RNA–Protein interactions for RNA: ENST00000468197.3

RN7SL554P-201, Transcript of RNA, 7SL, cytoplasmic 554, pseudogene, humanhuman

BASIC

Gene RN7SL554P, Length 292 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL554P-201ENST00000468197 ZNF853P0CG23 659 aa11.36□□□□□ -0.59
RN7SL554P-201ENST00000468197 HOXA10P31260 410 aaPredicted RBP11.36□□□□□ -0.59
RN7SL554P-201ENST00000468197 CCDC184Q52MB2 194 aa11.36□□□□□ -0.59
RN7SL554P-201ENST00000468197 CC2D2BQ6DHV5 1058 aa11.36□□□□□ -0.59
RN7SL554P-201ENST00000468197 ANKRD13DQ6ZTN6 518 aa11.36□□□□□ -0.59
RN7SL554P-201ENST00000468197 SMC1BQ8NDV3 1235 aa11.36□□□□□ -0.59
RN7SL554P-201ENST00000468197 PLBD2Q8NHP8 589 aa11.36□□□□□ -0.59
RN7SL554P-201ENST00000468197 MRS2Q9HD23 443 aa11.36□□□□□ -0.59
RN7SL554P-201ENST00000468197 TRMT112Q9UI30 125 aaKnown RBP11.36□□□□□ -0.59
RN7SL554P-201ENST00000468197 TCERG1O14776 1098 aaKnown RBP11.35□□□□□ -0.59
RN7SL554P-201ENST00000468197 SLC10A5Q5PT55 438 aa11.35□□□□□ -0.59
RN7SL554P-201ENST00000468197 NLRP10Q86W26 655 aa11.35□□□□□ -0.59
RN7SL554P-201ENST00000468197 SYNE4Q8N205 404 aa11.35□□□□□ -0.59
RN7SL554P-201ENST00000468197 CRAMP1Q96RY5 1269 aa11.35□□□□□ -0.59
RN7SL554P-201ENST00000468197 CHMP4AQ9BY43 222 aa11.35□□□□□ -0.59
RN7SL554P-201ENST00000468197 BRCA1P38398 1863 aaKnown RBP11.35□□□□□ -0.59
RN7SL554P-201ENST00000468197 ARFGEF1Q9Y6D6 1849 aa11.35□□□□□ -0.59
RN7SL554P-201ENST00000468197 RNF123Q5XPI4 1314 aa11.35□□□□□ -0.59
RN7SL554P-201ENST00000468197 CEP350Q5VT06 3117 aa11.34□□□□□ -0.59
RN7SL554P-201ENST00000468197 KDM3BQ7LBC6 1761 aa11.34□□□□□ -0.59
RN7SL554P-201ENST00000468197 PPEF1O14829 653 aaPredicted RBP11.34□□□□□ -0.59
RN7SL554P-201ENST00000468197 DDNO94850 711 aaPredicted RBP11.34□□□□□ -0.59
RN7SL554P-201ENST00000468197 HCLS1P14317 486 aaPredicted RBP11.34□□□□□ -0.59
RN7SL554P-201ENST00000468197 GOLGA2Q08379 1002 aa11.34□□□□□ -0.59
RN7SL554P-201ENST00000468197 GRIPAP1Q4V328 841 aa11.34□□□□□ -0.59
RN7SL554P-201ENST00000468197 C3orf67Q6ZVT6 689 aa11.34□□□□□ -0.59
RN7SL554P-201ENST00000468197 JDP2Q8WYK2 163 aa11.34□□□□□ -0.59
RN7SL554P-201ENST00000468197 ZNF428Q96B54 188 aa11.34□□□□□ -0.59
RN7SL554P-201ENST00000468197 SH3TC1Q8TE82 1336 aa11.34□□□□□ -0.59
RN7SL554P-201ENST00000468197 ATP5J2-PTCD1G3V325 749 aa11.33□□□□□ -0.6
RN7SL554P-201ENST00000468197 IARSP41252 1262 aaKnown RBP11.33□□□□□ -0.6
RN7SL554P-201ENST00000468197 RIC3Q7Z5B4 369 aa11.33□□□□□ -0.6
RN7SL554P-201ENST00000468197 PSMD1Q99460 953 aa11.33□□□□□ -0.6
RN7SL554P-201ENST00000468197 DLG5Q8TDM6 1919 aa11.33□□□□□ -0.6
RN7SL554P-201ENST00000468197 BCORQ6W2J9 1755 aa11.32□□□□□ -0.6
RN7SL554P-201ENST00000468197 IQCA1LA6NCM1 817 aa11.32□□□□□ -0.6
RN7SL554P-201ENST00000468197 CCDC30Q5VVM6 783 aa11.32□□□□□ -0.6
RN7SL554P-201ENST00000468197 DDX46Q7L014 1031 aaKnown RBP11.32□□□□□ -0.6
RN7SL554P-201ENST00000468197 C8orf58Q8NAV2 365 aa11.32□□□□□ -0.6
RN7SL554P-201ENST00000468197 POTECB2RU33 542 aa11.31□□□□□ -0.6
RN7SL554P-201ENST00000468197 BBOX1O75936 387 aa11.31□□□□□ -0.6
RN7SL554P-201ENST00000468197 CCDC27Q2M243 656 aa11.31□□□□□ -0.6
RN7SL554P-201ENST00000468197 WWC1Q8IX03 1113 aa11.31□□□□□ -0.6
RN7SL554P-201ENST00000468197 LARGE2Q8N3Y3 721 aa11.31□□□□□ -0.6
RN7SL554P-201ENST00000468197 FAM89AQ96GI7 184 aa11.31□□□□□ -0.6
RN7SL554P-201ENST00000468197 ISCA1Q9BUE6 129 aa11.31□□□□□ -0.6
RN7SL554P-201ENST00000468197 ATP6V0A2Q9Y487 856 aa11.31□□□□□ -0.6
RN7SL554P-201ENST00000468197 RIC1Q4ADV7 1423 aa11.31□□□□□ -0.6
RN7SL554P-201ENST00000468197 ANKRD31Q8N7Z5 1873 aa11.31□□□□□ -0.6
RN7SL554P-201ENST00000468197 LAMB4A4D0S4 1761 aa11.31□□□□□ -0.6
RN7SL554P-201ENST00000468197 DDX58O95786 925 aaKnown RBP11.3□□□□□ -0.6
RN7SL554P-201ENST00000468197 EIF6P56537 245 aaKnown RBP11.3□□□□□ -0.6
RN7SL554P-201ENST00000468197 RTL5Q5HYW3 569 aaPredicted RBP11.3□□□□□ -0.6
RN7SL554P-201ENST00000468197 TSR2Q969E8 191 aaKnown RBP11.3□□□□□ -0.6
RN7SL554P-201ENST00000468197 PHAXQ9H814 394 aaKnown RBP11.3□□□□□ -0.6
RN7SL554P-201ENST00000468197 SALL2Q9Y467 1007 aaPredicted RBP11.3□□□□□ -0.6
RN7SL554P-201ENST00000468197 ABCC4O15439 1325 aa11.3□□□□□ -0.6
RN7SL554P-201ENST00000468197 ZNF541Q9H0D2 1346 aa11.3□□□□□ -0.6
RN7SL554P-201ENST00000468197 SLX4Q8IY92 1834 aa11.3□□□□□ -0.6
RN7SL554P-201ENST00000468197 COL11A2P13942 1736 aaPredicted RBP11.29□□□□□ -0.6
RN7SL554P-201ENST00000468197 DLEC1Q9Y238 1755 aa11.29□□□□□ -0.6
RN7SL554P-201ENST00000468197 FZD9O00144 591 aa11.29□□□□□ -0.6
RN7SL554P-201ENST00000468197 HSP90B1P14625 803 aaKnown RBP11.29□□□□□ -0.6
RN7SL554P-201ENST00000468197 HTRA3P83110 453 aa11.29□□□□□ -0.6
RN7SL554P-201ENST00000468197 TRIM28Q13263 835 aaKnown RBP11.29□□□□□ -0.6
RN7SL554P-201ENST00000468197 GRAPQ13588 217 aa11.29□□□□□ -0.6
RN7SL554P-201ENST00000468197 DPP8Q6V1X1 898 aaPredicted RBP11.29□□□□□ -0.6
RN7SL554P-201ENST00000468197 NIM1KQ8IY84 436 aa11.29□□□□□ -0.6
RN7SL554P-201ENST00000468197 TSPYL6Q8N831 410 aa11.29□□□□□ -0.6
RN7SL554P-201ENST00000468197 SUPT20HQ8NEM7 779 aa11.29□□□□□ -0.6
RN7SL554P-201ENST00000468197 GRAPLQ8TC17 118 aaPredicted RBP11.29□□□□□ -0.6
RN7SL554P-201ENST00000468197 L3MBTL3Q96JM7 780 aaPredicted RBP11.29□□□□□ -0.6
RN7SL554P-201ENST00000468197 MYD88Q99836 296 aa11.29□□□□□ -0.6
RN7SL554P-201ENST00000468197 STK31Q9BXU1 1019 aa11.29□□□□□ -0.6
RN7SL554P-201ENST00000468197 GJA3Q9Y6H8 435 aa11.29□□□□□ -0.6
RN7SL554P-201ENST00000468197 IRS4O14654 1257 aaPredicted RBP11.28□□□□□ -0.6
RN7SL554P-201ENST00000468197 PPIP5K2O43314 1243 aa11.28□□□□□ -0.6
RN7SL554P-201ENST00000468197 EAPPQ56P03 285 aaPredicted RBP11.28□□□□□ -0.6
RN7SL554P-201ENST00000468197 CHADLQ6NUI6 762 aa11.28□□□□□ -0.6
RN7SL554P-201ENST00000468197 SP8Q8IXZ3 490 aa11.28□□□□□ -0.6
RN7SL554P-201ENST00000468197 GPC2Q8N158 579 aa11.28□□□□□ -0.6
RN7SL554P-201ENST00000468197 MPNDQ8N594 471 aa11.28□□□□□ -0.6
RN7SL554P-201ENST00000468197 TAF1DQ9H5J8 278 aaPredicted RBP11.28□□□□□ -0.6
RN7SL554P-201ENST00000468197 HACL1Q9UJ83 578 aa11.28□□□□□ -0.6
RN7SL554P-201ENST00000468197 CLEC11AQ9Y240 323 aa11.28□□□□□ -0.6
RN7SL554P-201ENST00000468197 LMOD1P29536 600 aaPredicted RBP11.27□□□□□ -0.61
RN7SL554P-201ENST00000468197 SF3B3Q15393 1217 aaKnown RBP11.27□□□□□ -0.61
RN7SL554P-201ENST00000468197 AOC3Q16853 763 aa11.27□□□□□ -0.61
RN7SL554P-201ENST00000468197 TWISTNBQ3B726 338 aaPredicted RBP11.27□□□□□ -0.61
RN7SL554P-201ENST00000468197 NCBP3Q53F19 620 aaKnown RBP11.27□□□□□ -0.61
RN7SL554P-201ENST00000468197 TMC4Q7Z404 712 aa11.27□□□□□ -0.61
RN7SL554P-201ENST00000468197 SLC51AQ86UW1 340 aa11.27□□□□□ -0.61
RN7SL554P-201ENST00000468197 FAM9BQ8IZU0 186 aa11.27□□□□□ -0.61
RN7SL554P-201ENST00000468197 DNAJC5GQ8N7S2 189 aa11.27□□□□□ -0.61
RN7SL554P-201ENST00000468197 ZBTB38Q8NAP3 1195 aaPredicted RBP11.27□□□□□ -0.61
RN7SL554P-201ENST00000468197 VPS33BQ9H267 617 aa11.27□□□□□ -0.61
RN7SL554P-201ENST00000468197 IL16Q14005 1332 aa11.27□□□□□ -0.61
RN7SL554P-201ENST00000468197 POTEIP0CG38 1075 aa11.26□□□□□ -0.61
RN7SL554P-201ENST00000468197 POTEJP0CG39 1038 aa11.26□□□□□ -0.61
RN7SL554P-201ENST00000468197 EPHX2P34913 555 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms