RNA–Protein interactions for RNA: ENST00000465596.1

THBS3-205, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-205ENST00000465596 SYNE4Q8N205 404 aa9.95□□□□□ -0.82
THBS3-205ENST00000465596 RNF123Q5XPI4 1314 aa9.95□□□□□ -0.82
THBS3-205ENST00000465596 COL4A5P29400 1685 aa9.95□□□□□ -0.82
THBS3-205ENST00000465596 CEP350Q5VT06 3117 aa9.95□□□□□ -0.82
THBS3-205ENST00000465596 TCERG1O14776 1098 aaKnown RBP9.94□□□□□ -0.82
THBS3-205ENST00000465596 IGKV5-2P06315 115 aa9.94□□□□□ -0.82
THBS3-205ENST00000465596 PRELPP51888 382 aa9.94□□□□□ -0.82
THBS3-205ENST00000465596 PARP10Q53GL7 1025 aa9.94□□□□□ -0.82
THBS3-205ENST00000465596 SLC10A5Q5PT55 438 aa9.94□□□□□ -0.82
THBS3-205ENST00000465596 NPM2Q86SE8 214 aaKnown RBP9.94□□□□□ -0.82
THBS3-205ENST00000465596 SLC51AQ86UW1 340 aa9.94□□□□□ -0.82
THBS3-205ENST00000465596 WWC3Q9ULE0 1092 aa9.94□□□□□ -0.82
THBS3-205ENST00000465596 FLIIQ13045 1269 aa9.93□□□□□ -0.82
THBS3-205ENST00000465596 HSP90AB3PQ58FF7 597 aa9.93□□□□□ -0.82
THBS3-205ENST00000465596 TPTE2Q6XPS3 522 aa9.93□□□□□ -0.82
THBS3-205ENST00000465596 C2CD5Q86YS7 1000 aa9.93□□□□□ -0.82
THBS3-205ENST00000465596 C7orf43Q8WVR3 580 aa9.93□□□□□ -0.82
THBS3-205ENST00000465596 METTL22Q9BUU2 404 aaPredicted RBP9.93□□□□□ -0.82
THBS3-205ENST00000465596 PIM2Q9P1W9 311 aa9.93□□□□□ -0.82
THBS3-205ENST00000465596 SCN9AQ15858 1988 aa9.92□□□□□ -0.82
THBS3-205ENST00000465596 ZBED9Q6R2W3 1325 aa9.92□□□□□ -0.82
THBS3-205ENST00000465596 PI4KAP2A4QPH2 592 aa9.92□□□□□ -0.82
THBS3-205ENST00000465596 FAM177BA6PVY3 158 aa9.92□□□□□ -0.82
THBS3-205ENST00000465596 ATP5J2-PTCD1G3V325 749 aa9.92□□□□□ -0.82
THBS3-205ENST00000465596 SLC4A2P04920 1241 aa9.92□□□□□ -0.82
THBS3-205ENST00000465596 HOXA10P31260 410 aaPredicted RBP9.92□□□□□ -0.82
THBS3-205ENST00000465596 PDE6BP35913 854 aa9.92□□□□□ -0.82
THBS3-205ENST00000465596 ST5P78524 1137 aa9.92□□□□□ -0.82
THBS3-205ENST00000465596 GPR162Q16538 588 aa9.92□□□□□ -0.82
THBS3-205ENST00000465596 STYK1Q6J9G0 422 aa9.92□□□□□ -0.82
THBS3-205ENST00000465596 KSR2Q6VAB6 950 aa9.92□□□□□ -0.82
THBS3-205ENST00000465596 PI4KAP1Q8N8J0 262 aa9.92□□□□□ -0.82
THBS3-205ENST00000465596 NYXQ9GZU5 481 aa9.92□□□□□ -0.82
THBS3-205ENST00000465596 PDZRN3Q9UPQ7 1066 aa9.92□□□□□ -0.82
THBS3-205ENST00000465596 NFKBIEO00221 500 aa9.91□□□□□ -0.82
THBS3-205ENST00000465596 GRIN3BO60391 1043 aa9.91□□□□□ -0.82
THBS3-205ENST00000465596 CASP7P55210 303 aa9.91□□□□□ -0.82
THBS3-205ENST00000465596 DALRD3Q5D0E6 543 aaKnown RBP9.91□□□□□ -0.82
THBS3-205ENST00000465596 PRPF40BQ6NWY9 871 aaKnown RBP9.91□□□□□ -0.82
THBS3-205ENST00000465596 MRPL50Q8N5N7 158 aaKnown RBP9.91□□□□□ -0.82
THBS3-205ENST00000465596 UTP14AQ9BVJ6 771 aaKnown RBP9.91□□□□□ -0.82
THBS3-205ENST00000465596 CHMP4AQ9BY43 222 aa9.91□□□□□ -0.82
THBS3-205ENST00000465596 BCS1LQ9Y276 419 aa9.91□□□□□ -0.82
THBS3-205ENST00000465596 MAP3K2Q9Y2U5 619 aa9.91□□□□□ -0.82
THBS3-205ENST00000465596 WDR90Q96KV7 1748 aa9.9□□□□□ -0.82
THBS3-205ENST00000465596 SH3TC1Q8TE82 1336 aa9.9□□□□□ -0.82
THBS3-205ENST00000465596 NEURL1BA8MQ27 555 aa9.9□□□□□ -0.82
THBS3-205ENST00000465596 H0YIN7 160 aa9.9□□□□□ -0.82
THBS3-205ENST00000465596 NPR1P16066 1061 aa9.9□□□□□ -0.82
THBS3-205ENST00000465596 PPP1R42Q7Z4L9 355 aa9.9□□□□□ -0.82
THBS3-205ENST00000465596 TTLL6Q8N841 843 aa9.9□□□□□ -0.82
THBS3-205ENST00000465596 SSH1Q8WYL5 1049 aa9.9□□□□□ -0.82
THBS3-205ENST00000465596 ZNF428Q96B54 188 aa9.9□□□□□ -0.82
THBS3-205ENST00000465596 MASTLQ96GX5 879 aa9.9□□□□□ -0.82
THBS3-205ENST00000465596 MYD88Q99836 296 aa9.9□□□□□ -0.82
THBS3-205ENST00000465596 STK31Q9BXU1 1019 aa9.9□□□□□ -0.82
THBS3-205ENST00000465596 CDHR2Q9BYE9 1310 aa9.89□□□□□ -0.83
THBS3-205ENST00000465596 PCCAP05165 728 aaPredicted RBP9.89□□□□□ -0.83
THBS3-205ENST00000465596 HCLS1P14317 486 aaPredicted RBP9.89□□□□□ -0.83
THBS3-205ENST00000465596 BRPF1P55201 1214 aaPredicted RBP9.89□□□□□ -0.83
THBS3-205ENST00000465596 HNRNPUQ00839 825 aaKnown RBP eCLIP9.89□□□□□ -0.83
THBS3-205ENST00000465596 CWF19L2Q2TBE0 894 aaKnown RBP9.89□□□□□ -0.83
THBS3-205ENST00000465596 OLFM4Q6UX06 510 aa9.89□□□□□ -0.83
THBS3-205ENST00000465596 RIC3Q7Z5B4 369 aa9.89□□□□□ -0.83
THBS3-205ENST00000465596 PELP1Q8IZL8 1130 aaKnown RBP9.89□□□□□ -0.83
THBS3-205ENST00000465596 CCDC191Q8NCU4 936 aa9.89□□□□□ -0.83
THBS3-205ENST00000465596 FAM89AQ96GI7 184 aa9.89□□□□□ -0.83
THBS3-205ENST00000465596 SCN4AP35499 1836 aa9.89□□□□□ -0.83
THBS3-205ENST00000465596 ABCC4O15439 1325 aa9.88□□□□□ -0.83
THBS3-205ENST00000465596 LTBP3Q9NS15 1303 aa9.88□□□□□ -0.83
THBS3-205ENST00000465596 F6X3S4 739 aa9.88□□□□□ -0.83
THBS3-205ENST00000465596 DDX58O95786 925 aaKnown RBP9.88□□□□□ -0.83
THBS3-205ENST00000465596 CT47B1P0C2W7 299 aaPredicted RBP9.88□□□□□ -0.83
THBS3-205ENST00000465596 ALDH1L2Q3SY69 923 aa9.88□□□□□ -0.83
THBS3-205ENST00000465596 BEND3Q5T5X7 828 aa9.88□□□□□ -0.83
THBS3-205ENST00000465596 ZBTB38Q8NAP3 1195 aaPredicted RBP9.88□□□□□ -0.83
THBS3-205ENST00000465596 DNAAF4Q8WXU2 420 aa9.88□□□□□ -0.83
THBS3-205ENST00000465596 CRAMP1Q96RY5 1269 aa9.88□□□□□ -0.83
THBS3-205ENST00000465596 TRMT112Q9UI30 125 aaKnown RBP9.88□□□□□ -0.83
THBS3-205ENST00000465596 ADAMTSL1Q8N6G6 1762 aa9.88□□□□□ -0.83
THBS3-205ENST00000465596 RTL9Q8NET4 1388 aa9.88□□□□□ -0.83
THBS3-205ENST00000465596 PCNTO95613 3336 aa9.87□□□□□ -0.83
THBS3-205ENST00000465596 RARSP54136 660 aaKnown RBP9.87□□□□□ -0.83
THBS3-205ENST00000465596 RASSF7Q02833 373 aa9.87□□□□□ -0.83
THBS3-205ENST00000465596 FKBP5Q13451 457 aaPredicted RBP9.87□□□□□ -0.83
THBS3-205ENST00000465596 GCKRQ14397 625 aa9.87□□□□□ -0.83
THBS3-205ENST00000465596 SF3B3Q15393 1217 aaKnown RBP9.87□□□□□ -0.83
THBS3-205ENST00000465596 LINS1Q8NG48 757 aa9.87□□□□□ -0.83
THBS3-205ENST00000465596 CWC25Q9NXE8 425 aaPredicted RBP9.87□□□□□ -0.83
THBS3-205ENST00000465596 MYH13Q9UKX3 1938 aa9.86□□□□□ -0.83
THBS3-205ENST00000465596 H7C1W4 665 aa9.86□□□□□ -0.83
THBS3-205ENST00000465596 C21orf2O43822 256 aa9.86□□□□□ -0.83
THBS3-205ENST00000465596 ARAP2Q8WZ64 1704 aa9.86□□□□□ -0.83
THBS3-205ENST00000465596 CNKSR1Q969H4 720 aa9.86□□□□□ -0.83
THBS3-205ENST00000465596 ZNF622Q969S3 477 aaKnown RBP eCLIP9.86□□□□□ -0.837e-6■■■■□ 22.7
THBS3-205ENST00000465596 UTYO14607 1347 aa9.85□□□□□ -0.83
THBS3-205ENST00000465596 PTPRCP08575 1304 aa9.85□□□□□ -0.83
THBS3-205ENST00000465596 IRS4O14654 1257 aaPredicted RBP9.85□□□□□ -0.83
THBS3-205ENST00000465596 YY1P25490 414 aa9.85□□□□□ -0.83
THBS3-205ENST00000465596 ZNF784Q8NCA9 323 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms