RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 CASZ1Q86V15 1759 aa18.61■□□□□ 0.57
DDX56-208ENST00000467318 ANKRD36CQ5JPF3 1778 aa18.6■□□□□ 0.57
DDX56-208ENST00000467318 CARMIL3Q8ND23 1372 aa18.6■□□□□ 0.57
DDX56-208ENST00000467318 UBN2Q6ZU65 1347 aa18.6■□□□□ 0.57
DDX56-208ENST00000467318 ZBTB7AO95365 584 aa18.6■□□□□ 0.57
DDX56-208ENST00000467318 GCKRQ14397 625 aa18.6■□□□□ 0.57
DDX56-208ENST00000467318 C20orf194Q5TEA3 1177 aa18.6■□□□□ 0.57
DDX56-208ENST00000467318 NYXQ9GZU5 481 aa18.6■□□□□ 0.57
DDX56-208ENST00000467318 ITPRIPQ8IWB1 547 aa18.59■□□□□ 0.57
DDX56-208ENST00000467318 RBM19Q9Y4C8 960 aaKnown RBP18.59■□□□□ 0.57
DDX56-208ENST00000467318 IRX6P78412 446 aaPredicted RBP18.58■□□□□ 0.57
DDX56-208ENST00000467318 MVPQ14764 893 aaKnown RBP18.58■□□□□ 0.57
DDX56-208ENST00000467318 TPTE2Q6XPS3 522 aa18.58■□□□□ 0.57
DDX56-208ENST00000467318 UTP14AQ9BVJ6 771 aaKnown RBP18.58■□□□□ 0.57
DDX56-208ENST00000467318 CHMP4BQ9H444 224 aaKnown RBP18.58■□□□□ 0.57
DDX56-208ENST00000467318 C9orf78Q9NZ63 289 aaPredicted RBP18.58■□□□□ 0.57
DDX56-208ENST00000467318 DDX19BQ9UMR2 479 aa18.58■□□□□ 0.57
DDX56-208ENST00000467318 MMP10P09238 476 aa18.57■□□□□ 0.56
DDX56-208ENST00000467318 SUSD4Q5VX71 490 aa18.57■□□□□ 0.56
DDX56-208ENST00000467318 ZBTB38Q8NAP3 1195 aaPredicted RBP18.57■□□□□ 0.56
DDX56-208ENST00000467318 TRMT112Q9UI30 125 aaKnown RBP18.57■□□□□ 0.56
DDX56-208ENST00000467318 COG6Q9Y2V7 657 aa18.57■□□□□ 0.56
DDX56-208ENST00000467318 PARP3Q9Y6F1 533 aa18.57■□□□□ 0.56
DDX56-208ENST00000467318 N4BP2Q86UW6 1770 aaPredicted RBP18.57■□□□□ 0.56
DDX56-208ENST00000467318 GRM8O00222 908 aa18.57■□□□□ 0.56
DDX56-208ENST00000467318 POLRMTO00411 1230 aaKnown RBP18.57■□□□□ 0.56
DDX56-208ENST00000467318 NBPF5PQ86XG9 351 aaPredicted RBP18.57■□□□□ 0.56
DDX56-208ENST00000467318 SERPINB2P05120 415 aa18.56■□□□□ 0.56
DDX56-208ENST00000467318 PCCAP05165 728 aaPredicted RBP18.56■□□□□ 0.56
DDX56-208ENST00000467318 USP44Q9H0E7 712 aa18.56■□□□□ 0.56
DDX56-208ENST00000467318 HDAC5Q9UQL6 1122 aa18.56■□□□□ 0.56
DDX56-208ENST00000467318 ATF5Q9Y2D1 282 aaPredicted RBP18.56■□□□□ 0.56
DDX56-208ENST00000467318 UTYO14607 1347 aa18.55■□□□□ 0.56
DDX56-208ENST00000467318 H7C1W4 665 aa18.55■□□□□ 0.56
DDX56-208ENST00000467318 NTSR2O95665 410 aa18.55■□□□□ 0.56
DDX56-208ENST00000467318 GNAI3P08754 354 aa18.55■□□□□ 0.56
DDX56-208ENST00000467318 HSP90B1P14625 803 aaKnown RBP18.55■□□□□ 0.56
DDX56-208ENST00000467318 DDR1Q08345 913 aa18.55■□□□□ 0.56
DDX56-208ENST00000467318 AFDNP55196 1824 aaKnown RBP18.55■□□□□ 0.56
DDX56-208ENST00000467318 SH3TC1Q8TE82 1336 aa18.55■□□□□ 0.56
DDX56-208ENST00000467318 ZBTB7BO15156 539 aaPredicted RBP18.54■□□□□ 0.56
DDX56-208ENST00000467318 NPHP1O15259 732 aa18.54■□□□□ 0.56
DDX56-208ENST00000467318 POLD1P28340 1107 aa18.54■□□□□ 0.56
DDX56-208ENST00000467318 GTF2E1P29083 439 aaPredicted RBP18.54■□□□□ 0.56
DDX56-208ENST00000467318 COL24A1Q17RW2 1714 aa18.54■□□□□ 0.56
DDX56-208ENST00000467318 FAM177BA6PVY3 158 aa18.54■□□□□ 0.56
DDX56-208ENST00000467318 CNBD1Q8NA66 436 aa18.54■□□□□ 0.56
DDX56-208ENST00000467318 FAM89AQ96GI7 184 aa18.54■□□□□ 0.56
DDX56-208ENST00000467318 SRCAPQ6ZRS2 3230 aa18.53■□□□□ 0.56
DDX56-208ENST00000467318 UBE3BQ7Z3V4 1068 aa18.53■□□□□ 0.56
DDX56-208ENST00000467318 CDHR2Q9BYE9 1310 aa18.52■□□□□ 0.56
DDX56-208ENST00000467318 NBPF7P0C2Y1 421 aaPredicted RBP18.52■□□□□ 0.56
DDX56-208ENST00000467318 UBTFL1P0CB47 393 aaPredicted RBP18.52■□□□□ 0.56
DDX56-208ENST00000467318 MEIS3Q99687 375 aa18.52■□□□□ 0.56
DDX56-208ENST00000467318 SPON1Q9HCB6 807 aa18.52■□□□□ 0.56
DDX56-208ENST00000467318 CASP7P55210 303 aa18.51■□□□□ 0.55
DDX56-208ENST00000467318 ST5P78524 1137 aa18.51■□□□□ 0.55
DDX56-208ENST00000467318 AAMPQ13685 434 aa18.51■□□□□ 0.55
DDX56-208ENST00000467318 SLC10A5Q5PT55 438 aa18.51■□□□□ 0.55
DDX56-208ENST00000467318 PRR5LQ6MZQ0 368 aa18.51■□□□□ 0.55
DDX56-208ENST00000467318 NUTM1Q86Y26 1132 aa18.51■□□□□ 0.55
DDX56-208ENST00000467318 IRS4O14654 1257 aaPredicted RBP18.5■□□□□ 0.55
DDX56-208ENST00000467318 RTL5Q5HYW3 569 aaPredicted RBP18.5■□□□□ 0.55
DDX56-208ENST00000467318 CRBNQ96SW2 442 aa18.5■□□□□ 0.55
DDX56-208ENST00000467318 SGIP1Q9BQI5 828 aa18.5■□□□□ 0.55
DDX56-208ENST00000467318 ERFEQ4G0M1 354 aa18.5■□□□□ 0.55
DDX56-208ENST00000467318 CCDC24Q8N4L8 307 aa18.5■□□□□ 0.55
DDX56-208ENST00000467318 JARID2Q92833 1246 aaPredicted RBP18.5■□□□□ 0.55
DDX56-208ENST00000467318 PLA2G12BQ9BX93 195 aa18.5■□□□□ 0.55
DDX56-208ENST00000467318 ZBTB40Q9NUA8 1239 aa18.5■□□□□ 0.55
DDX56-208ENST00000467318 NRXN2Q9P2S2 1712 aa18.49■□□□□ 0.55
DDX56-208ENST00000467318 GNAI2P04899 355 aa18.48■□□□□ 0.55
DDX56-208ENST00000467318 PTGER2P43116 358 aa18.48■□□□□ 0.55
DDX56-208ENST00000467318 SYNE4Q8N205 404 aa18.48■□□□□ 0.55
DDX56-208ENST00000467318 PDE8AO60658 829 aa18.47■□□□□ 0.55
DDX56-208ENST00000467318 NLRP3Q96P20 1036 aa18.47■□□□□ 0.55
DDX56-208ENST00000467318 BRIP1Q9BX63 1249 aa18.47■□□□□ 0.55
DDX56-208ENST00000467318 RIC1Q4ADV7 1423 aa18.47■□□□□ 0.55
DDX56-208ENST00000467318 HCLS1P14317 486 aaPredicted RBP18.46■□□□□ 0.55
DDX56-208ENST00000467318 SUCLG2Q96I99 432 aa18.46■□□□□ 0.55
DDX56-208ENST00000467318 EXOC6Q8TAG9 804 aa18.45■□□□□ 0.54
DDX56-208ENST00000467318 KAZALD1Q96I82 304 aa18.45■□□□□ 0.54
DDX56-208ENST00000467318 LRRFIP2Q9Y608 721 aaKnown RBP18.45■□□□□ 0.54
DDX56-208ENST00000467318 ABCC12Q96J65 1359 aa18.45■□□□□ 0.54
DDX56-208ENST00000467318 PDE6BP35913 854 aa18.44■□□□□ 0.54
DDX56-208ENST00000467318 PDZRN3Q9UPQ7 1066 aa18.44■□□□□ 0.54
DDX56-208ENST00000467318 KLRG2A4D1S0 409 aaPredicted RBP18.44■□□□□ 0.54
DDX56-208ENST00000467318 CTSWP56202 376 aa18.44■□□□□ 0.54
DDX56-208ENST00000467318 FOXO4P98177 505 aa18.44■□□□□ 0.54
DDX56-208ENST00000467318 SF3B3Q15393 1217 aaKnown RBP18.44■□□□□ 0.54
DDX56-208ENST00000467318 RABL6Q3YEC7 729 aaPredicted RBP18.44■□□□□ 0.54
DDX56-208ENST00000467318 BICC1Q9H694 974 aaKnown RBP18.44■□□□□ 0.54
DDX56-208ENST00000467318 CSF1RP07333 972 aa18.43■□□□□ 0.54
DDX56-208ENST00000467318 B4GALNT3Q6L9W6 998 aa18.43■□□□□ 0.54
DDX56-208ENST00000467318 TTLL11Q8NHH1 800 aa18.43■□□□□ 0.54
DDX56-208ENST00000467318 ANP32EQ9BTT0 268 aa18.43■□□□□ 0.54
DDX56-208ENST00000467318 CCDC152Q4G0S7 254 aa18.42■□□□□ 0.54
DDX56-208ENST00000467318 C10orf71Q711Q0 1435 aa18.42■□□□□ 0.54
DDX56-208ENST00000467318 DDX60Q8IY21 1712 aaKnown RBP18.41■□□□□ 0.54
DDX56-208ENST00000467318 MTX1Q13505 466 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms