RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 FNBP4Q8N3X1 1017 aaPredicted RBP11.83□□□□□ -0.52
APOBEC1-202ENST00000467171 NBPF15Q8N660 670 aa11.83□□□□□ -0.52
APOBEC1-202ENST00000467171 ATG3Q9NT62 314 aa11.83□□□□□ -0.52
APOBEC1-202ENST00000467171 BCL9O00512 1426 aa11.83□□□□□ -0.52
APOBEC1-202ENST00000467171 SHANK3Q9BYB0 1731 aa11.83□□□□□ -0.52
APOBEC1-202ENST00000467171 PAPPAQ13219 1627 aa11.82□□□□□ -0.52
APOBEC1-202ENST00000467171 COL15A1P39059 1388 aa11.82□□□□□ -0.52
APOBEC1-202ENST00000467171 MYL6BP14649 208 aa11.82□□□□□ -0.52
APOBEC1-202ENST00000467171 AIMP1Q12904 312 aaKnown RBP11.82□□□□□ -0.52
APOBEC1-202ENST00000467171 PPP1R42Q7Z4L9 355 aa11.82□□□□□ -0.52
APOBEC1-202ENST00000467171 PLEKHM2Q8IWE5 1019 aa11.82□□□□□ -0.52
APOBEC1-202ENST00000467171 MS4A4AQ96JQ5 239 aa11.82□□□□□ -0.52
APOBEC1-202ENST00000467171 IPO9Q96P70 1041 aaKnown RBP11.82□□□□□ -0.52
APOBEC1-202ENST00000467171 OSBPL3Q9H4L5 887 aa11.82□□□□□ -0.52
APOBEC1-202ENST00000467171 C9orf78Q9NZ63 289 aaPredicted RBP11.82□□□□□ -0.52
APOBEC1-202ENST00000467171 NRAPQ86VF7 1730 aa11.81□□□□□ -0.52
APOBEC1-202ENST00000467171 NEURL1BA8MQ27 555 aa11.81□□□□□ -0.52
APOBEC1-202ENST00000467171 EIF5BO60841 1220 aaKnown RBP11.81□□□□□ -0.52
APOBEC1-202ENST00000467171 PTCD1O75127 700 aaKnown RBP11.81□□□□□ -0.52
APOBEC1-202ENST00000467171 HSP90AB4PQ58FF6 505 aa11.81□□□□□ -0.52
APOBEC1-202ENST00000467171 BCL11BQ9C0K0 894 aaPredicted RBP11.81□□□□□ -0.52
APOBEC1-202ENST00000467171 NOP58Q9Y2X3 529 aaKnown RBP11.81□□□□□ -0.52
APOBEC1-202ENST00000467171 ECM2O94769 699 aaPredicted RBP11.8□□□□□ -0.52
APOBEC1-202ENST00000467171 STARD3NLO95772 234 aa11.8□□□□□ -0.52
APOBEC1-202ENST00000467171 HOXB3P14651 431 aaPredicted RBP11.8□□□□□ -0.52
APOBEC1-202ENST00000467171 GCKRQ14397 625 aa11.8□□□□□ -0.52
APOBEC1-202ENST00000467171 CWF19L2Q2TBE0 894 aaKnown RBP11.8□□□□□ -0.52
APOBEC1-202ENST00000467171 DDRGK1Q96HY6 314 aa11.8□□□□□ -0.52
APOBEC1-202ENST00000467171 LRRCC1Q9C099 1032 aa11.8□□□□□ -0.52
APOBEC1-202ENST00000467171 ASAP1Q9ULH1 1129 aa11.8□□□□□ -0.52
APOBEC1-202ENST00000467171 VIRMAQ69YN4 1812 aaKnown RBP11.8□□□□□ -0.52
APOBEC1-202ENST00000467171 NWD2Q9ULI1 1742 aa11.8□□□□□ -0.52
APOBEC1-202ENST00000467171 UBR2Q8IWV8 1755 aa11.79□□□□□ -0.52
APOBEC1-202ENST00000467171 C5P01031 1676 aa11.79□□□□□ -0.52
APOBEC1-202ENST00000467171 BCL9LQ86UU0 1499 aa11.79□□□□□ -0.52
APOBEC1-202ENST00000467171 SRGAP3O43295 1099 aa11.79□□□□□ -0.52
APOBEC1-202ENST00000467171 A1BGP04217 495 aa11.79□□□□□ -0.52
APOBEC1-202ENST00000467171 DOK7Q18PE1 504 aa11.79□□□□□ -0.52
APOBEC1-202ENST00000467171 TTC22Q5TAA0 569 aa11.79□□□□□ -0.52
APOBEC1-202ENST00000467171 NGLY1Q96IV0 654 aa11.79□□□□□ -0.52
APOBEC1-202ENST00000467171 MYD88Q99836 296 aa11.79□□□□□ -0.52
APOBEC1-202ENST00000467171 UPF2Q9HAU5 1272 aaKnown RBP11.79□□□□□ -0.52
APOBEC1-202ENST00000467171 SALL3Q9BXA9 1300 aa11.79□□□□□ -0.52
APOBEC1-202ENST00000467171 PRIM1P49642 420 aaKnown RBP11.78□□□□□ -0.52
APOBEC1-202ENST00000467171 TRIM28Q13263 835 aaKnown RBP11.78□□□□□ -0.52
APOBEC1-202ENST00000467171 DNAJC10Q8IXB1 793 aa11.78□□□□□ -0.52
APOBEC1-202ENST00000467171 C16orf71Q8IYS4 520 aaPredicted RBP11.78□□□□□ -0.52
APOBEC1-202ENST00000467171 ZNF710Q8N1W2 664 aa11.78□□□□□ -0.52
APOBEC1-202ENST00000467171 MARCH10Q8NA82 808 aaPredicted RBP11.78□□□□□ -0.52
APOBEC1-202ENST00000467171 KIF1BPQ96EK5 621 aa11.78□□□□□ -0.52
APOBEC1-202ENST00000467171 KAZALD1Q96I82 304 aa11.78□□□□□ -0.52
APOBEC1-202ENST00000467171 SUCLG2Q96I99 432 aa11.78□□□□□ -0.52
APOBEC1-202ENST00000467171 STAP2Q9UGK3 403 aa11.78□□□□□ -0.52
APOBEC1-202ENST00000467171 EXOC6BQ9Y2D4 811 aa11.78□□□□□ -0.52
APOBEC1-202ENST00000467171 STK24Q9Y6E0 443 aa11.78□□□□□ -0.52
APOBEC1-202ENST00000467171 TOGARAM1Q9Y4F4 1720 aa11.77□□□□□ -0.52
APOBEC1-202ENST00000467171 SMARCA5O60264 1052 aaPredicted RBP11.77□□□□□ -0.53
APOBEC1-202ENST00000467171 CYP19A1P11511 503 aaPredicted RBP11.77□□□□□ -0.53
APOBEC1-202ENST00000467171 TTLL7Q6ZT98 887 aa11.77□□□□□ -0.53
APOBEC1-202ENST00000467171 NPM2Q86SE8 214 aaKnown RBP11.77□□□□□ -0.53
APOBEC1-202ENST00000467171 TBC1D32Q96NH3 1257 aa11.77□□□□□ -0.53
APOBEC1-202ENST00000467171 AOX1Q06278 1338 aa11.77□□□□□ -0.53
APOBEC1-202ENST00000467171 LAMB4A4D0S4 1761 aa11.77□□□□□ -0.53
APOBEC1-202ENST00000467171 H7C1W4 665 aa11.76□□□□□ -0.53
APOBEC1-202ENST00000467171 SURF6O75683 361 aaKnown RBP11.76□□□□□ -0.53
APOBEC1-202ENST00000467171 GSPT1P15170 499 aaKnown RBP11.76□□□□□ -0.53
APOBEC1-202ENST00000467171 PIP4K2AP48426 406 aaPredicted RBP11.76□□□□□ -0.53
APOBEC1-202ENST00000467171 PDE1AP54750 535 aa11.76□□□□□ -0.53
APOBEC1-202ENST00000467171 CASP7P55210 303 aa11.76□□□□□ -0.53
APOBEC1-202ENST00000467171 RABL6Q3YEC7 729 aaPredicted RBP11.76□□□□□ -0.53
APOBEC1-202ENST00000467171 ERC1Q8IUD2 1116 aa11.76□□□□□ -0.53
APOBEC1-202ENST00000467171 CCDC191Q8NCU4 936 aa11.76□□□□□ -0.53
APOBEC1-202ENST00000467171 RHPN1Q8TCX5 695 aa11.76□□□□□ -0.53
APOBEC1-202ENST00000467171 C8orf37Q96NL8 207 aa11.76□□□□□ -0.53
APOBEC1-202ENST00000467171 SLC4A9Q96Q91 983 aa11.76□□□□□ -0.53
APOBEC1-202ENST00000467171 HS3ST6Q96QI5 342 aa11.76□□□□□ -0.53
APOBEC1-202ENST00000467171 CCDC9Q9Y3X0 531 aaKnown RBP11.76□□□□□ -0.53
APOBEC1-202ENST00000467171 FAM205CA6NFA0 338 aa11.75□□□□□ -0.53
APOBEC1-202ENST00000467171 RIMBP2O15034 1052 aa11.75□□□□□ -0.53
APOBEC1-202ENST00000467171 CDC45O75419 566 aa11.75□□□□□ -0.53
APOBEC1-202ENST00000467171 HOXB1P14653 301 aaPredicted RBP11.75□□□□□ -0.53
APOBEC1-202ENST00000467171 OTUD7AQ8TE49 926 aaPredicted RBP11.75□□□□□ -0.53
APOBEC1-202ENST00000467171 SMARCC1Q92922 1105 aaPredicted RBP11.75□□□□□ -0.53
APOBEC1-202ENST00000467171 ISCA1Q9BUE6 129 aa11.75□□□□□ -0.53
APOBEC1-202ENST00000467171 BICC1Q9H694 974 aaKnown RBP11.75□□□□□ -0.53
APOBEC1-202ENST00000467171 CWC25Q9NXE8 425 aaPredicted RBP11.75□□□□□ -0.53
APOBEC1-202ENST00000467171 STK25O00506 426 aa11.74□□□□□ -0.53
APOBEC1-202ENST00000467171 MX1P20591 662 aa11.74□□□□□ -0.53
APOBEC1-202ENST00000467171 IL6STP40189 918 aaPredicted RBP11.74□□□□□ -0.53
APOBEC1-202ENST00000467171 TCIRG1Q13488 830 aa11.74□□□□□ -0.53
APOBEC1-202ENST00000467171 TMEM92Q6UXU6 159 aa11.74□□□□□ -0.53
APOBEC1-202ENST00000467171 SYTL4Q96C24 671 aaPredicted RBP11.74□□□□□ -0.53
APOBEC1-202ENST00000467171 USP21Q9UK80 565 aa11.74□□□□□ -0.53
APOBEC1-202ENST00000467171 WNK3Q9BYP7 1800 aa11.74□□□□□ -0.53
APOBEC1-202ENST00000467171 A0A087WZG4 1122 aa11.73□□□□□ -0.53
APOBEC1-202ENST00000467171 ATP5J2-PTCD1G3V325 749 aa11.73□□□□□ -0.53
APOBEC1-202ENST00000467171 APBB1O00213 710 aa11.73□□□□□ -0.53
APOBEC1-202ENST00000467171 FAM98CQ17RN3 349 aaKnown RBP11.73□□□□□ -0.53
APOBEC1-202ENST00000467171 HSP90AB3PQ58FF7 597 aa11.73□□□□□ -0.53
APOBEC1-202ENST00000467171 KIF6Q6ZMV9 814 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 511.6 ms