RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 TBC1D9Q6ZT07 1266 aa23.14■■□□□ 1.29
CHRNA4-203ENST00000467563 NUTM1Q86Y26 1132 aa23.14■■□□□ 1.29
CHRNA4-203ENST00000467563 NHSQ6T4R5 1651 aa23.14■■□□□ 1.29
CHRNA4-203ENST00000467563 ERVV-1B6SEH8 477 aa23.13■■□□□ 1.29
CHRNA4-203ENST00000467563 LMBR1LQ6UX01 489 aa23.13■■□□□ 1.29
CHRNA4-203ENST00000467563 ZNF831Q5JPB2 1677 aa23.13■■□□□ 1.29
CHRNA4-203ENST00000467563 MFAP1P55081 439 aaKnown RBP23.13■■□□□ 1.29
CHRNA4-203ENST00000467563 KCNQ4P56696 695 aa23.13■■□□□ 1.29
CHRNA4-203ENST00000467563 ERC1Q8IUD2 1116 aa23.13■■□□□ 1.29
CHRNA4-203ENST00000467563 SIL1Q9H173 461 aa23.13■■□□□ 1.29
CHRNA4-203ENST00000467563 BTAF1O14981 1849 aa23.13■■□□□ 1.29
CHRNA4-203ENST00000467563 CDC45O75419 566 aa23.12■■□□□ 1.29
CHRNA4-203ENST00000467563 SASH1O94885 1247 aa23.12■■□□□ 1.29
CHRNA4-203ENST00000467563 GPTP24298 496 aa23.12■■□□□ 1.29
CHRNA4-203ENST00000467563 G3BP1Q13283 466 aaKnown RBP eCLIP23.12■■□□□ 1.29
CHRNA4-203ENST00000467563 LINC00116Q8NCU8 138 aa23.12■■□□□ 1.29
CHRNA4-203ENST00000467563 UPF2Q9HAU5 1272 aaKnown RBP23.12■■□□□ 1.29
CHRNA4-203ENST00000467563 COL5A3P25940 1745 aaPredicted RBP23.12■■□□□ 1.29
CHRNA4-203ENST00000467563 PTPN12Q05209 780 aaKnown RBP23.12■■□□□ 1.29
CHRNA4-203ENST00000467563 HSP90AB3PQ58FF7 597 aa23.12■■□□□ 1.29
CHRNA4-203ENST00000467563 NLRP10Q86W26 655 aa23.12■■□□□ 1.29
CHRNA4-203ENST00000467563 COPRSQ9NQ92 184 aa23.12■■□□□ 1.29
CHRNA4-203ENST00000467563 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.12■■□□□ 1.29
CHRNA4-203ENST00000467563 TBC1D32Q96NH3 1257 aa23.11■■□□□ 1.29
CHRNA4-203ENST00000467563 PCCAP05165 728 aaPredicted RBP23.1■■□□□ 1.29
CHRNA4-203ENST00000467563 ZBTB38Q8NAP3 1195 aaPredicted RBP23.1■■□□□ 1.29
CHRNA4-203ENST00000467563 FAM89AQ96GI7 184 aa23.1■■□□□ 1.29
CHRNA4-203ENST00000467563 CLASRPQ8N2M8 674 aaKnown RBP23.09■■□□□ 1.29
CHRNA4-203ENST00000467563 NUP98P52948 1817 aa23.09■■□□□ 1.29
CHRNA4-203ENST00000467563 AOX1Q06278 1338 aa23.09■■□□□ 1.29
CHRNA4-203ENST00000467563 ANKRD36CQ5JPF3 1778 aa23.08■■□□□ 1.29
CHRNA4-203ENST00000467563 CHMP3Q9Y3E7 222 aa23.08■■□□□ 1.29
CHRNA4-203ENST00000467563 CAMTA2O94983 1202 aa23.07■■□□□ 1.28
CHRNA4-203ENST00000467563 ZNF34Q8IZ26 560 aa23.07■■□□□ 1.28
CHRNA4-203ENST00000467563 SYNE4Q8N205 404 aa23.07■■□□□ 1.28
CHRNA4-203ENST00000467563 UBN2Q6ZU65 1347 aa23.07■■□□□ 1.28
CHRNA4-203ENST00000467563 SBF2Q86WG5 1849 aa23.07■■□□□ 1.28
CHRNA4-203ENST00000467563 PI4K2BQ8TCG2 481 aa23.07■■□□□ 1.28
CHRNA4-203ENST00000467563 TUBGCP6Q96RT7 1819 aa23.07■■□□□ 1.28
CHRNA4-203ENST00000467563 PLA2G12BQ9BX93 195 aa23.05■■□□□ 1.28
CHRNA4-203ENST00000467563 USP42Q9H9J4 1324 aaKnown RBP23.05■■□□□ 1.28
CHRNA4-203ENST00000467563 AACSQ86V21 672 aa23.05■■□□□ 1.28
CHRNA4-203ENST00000467563 EAF2Q96CJ1 260 aaPredicted RBP23.05■■□□□ 1.28
CHRNA4-203ENST00000467563 C22orf23Q9BZE7 217 aa23.05■■□□□ 1.28
CHRNA4-203ENST00000467563 CNTNAP4Q9C0A0 1308 aa23.05■■□□□ 1.28
CHRNA4-203ENST00000467563 CDHR2Q9BYE9 1310 aa23.04■■□□□ 1.28
CHRNA4-203ENST00000467563 EP400Q96L91 3159 aa23.04■■□□□ 1.28
CHRNA4-203ENST00000467563 IFIT2P09913 472 aaKnown RBP23.03■■□□□ 1.28
CHRNA4-203ENST00000467563 DDRGK1Q96HY6 314 aa23.03■■□□□ 1.28
CHRNA4-203ENST00000467563 TRMT112Q9UI30 125 aaKnown RBP23.03■■□□□ 1.28
CHRNA4-203ENST00000467563 CCNL1Q9UK58 526 aaPredicted RBP23.03■■□□□ 1.28
CHRNA4-203ENST00000467563 TTC41PQ6P2S7 1318 aa23.02■■□□□ 1.28
CHRNA4-203ENST00000467563 BCL11BQ9C0K0 894 aaPredicted RBP23.02■■□□□ 1.28
CHRNA4-203ENST00000467563 TRIM6-TRIM34B2RNG4 842 aa23.01■■□□□ 1.27
CHRNA4-203ENST00000467563 CSF1RP07333 972 aa23.01■■□□□ 1.27
CHRNA4-203ENST00000467563 TFCP2Q12800 502 aa23.01■■□□□ 1.27
CHRNA4-203ENST00000467563 RC3H1Q5TC82 1133 aaKnown RBP23.01■■□□□ 1.27
CHRNA4-203ENST00000467563 KRT27Q7Z3Y8 459 aa23.01■■□□□ 1.27
CHRNA4-203ENST00000467563 RILPL2Q969X0 211 aa23.01■■□□□ 1.27
CHRNA4-203ENST00000467563 ZNF594Q96JF6 807 aaPredicted RBP23.01■■□□□ 1.27
CHRNA4-203ENST00000467563 CCDC8Q9H0W5 538 aaPredicted RBP23.01■■□□□ 1.27
CHRNA4-203ENST00000467563 TLR7Q9NYK1 1049 aaKnown RBP23.01■■□□□ 1.27
CHRNA4-203ENST00000467563 SUSD4Q5VX71 490 aa23■■□□□ 1.27
CHRNA4-203ENST00000467563 SMIM5Q71RC9 77 aa23■■□□□ 1.27
CHRNA4-203ENST00000467563 ATG9AQ7Z3C6 839 aa23■■□□□ 1.27
CHRNA4-203ENST00000467563 ECHDC1Q9NTX5 307 aa23■■□□□ 1.27
CHRNA4-203ENST00000467563 LY75O60449 1722 aa23■■□□□ 1.27
CHRNA4-203ENST00000467563 BRWD3Q6RI45 1802 aa23■■□□□ 1.27
CHRNA4-203ENST00000467563 IRS4O14654 1257 aaPredicted RBP22.99■■□□□ 1.27
CHRNA4-203ENST00000467563 CCDC85AQ96PX6 553 aaPredicted RBP22.99■■□□□ 1.27
CHRNA4-203ENST00000467563 MAP4K4O95819 1239 aaPredicted RBP22.99■■□□□ 1.27
CHRNA4-203ENST00000467563 CASC1Q6TDU7 716 aa22.99■■□□□ 1.27
CHRNA4-203ENST00000467563 GLRX3O76003 335 aaKnown RBP22.98■■□□□ 1.27
CHRNA4-203ENST00000467563 ZNF772Q68DY9 489 aaPredicted RBP22.98■■□□□ 1.27
CHRNA4-203ENST00000467563 RBM25P49756 843 aaKnown RBP22.97■■□□□ 1.27
CHRNA4-203ENST00000467563 CCDC57Q2TAC2 916 aa22.97■■□□□ 1.27
CHRNA4-203ENST00000467563 LRRC24Q50LG9 513 aa22.97■■□□□ 1.27
CHRNA4-203ENST00000467563 TNNI3KQ59H18 835 aa22.97■■□□□ 1.27
CHRNA4-203ENST00000467563 FAM196AQ6ZSG2 479 aa22.97■■□□□ 1.27
CHRNA4-203ENST00000467563 TTLL11Q8NHH1 800 aa22.97■■□□□ 1.27
CHRNA4-203ENST00000467563 GPATCH3Q96I76 525 aa22.97■■□□□ 1.27
CHRNA4-203ENST00000467563 FPGT-TNNI3KV9GXZ4 949 aa22.97■■□□□ 1.27
CHRNA4-203ENST00000467563 EYA2O00167 538 aa22.97■■□□□ 1.27
CHRNA4-203ENST00000467563 ERC2O15083 957 aa22.97■■□□□ 1.27
CHRNA4-203ENST00000467563 RPS6KA4O75676 772 aa22.97■■□□□ 1.27
CHRNA4-203ENST00000467563 CTSWP56202 376 aa22.97■■□□□ 1.27
CHRNA4-203ENST00000467563 NIP7Q9Y221 180 aaKnown RBP eCLIP22.97■■□□□ 1.27
CHRNA4-203ENST00000467563 BCORQ6W2J9 1755 aa22.96■■□□□ 1.27
CHRNA4-203ENST00000467563 RBM6P78332 1123 aaKnown RBP22.96■■□□□ 1.27
CHRNA4-203ENST00000467563 PARP10Q53GL7 1025 aa22.96■■□□□ 1.27
CHRNA4-203ENST00000467563 FAM177BA6PVY3 158 aa22.96■■□□□ 1.27
CHRNA4-203ENST00000467563 GNPATO15228 680 aa22.96■■□□□ 1.27
CHRNA4-203ENST00000467563 CLEC4GQ6UXB4 293 aa22.96■■□□□ 1.27
CHRNA4-203ENST00000467563 PUS3Q9BZE2 481 aaKnown RBP22.96■■□□□ 1.27
CHRNA4-203ENST00000467563 ZNF652Q9Y2D9 606 aa22.96■■□□□ 1.27
CHRNA4-203ENST00000467563 PDE8AO60658 829 aa22.95■■□□□ 1.26
CHRNA4-203ENST00000467563 CHMLP26374 656 aa22.95■■□□□ 1.26
CHRNA4-203ENST00000467563 IL15P40933 162 aaPredicted RBP22.95■■□□□ 1.26
CHRNA4-203ENST00000467563 AMIGO3Q86WK7 504 aa22.95■■□□□ 1.26
CHRNA4-203ENST00000467563 UTP14AQ9BVJ6 771 aaKnown RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms