□□□□ 0.56
CRAMP1-206ENST00000468839 FAM89AQ96GI7 184 aa18.52■□□□□ 0.56
CRAMP1-206ENST00000468839 LRRC4BQ9NT99 713 aa18.52■□□□□ 0.56
CRAMP1-206ENST00000468839 NARFQ9UHQ1 456 aa18.52■□□□□ 0.56
CRAMP1-206ENST00000468839 RTCBQ9Y3I0 505 aaKnown RBP18.52■□□□□ 0.56
CRAMP1-206ENST00000468839 PLSCR1O15162 318 aa18.51■□□□□ 0.55
CRAMP1-206ENST00000468839 PDE1AP54750 535 aa18.51■□□□□ 0.55
CRAMP1-206ENST00000468839 RTL5Q5HYW3 569 aaPredicted RBP18.51■□□□□ 0.55
CRAMP1-206ENST00000468839 TTC22Q5TAA0 569 aa18.51■□□□□ 0.55
CRAMP1-206ENST00000468839 OTUD7AQ8TE49 926 aaPredicted RBP18.51■□□□□ 0.55
CRAMP1-206ENST00000468839 AK7Q96M32 723 aa18.51■□□□□ 0.55
CRAMP1-206ENST00000468839 COL24A1Q17RW2 1714 aa18.51■□□□□ 0.55
CRAMP1-206ENST00000468839 AOX1Q06278 1338 aa18.5■□□□□ 0.55
CRAMP1-206ENST00000468839 GNPATO15228 680 aa18.5■□□□□ 0.55
CRAMP1-206ENST00000468839 SASH1O94885 1247 aa18.5■□□□□ 0.55
CRAMP1-206ENST00000468839 OS9Q13438 667 aaPredicted RBP18.5■□□□□ 0.55
CRAMP1-206ENST00000468839 TRMT112Q9UI30 125 aaKnown RBP18.5■□□□□ 0.55
CRAMP1-206ENST00000468839 SUSD4Q5VX71 490 aa18.49■□□□□ 0.55
CRAMP1-206ENST00000468839 UTP14AQ9BVJ6 771 aaKnown RBP18.49■□□□□ 0.55
CRAMP1-206ENST00000468839 IL1RAPL2Q9NP60 686 aa18.49■□□□□ 0.55
CRAMP1-206ENST00000468839 IRS4O14654 1257 aaPredicted RBP18.48■□□□□ 0.55
CRAMP1-206ENST00000468839 PDE8AO60658 829 aa18.48■□□□□ 0.55
CRAMP1-206ENST00000468839 ADRA2BP18089 450 aa18.48■□□□□ 0.55
CRAMP1-206ENST00000468839 MX1P20591 662 aa18.48■□□□□ 0.55
CRAMP1-206ENST00000468839 CLASRPQ8N2M8 674 aaKnown RBP18.48■□□□□ 0.55
CRAMP1-206ENST00000468839 BCL2L12Q9HB09 334 aa18.48■□□□□ 0.55
CRAMP1-206ENST00000468839 FBXO3Q9UK99 471 aa18.48■□□□□ 0.55
CRAMP1-206ENST00000468839 NIP7Q9Y221 180 aaKnown RBP eCLIP18.48■□□□□ 0.55
CRAMP1-206ENST00000468839 SH3TC1Q8TE82 1336 aa18.48■□□□□ 0.55
CRAMP1-206ENST00000468839 USP42Q9H9J4 1324 aaKnown RBP18.48■□□□□ 0.55
CRAMP1-206ENST00000468839 HSP90B1P14625 803 aaKnown RBP18.47■□□□□ 0.55
CRAMP1-206ENST00000468839 GSPT1P15170 499 aaKnown RBP18.47■□□□□ 0.55
CRAMP1-206ENST00000468839 SYNE4Q8N205 404 aa18.47■□□□□ 0.55
CRAMP1-206ENST00000468839 KLHDC4Q8TBB5 520 aa18.47■□□□□ 0.55
CRAMP1-206ENST00000468839 ARHGEF1Q92888 912 aaKnown RBP18.47■□□□□ 0.55
CRAMP1-206ENST00000468839 ZPR1O75312 459 aa18.46■□□□□ 0.55
CRAMP1-206ENST00000468839 NTSR2O95665 410 aa18.46■□□□□ 0.55
CRAMP1-206ENST00000468839 TXNRD1Q16881 649 aa18.46■□□□□ 0.55
CRAMP1-206ENST00000468839 TRAPPC3LQ5T215 181 aa18.46■□□□□ 0.55
CRAMP1-206ENST00000468839 PROM2Q8N271 834 aa18.46■□□□□ 0.55
CRAMP1-206ENST00000468839 TTLL11Q8NHH1 800 aa18.46■□□□□ 0.55
CRAMP1-206ENST00000468839 CHMP3Q9Y3E7 222 aa18.46■□□□□ 0.55
CRAMP1-206ENST00000468839 CIAO1O76071 339 aa18.45■□□□□ 0.54
CRAMP1-206ENST00000468839 CTSWP56202 376 aa18.45■□□□□ 0.54
CRAMP1-206ENST00000468839 CCDC57Q2TAC2 916 aa18.45■□□□□ 0.54
CRAMP1-206ENST00000468839 USPL1Q5W0Q7 1092 aa18.45■□□□□ 0.54
CRAMP1-206ENST00000468839 SIL1Q9H173 461 aa18.45■□□□□ 0.54
CRAMP1-206ENST00000468839 TTC41PQ6P2S7 1318 aa18.45■□□□□ 0.54
CRAMP1-206ENST00000468839 NUTM1Q86Y26 1132 aa18.44■□□□□ 0.54
CRAMP1-206ENST00000468839 EYA2O00167 538 aa18.43■□□□□ 0.54
CRAMP1-206ENST00000468839 APBA3O96018 575 aa18.43■□□□□ 0.54
CRAMP1-206ENST00000468839 SSFA2P28290 1259 aa18.43■□□□□ 0.54
CRAMP1-206ENST00000468839 IL15P40933 162 aaPredicted RBP18.43■□□□□ 0.54
CRAMP1-206ENST00000468839 IFIT5Q13325 482 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms