RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 ZNF408Q9H9D4 720 aa5.94□□□□□ -1.46
CPS1-205ENST00000467353 SAGE1Q9NXZ1 904 aa5.94□□□□□ -1.46
CPS1-205ENST00000467353 COLQQ9Y215 455 aaPredicted RBP5.94□□□□□ -1.46
CPS1-205ENST00000467353 MYH14Q7Z406 1995 aaKnown RBP5.94□□□□□ -1.46
CPS1-205ENST00000467353 CASP8AP2Q9UKL3 1982 aa5.93□□□□□ -1.46
CPS1-205ENST00000467353 EIF5P55010 431 aaKnown RBP5.93□□□□□ -1.46
CPS1-205ENST00000467353 SLC39A6Q13433 755 aa5.93□□□□□ -1.46
CPS1-205ENST00000467353 EIF4A2Q14240 407 aaKnown RBP5.93□□□□□ -1.46
CPS1-205ENST00000467353 PLEKHO1Q53GL0 409 aaPredicted RBP5.93□□□□□ -1.46
CPS1-205ENST00000467353 AKAP4Q5JQC9 854 aa5.93□□□□□ -1.46
CPS1-205ENST00000467353 ZNF467Q7Z7K2 595 aaPredicted RBP5.93□□□□□ -1.46
CPS1-205ENST00000467353 RTKN2Q8IZC4 609 aa5.93□□□□□ -1.46
CPS1-205ENST00000467353 TESK2Q96S53 571 aa5.93□□□□□ -1.46
CPS1-205ENST00000467353 CSRNP1Q96S65 589 aa5.93□□□□□ -1.46
CPS1-205ENST00000467353 SIN3AQ96ST3 1273 aa5.93□□□□□ -1.46
CPS1-205ENST00000467353 CARD14Q9BXL6 1004 aa5.93□□□□□ -1.46
CPS1-205ENST00000467353 CARD11Q9BXL7 1154 aa5.93□□□□□ -1.46
CPS1-205ENST00000467353 PGAP2Q9UHJ9 254 aa5.93□□□□□ -1.46
CPS1-205ENST00000467353 TBC1D2BQ9UPU7 963 aa5.93□□□□□ -1.46
CPS1-205ENST00000467353 ZNF831Q5JPB2 1677 aa5.93□□□□□ -1.46
CPS1-205ENST00000467353 ADAMTS7Q9UKP4 1686 aa5.93□□□□□ -1.46
CPS1-205ENST00000467353 COL5A3P25940 1745 aaPredicted RBP5.93□□□□□ -1.46
CPS1-205ENST00000467353 NRXN2Q9P2S2 1712 aa5.93□□□□□ -1.46
CPS1-205ENST00000467353 SCN4AP35499 1836 aa5.92□□□□□ -1.46
CPS1-205ENST00000467353 NPR1P16066 1061 aa5.92□□□□□ -1.46
CPS1-205ENST00000467353 HIRAP54198 1017 aaPredicted RBP5.92□□□□□ -1.46
CPS1-205ENST00000467353 EIF6P56537 245 aaKnown RBP5.92□□□□□ -1.46
CPS1-205ENST00000467353 HUNKP57058 714 aa5.92□□□□□ -1.46
CPS1-205ENST00000467353 CNBD1Q8NA66 436 aa5.92□□□□□ -1.46
CPS1-205ENST00000467353 JDP2Q8WYK2 163 aa5.92□□□□□ -1.46
CPS1-205ENST00000467353 SETDB2Q96T68 719 aa5.92□□□□□ -1.46
CPS1-205ENST00000467353 POLKQ9UBT6 870 aa5.92□□□□□ -1.46
CPS1-205ENST00000467353 A0A087WZG4 1122 aa5.91□□□□□ -1.46
CPS1-205ENST00000467353 KLRG2A4D1S0 409 aaPredicted RBP5.91□□□□□ -1.46
CPS1-205ENST00000467353 PYGBP11216 843 aa5.91□□□□□ -1.46
CPS1-205ENST00000467353 PKN2Q16513 984 aaKnown RBP5.91□□□□□ -1.46
CPS1-205ENST00000467353 AMOTQ4VCS5 1084 aa5.91□□□□□ -1.46
CPS1-205ENST00000467353 RGMBQ6NW40 437 aa5.91□□□□□ -1.46
CPS1-205ENST00000467353 USP48Q86UV5 1035 aa5.91□□□□□ -1.46
CPS1-205ENST00000467353 LGR6Q9HBX8 967 aa5.91□□□□□ -1.46
CPS1-205ENST00000467353 ADARB2Q9NS39 739 aaKnown RBP5.91□□□□□ -1.46
CPS1-205ENST00000467353 GPRC5DQ9NZD1 345 aa5.91□□□□□ -1.46
CPS1-205ENST00000467353 FER1L6Q2WGJ9 1857 aa5.91□□□□□ -1.46
CPS1-205ENST00000467353 CCDC88AQ3V6T2 1871 aa5.91□□□□□ -1.46
CPS1-205ENST00000467353 DLEC1Q9Y238 1755 aa5.9□□□□□ -1.46
CPS1-205ENST00000467353 POTEFA5A3E0 1075 aa5.9□□□□□ -1.46
CPS1-205ENST00000467353 NPHP1O15259 732 aa5.9□□□□□ -1.46
CPS1-205ENST00000467353 ST5P78524 1137 aa5.9□□□□□ -1.46
CPS1-205ENST00000467353 NEUROD1Q13562 356 aa5.9□□□□□ -1.46
CPS1-205ENST00000467353 C1orf141Q5JVX7 400 aa5.9□□□□□ -1.46
CPS1-205ENST00000467353 CDC37L1Q7L3B6 337 aa5.9□□□□□ -1.46
CPS1-205ENST00000467353 SLC51AQ86UW1 340 aa5.9□□□□□ -1.46
CPS1-205ENST00000467353 AEBP1Q8IUX7 1158 aa5.9□□□□□ -1.46
CPS1-205ENST00000467353 CCDC102AQ96A19 550 aa5.9□□□□□ -1.46
CPS1-205ENST00000467353 PSMD1Q99460 953 aa5.9□□□□□ -1.46
CPS1-205ENST00000467353 COL4A5P29400 1685 aa5.9□□□□□ -1.47
CPS1-205ENST00000467353 AFDNP55196 1824 aaKnown RBP5.9□□□□□ -1.47
CPS1-205ENST00000467353 SLX4Q8IY92 1834 aa5.9□□□□□ -1.47
CPS1-205ENST00000467353 CAMTA2O94983 1202 aa5.89□□□□□ -1.47
CPS1-205ENST00000467353 TBC1D8O95759 1140 aa5.89□□□□□ -1.47
CPS1-205ENST00000467353 GMPSP49915 693 aaPredicted RBP5.89□□□□□ -1.47
CPS1-205ENST00000467353 ZNF157P51786 506 aaPredicted RBP5.89□□□□□ -1.47
CPS1-205ENST00000467353 CXCL9Q07325 125 aa5.89□□□□□ -1.47
CPS1-205ENST00000467353 LARGE2Q8N3Y3 721 aa5.89□□□□□ -1.47
CPS1-205ENST00000467353 ZC3H15Q8WU90 426 aaKnown RBP5.89□□□□□ -1.47
CPS1-205ENST00000467353 ZNF296Q8WUU4 475 aaPredicted RBP5.89□□□□□ -1.47
CPS1-205ENST00000467353 SLC52A2Q9HAB3 445 aa5.89□□□□□ -1.47
CPS1-205ENST00000467353 HDAC9Q9UKV0 1011 aa5.89□□□□□ -1.47
CPS1-205ENST00000467353 ZNF330Q9Y3S2 320 aaPredicted RBP5.89□□□□□ -1.47
CPS1-205ENST00000467353 DICER1Q9UPY3 1922 aaKnown RBP5.89□□□□□ -1.47
CPS1-205ENST00000467353 SHTN1A0MZ66 631 aa5.88□□□□□ -1.47
CPS1-205ENST00000467353 STARD3NLO95772 234 aa5.88□□□□□ -1.47
CPS1-205ENST00000467353 PDAP1Q13442 181 aaKnown RBP5.88□□□□□ -1.47
CPS1-205ENST00000467353 E2F4Q16254 413 aa5.88□□□□□ -1.47
CPS1-205ENST00000467353 FBXO46Q6PJ61 603 aaPredicted RBP5.88□□□□□ -1.47
CPS1-205ENST00000467353 NBPF5PQ86XG9 351 aaPredicted RBP5.88□□□□□ -1.47
CPS1-205ENST00000467353 RASEFQ8IZ41 740 aa5.88□□□□□ -1.47
CPS1-205ENST00000467353 TRPM4Q8TD43 1214 aa5.88□□□□□ -1.47
CPS1-205ENST00000467353 SNED1Q8TER0 1413 aa5.88□□□□□ -1.47
CPS1-205ENST00000467353 SZT2Q5T011 3432 aa5.88□□□□□ -1.47
CPS1-205ENST00000467353 TJP1Q07157 1748 aa5.88□□□□□ -1.47
CPS1-205ENST00000467353 MKI67P46013 3256 aaKnown RBP5.87□□□□□ -1.47
CPS1-205ENST00000467353 H0YGN5 161 aa5.87□□□□□ -1.47
CPS1-205ENST00000467353 A1BGP04217 495 aa5.87□□□□□ -1.47
CPS1-205ENST00000467353 SLC10A3P09131 477 aa5.87□□□□□ -1.47
CPS1-205ENST00000467353 EN2P19622 333 aaPredicted RBP5.87□□□□□ -1.47
CPS1-205ENST00000467353 ALDH1B1P30837 517 aa5.87□□□□□ -1.47
CPS1-205ENST00000467353 TNNT2P45379 298 aaPredicted RBP5.87□□□□□ -1.47
CPS1-205ENST00000467353 C2orf69Q8N8R5 385 aa5.87□□□□□ -1.47
CPS1-205ENST00000467353 OTUD5Q96G74 571 aa5.87□□□□□ -1.47
CPS1-205ENST00000467353 GBA2Q9HCG7 927 aaPredicted RBP5.87□□□□□ -1.47
CPS1-205ENST00000467353 COL11A2P13942 1736 aaPredicted RBP5.87□□□□□ -1.47
CPS1-205ENST00000467353 ANKRD31Q8N7Z5 1873 aa5.87□□□□□ -1.47
CPS1-205ENST00000467353 NPC1L1Q9UHC9 1359 aa5.86□□□□□ -1.47
CPS1-205ENST00000467353 PITPNM2Q9BZ72 1349 aa5.86□□□□□ -1.47
CPS1-205ENST00000467353 FAM177BA6PVY3 158 aa5.86□□□□□ -1.47
CPS1-205ENST00000467353 GPR25O00155 361 aa5.86□□□□□ -1.47
CPS1-205ENST00000467353 TCERG1O14776 1098 aaKnown RBP5.86□□□□□ -1.47
CPS1-205ENST00000467353 RNMTO43148 476 aaKnown RBP5.86□□□□□ -1.47
CPS1-205ENST00000467353 IL6STP40189 918 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms