RNA–Protein interactions for RNA: ENST00000467331.5

APTX-214, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,101 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-214ENST00000467331 FOXD4L6Q3SYB3 417 aaPredicted RBP11.57□□□□□ -0.56
APTX-214ENST00000467331 FOXD4L3Q6VB84 417 aaPredicted RBP11.57□□□□□ -0.56
APTX-214ENST00000467331 FAM200AQ8TCP9 573 aa11.57□□□□□ -0.56
APTX-214ENST00000467331 HMG20BQ9P0W2 317 aa11.57□□□□□ -0.56
APTX-214ENST00000467331 NPHP4O75161 1426 aaPredicted RBP11.57□□□□□ -0.56
APTX-214ENST00000467331 GIGYF1O75420 1035 aaPredicted RBP11.57□□□□□ -0.56
APTX-214ENST00000467331 IFIT2P09913 472 aaKnown RBP11.57□□□□□ -0.56
APTX-214ENST00000467331 CREB3L3Q68CJ9 461 aa11.57□□□□□ -0.56
APTX-214ENST00000467331 PRPF40BQ6NWY9 871 aaKnown RBP11.57□□□□□ -0.56
APTX-214ENST00000467331 KSR2Q6VAB6 950 aa11.57□□□□□ -0.56
APTX-214ENST00000467331 TTC12Q9H892 705 aaPredicted RBP11.57□□□□□ -0.56
APTX-214ENST00000467331 C1QBPQ07021 282 aaKnown RBP11.56□□□□□ -0.56
APTX-214ENST00000467331 OS9Q13438 667 aaPredicted RBP11.56□□□□□ -0.56
APTX-214ENST00000467331 AMOTQ4VCS5 1084 aa11.56□□□□□ -0.56
APTX-214ENST00000467331 DNTTIP2Q5QJE6 756 aaKnown RBP11.56□□□□□ -0.56
APTX-214ENST00000467331 RNF20Q5VTR2 975 aa11.56□□□□□ -0.56
APTX-214ENST00000467331 GIMAP6Q6P9H5 292 aa11.56□□□□□ -0.56
APTX-214ENST00000467331 SCAND2PQ9GZW5 306 aaPredicted RBP11.56□□□□□ -0.56
APTX-214ENST00000467331 DDX19AQ9NUU7 478 aaKnown RBP11.56□□□□□ -0.56
APTX-214ENST00000467331 RBM8AQ9Y5S9 174 aaKnown RBP11.56□□□□□ -0.56
APTX-214ENST00000467331 RGPD2P0DJD1 1756 aa11.56□□□□□ -0.56
APTX-214ENST00000467331 NPHP3Q7Z494 1330 aa11.56□□□□□ -0.56
APTX-214ENST00000467331 SLIT3O75094 1523 aa11.56□□□□□ -0.56
APTX-214ENST00000467331 CAVIN2O95810 425 aa11.56□□□□□ -0.56
APTX-214ENST00000467331 MAP3K11Q16584 847 aa11.56□□□□□ -0.56
APTX-214ENST00000467331 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.56□□□□□ -0.56
APTX-214ENST00000467331 ABTB2Q8N961 1025 aa11.56□□□□□ -0.56
APTX-214ENST00000467331 KIF3AQ9Y496 699 aa11.56□□□□□ -0.56
APTX-214ENST00000467331 SLC27A2O14975 620 aa11.55□□□□□ -0.56
APTX-214ENST00000467331 EIF2S2P20042 333 aaKnown RBP11.55□□□□□ -0.56
APTX-214ENST00000467331 TTC6Q86TZ1 520 aa11.55□□□□□ -0.56
APTX-214ENST00000467331 LINS1Q8NG48 757 aa11.55□□□□□ -0.56
APTX-214ENST00000467331 NUP62CLQ9H1M0 184 aa11.55□□□□□ -0.56
APTX-214ENST00000467331 KCNF1Q9H3M0 494 aa11.55□□□□□ -0.56
APTX-214ENST00000467331 TPCN1Q9ULQ1 816 aa11.55□□□□□ -0.56
APTX-214ENST00000467331 AP5Z1O43299 807 aa11.54□□□□□ -0.56
APTX-214ENST00000467331 CPA1P15085 419 aa11.54□□□□□ -0.56
APTX-214ENST00000467331 TEFQ10587 303 aa11.54□□□□□ -0.56
APTX-214ENST00000467331 PLEKHO1Q53GL0 409 aaPredicted RBP11.54□□□□□ -0.56
APTX-214ENST00000467331 LARP1BQ659C4 914 aaKnown RBP11.54□□□□□ -0.56
APTX-214ENST00000467331 THEMISQ8N1K5 641 aaPredicted RBP11.54□□□□□ -0.56
APTX-214ENST00000467331 ZNF710Q8N1W2 664 aa11.54□□□□□ -0.56
APTX-214ENST00000467331 KCNH5Q8NCM2 988 aa11.54□□□□□ -0.56
APTX-214ENST00000467331 FER1L4A9Z1Z3 1794 aa11.54□□□□□ -0.56
APTX-214ENST00000467331 COL15A1P39059 1388 aa11.54□□□□□ -0.56
APTX-214ENST00000467331 BTBD11A6QL63 1104 aa11.54□□□□□ -0.56
APTX-214ENST00000467331 RPS6KB1P23443 525 aa11.54□□□□□ -0.56
APTX-214ENST00000467331 TYRO3Q06418 890 aa11.54□□□□□ -0.56
APTX-214ENST00000467331 SYCP1Q15431 976 aa11.54□□□□□ -0.56
APTX-214ENST00000467331 NBPF6Q5VWK0 638 aa11.54□□□□□ -0.56
APTX-214ENST00000467331 USPL1Q5W0Q7 1092 aa11.54□□□□□ -0.56
APTX-214ENST00000467331 NBPF4Q96M43 638 aa11.54□□□□□ -0.56
APTX-214ENST00000467331 ZNF830Q96NB3 372 aaPredicted RBP11.54□□□□□ -0.56
APTX-214ENST00000467331 LGR6Q9HBX8 967 aa11.54□□□□□ -0.56
APTX-214ENST00000467331 MAP3K2Q9Y2U5 619 aa11.54□□□□□ -0.56
APTX-214ENST00000467331 MRVI1Q9Y6F6 885 aa11.54□□□□□ -0.56
APTX-214ENST00000467331 MYH15Q9Y2K3 1946 aa11.53□□□□□ -0.56
APTX-214ENST00000467331 VPS37CA5D8V6 355 aaPredicted RBP11.53□□□□□ -0.56
APTX-214ENST00000467331 CTIFO43310 598 aaKnown RBP11.53□□□□□ -0.56
APTX-214ENST00000467331 CHAF1AQ13111 956 aaPredicted RBP11.53□□□□□ -0.56
APTX-214ENST00000467331 NMIQ13287 307 aaPredicted RBP11.53□□□□□ -0.56
APTX-214ENST00000467331 KRT32Q14532 448 aa11.53□□□□□ -0.56
APTX-214ENST00000467331 BLOC1S2Q6QNY1 142 aa11.53□□□□□ -0.56
APTX-214ENST00000467331 AACSQ86V21 672 aa11.53□□□□□ -0.56
APTX-214ENST00000467331 TDRD7Q8NHU6 1098 aaKnown RBP11.53□□□□□ -0.56
APTX-214ENST00000467331 C9orf78Q9NZ63 289 aaPredicted RBP11.53□□□□□ -0.56
APTX-214ENST00000467331 U3KPZ7 1027 aaPredicted RBP11.53□□□□□ -0.56
APTX-214ENST00000467331 GRM8O00222 908 aa11.53□□□□□ -0.56
APTX-214ENST00000467331 RNMTO43148 476 aaKnown RBP11.53□□□□□ -0.56
APTX-214ENST00000467331 SASH1O94885 1247 aa11.53□□□□□ -0.56
APTX-214ENST00000467331 CDC25BP30305 580 aa11.53□□□□□ -0.56
APTX-214ENST00000467331 UTP14CQ5TAP6 766 aaKnown RBP11.53□□□□□ -0.56
APTX-214ENST00000467331 TICAM2Q86XR7 235 aa11.53□□□□□ -0.56
APTX-214ENST00000467331 CLSTN2Q9H4D0 955 aa11.53□□□□□ -0.56
APTX-214ENST00000467331 PRDM4Q9UKN5 801 aa11.53□□□□□ -0.56
APTX-214ENST00000467331 PXDNQ92626 1479 aa11.52□□□□□ -0.56
APTX-214ENST00000467331 ABCC6O95255 1503 aa11.52□□□□□ -0.56
APTX-214ENST00000467331 KCNQ3O43525 872 aa11.52□□□□□ -0.57
APTX-214ENST00000467331 DDX58O95786 925 aaKnown RBP11.52□□□□□ -0.57
APTX-214ENST00000467331 ZNF530Q6P9A1 599 aaPredicted RBP11.52□□□□□ -0.57
APTX-214ENST00000467331 CDC37L1Q7L3B6 337 aa11.52□□□□□ -0.57
APTX-214ENST00000467331 USHBP1Q8N6Y0 703 aa11.52□□□□□ -0.57
APTX-214ENST00000467331 ANKRD7Q92527 254 aa11.52□□□□□ -0.57
APTX-214ENST00000467331 LTV1Q96GA3 475 aaPredicted RBP11.52□□□□□ -0.57
APTX-214ENST00000467331 PHF8Q9UPP1 1060 aa11.52□□□□□ -0.57
APTX-214ENST00000467331 PLEKHG2Q9H7P9 1386 aa11.52□□□□□ -0.57
APTX-214ENST00000467331 G3BP1Q13283 466 aaKnown RBP eCLIP11.51□□□□□ -0.57
APTX-214ENST00000467331 TOB2Q14106 344 aaPredicted RBP11.51□□□□□ -0.57
APTX-214ENST00000467331 PLA2G4DQ86XP0 818 aa11.51□□□□□ -0.57
APTX-214ENST00000467331 EAF2Q96CJ1 260 aaPredicted RBP11.51□□□□□ -0.57
APTX-214ENST00000467331 KAZALD1Q96I82 304 aa11.51□□□□□ -0.57
APTX-214ENST00000467331 LARP6Q9BRS8 491 aaKnown RBP11.51□□□□□ -0.57
APTX-214ENST00000467331 PYCARDQ9ULZ3 195 aa11.51□□□□□ -0.57
APTX-214ENST00000467331 KCNA6P17658 529 aa11.51□□□□□ -0.57
APTX-214ENST00000467331 LIG1P18858 919 aa11.51□□□□□ -0.57
APTX-214ENST00000467331 NECAB1Q8N987 351 aa11.51□□□□□ -0.57
APTX-214ENST00000467331 LEO1Q8WVC0 666 aaPredicted RBP11.51□□□□□ -0.57
APTX-214ENST00000467331 SUCLG2Q96I99 432 aa11.51□□□□□ -0.57
APTX-214ENST00000467331 FAM227BQ96M60 508 aa11.51□□□□□ -0.57
APTX-214ENST00000467331 TNMDQ9H2S6 317 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms