RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 TGFBR3LH3BV60 316 aa8.61□□□□□ -1.03
USP25-207ENST00000464435 TYRO3Q06418 890 aa8.61□□□□□ -1.03
USP25-207ENST00000464435 BRD7Q9NPI1 651 aa8.61□□□□□ -1.03
USP25-207ENST00000464435 C11orf16Q9NQ32 467 aa8.61□□□□□ -1.03
USP25-207ENST00000464435 STRN4Q9NRL3 753 aa8.61□□□□□ -1.03
USP25-207ENST00000464435 ZMIZ1Q9ULJ6 1067 aa8.61□□□□□ -1.03
USP25-207ENST00000464435 KCNH4Q9UQ05 1017 aa8.61□□□□□ -1.03
USP25-207ENST00000464435 NEURL1BA8MQ27 555 aa8.6□□□□□ -1.03
USP25-207ENST00000464435 SHISA8B8ZZ34 492 aa8.6□□□□□ -1.03
USP25-207ENST00000464435 SIN3BO75182 1162 aa8.6□□□□□ -1.03
USP25-207ENST00000464435 C1orf229Q6ZS94 237 aaPredicted RBP8.6□□□□□ -1.03
USP25-207ENST00000464435 BTLAQ7Z6A9 289 aa8.6□□□□□ -1.03
USP25-207ENST00000464435 ZNF280CQ8ND82 737 aa8.6□□□□□ -1.03
USP25-207ENST00000464435 NGLY1Q96IV0 654 aa8.6□□□□□ -1.03
USP25-207ENST00000464435 HSH2DQ96JZ2 352 aa8.6□□□□□ -1.03
USP25-207ENST00000464435 MKL2Q9ULH7 1088 aa8.6□□□□□ -1.03
USP25-207ENST00000464435 FAM69CQ0P6D2 419 aa8.59□□□□□ -1.03
USP25-207ENST00000464435 SFSWAPQ12872 951 aaKnown RBP8.59□□□□□ -1.03
USP25-207ENST00000464435 ALYREFQ86V81 257 aaKnown RBP8.59□□□□□ -1.03
USP25-207ENST00000464435 COL26A1Q96A83 441 aa8.59□□□□□ -1.03
USP25-207ENST00000464435 BTBD6Q96KE9 485 aa8.59□□□□□ -1.03
USP25-207ENST00000464435 KLF15Q9UIH9 416 aa8.59□□□□□ -1.03
USP25-207ENST00000464435 USTQ9Y2C2 406 aa8.59□□□□□ -1.03
USP25-207ENST00000464435 SPEM2Q0P670 501 aa8.58□□□□□ -1.04
USP25-207ENST00000464435 C11orf91Q3C1V1 193 aa8.58□□□□□ -1.04
USP25-207ENST00000464435 KRTAP4-8Q9BYQ9 185 aa8.58□□□□□ -1.04
USP25-207ENST00000464435 TMEM88BA6NKF7 163 aa8.57□□□□□ -1.04
USP25-207ENST00000464435 ADARB2-AS1A8MUL3 147 aa8.57□□□□□ -1.04
USP25-207ENST00000464435 K7ELQ4 463 aaPredicted RBP8.57□□□□□ -1.04
USP25-207ENST00000464435 EPB42P16452 691 aa8.57□□□□□ -1.04
USP25-207ENST00000464435 ALAS2P22557 587 aa8.57□□□□□ -1.04
USP25-207ENST00000464435 AMPD1P23109 780 aa8.57□□□□□ -1.04
USP25-207ENST00000464435 SYT9Q86SS6 491 aa8.57□□□□□ -1.04
USP25-207ENST00000464435 FCHSD1Q86WN1 690 aa8.57□□□□□ -1.04
USP25-207ENST00000464435 AEBP1Q8IUX7 1158 aa8.57□□□□□ -1.04
USP25-207ENST00000464435 STK32AQ8WU08 396 aa8.57□□□□□ -1.04
USP25-207ENST00000464435 CLP1Q92989 425 aaKnown RBP8.57□□□□□ -1.04
USP25-207ENST00000464435 TNFRSF25Q93038 417 aa8.57□□□□□ -1.04
USP25-207ENST00000464435 DMGDHQ9UI17 866 aaKnown RBP8.57□□□□□ -1.04
USP25-207ENST00000464435 ELOA3CA0A087WX78 387 aaPredicted RBP8.56□□□□□ -1.04
USP25-207ENST00000464435 ELOA3DA6NLF2 546 aaPredicted RBP8.56□□□□□ -1.04
USP25-207ENST00000464435 PCBP4P57723 403 aaKnown RBP8.56□□□□□ -1.04
USP25-207ENST00000464435 OCLNQ16625 522 aa8.56□□□□□ -1.04
USP25-207ENST00000464435 ELOA3BQ3SY89 546 aa8.56□□□□□ -1.04
USP25-207ENST00000464435 ELOA3Q8NG57 546 aa8.56□□□□□ -1.04
USP25-207ENST00000464435 QTRT2Q9H974 415 aaKnown RBP8.56□□□□□ -1.04
USP25-207ENST00000464435 ZBTB7CA1YPR0 619 aa8.55□□□□□ -1.04
USP25-207ENST00000464435 PTCD1O75127 700 aaKnown RBP8.55□□□□□ -1.04
USP25-207ENST00000464435 LGR5O75473 907 aa8.55□□□□□ -1.04
USP25-207ENST00000464435 SNRPNP63162 240 aaKnown RBP8.55□□□□□ -1.04
USP25-207ENST00000464435 TMEM164Q5U3C3 297 aa8.55□□□□□ -1.04
USP25-207ENST00000464435 MDFIQ99750 246 aa8.55□□□□□ -1.04
USP25-207ENST00000464435 RRAGCQ9HB90 399 aa8.55□□□□□ -1.04
USP25-207ENST00000464435 KRBA1A5PL33 1030 aa8.54□□□□□ -1.04
USP25-207ENST00000464435 BAG6P46379 1132 aa8.54□□□□□ -1.04
USP25-207ENST00000464435 FKBP5Q13451 457 aaPredicted RBP8.54□□□□□ -1.04
USP25-207ENST00000464435 CHSY3Q70JA7 882 aa8.54□□□□□ -1.04
USP25-207ENST00000464435 SLC30A3Q99726 388 aa8.54□□□□□ -1.04
USP25-207ENST00000464435 CXXC1Q9P0U4 656 aaPredicted RBP8.54□□□□□ -1.04
USP25-207ENST00000464435 BCS1LQ9Y276 419 aa8.54□□□□□ -1.04
USP25-207ENST00000464435 HOXB4P17483 251 aaPredicted RBP8.53□□□□□ -1.04
USP25-207ENST00000464435 INPP5BP32019 993 aa8.53□□□□□ -1.04
USP25-207ENST00000464435 DGKGP49619 791 aa8.53□□□□□ -1.04
USP25-207ENST00000464435 DGKZQ13574 1117 aa8.53□□□□□ -1.04
USP25-207ENST00000464435 LINC00114Q6XXX2 140 aa8.53□□□□□ -1.04
USP25-207ENST00000464435 PRIMPOLQ96LW4 560 aa8.53□□□□□ -1.04
USP25-207ENST00000464435 GNB5O14775 395 aa8.52□□□□□ -1.05
USP25-207ENST00000464435 PRMT3O60678 531 aa8.52□□□□□ -1.05
USP25-207ENST00000464435 ARSDP51689 593 aa8.52□□□□□ -1.05
USP25-207ENST00000464435 CCINQ13939 588 aa8.52□□□□□ -1.05
USP25-207ENST00000464435 Q8N3U1 123 aa8.52□□□□□ -1.05
USP25-207ENST00000464435 PSMG3-AS1Q96PY0 264 aa8.52□□□□□ -1.05
USP25-207ENST00000464435 NOP53Q9NZM5 478 aaKnown RBP8.52□□□□□ -1.05
USP25-207ENST00000464435 KLK14Q9P0G3 267 aa8.52□□□□□ -1.05
USP25-207ENST00000464435 MICAL2O94851 1124 aa8.51□□□□□ -1.05
USP25-207ENST00000464435 IDH3AP50213 366 aa8.51□□□□□ -1.05
USP25-207ENST00000464435 IFT43Q96FT9 208 aa8.51□□□□□ -1.05
USP25-207ENST00000464435 GSX2Q9BZM3 304 aa8.51□□□□□ -1.05
USP25-207ENST00000464435 FURINP09958 794 aa8.5□□□□□ -1.05
USP25-207ENST00000464435 BRD2P25440 801 aaKnown RBP8.5□□□□□ -1.05
USP25-207ENST00000464435 PDE4CQ08493 712 aa8.5□□□□□ -1.05
USP25-207ENST00000464435 GRIN2CQ14957 1233 aa8.5□□□□□ -1.05
USP25-207ENST00000464435 COX20Q5RI15 118 aa8.5□□□□□ -1.05
USP25-207ENST00000464435 C16orf46Q6P387 395 aa8.5□□□□□ -1.05
USP25-207ENST00000464435 LRFN2Q9ULH4 789 aa8.5□□□□□ -1.05
USP25-207ENST00000464435 COL8A1P27658 744 aa8.49□□□□□ -1.05
USP25-207ENST00000464435 PCSK7Q16549 785 aa8.49□□□□□ -1.05
USP25-207ENST00000464435 PRDM6Q9NQX0 595 aa8.49□□□□□ -1.05
USP25-207ENST00000464435 MAP3K6O95382 1288 aa8.48□□□□□ -1.05
USP25-207ENST00000464435 BRD1O95696 1058 aa8.48□□□□□ -1.05
USP25-207ENST00000464435 ADH7P40394 386 aa8.48□□□□□ -1.05
USP25-207ENST00000464435 BHMTQ93088 406 aa8.48□□□□□ -1.05
USP25-207ENST00000464435 PNMA5Q96PV4 448 aa8.48□□□□□ -1.05
USP25-207ENST00000464435 FAM13BQ9NYF5 915 aa8.48□□□□□ -1.05
USP25-207ENST00000464435 SLAIN2Q9P270 581 aa8.48□□□□□ -1.05
USP25-207ENST00000464435 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.47□□□□□ -1.05
USP25-207ENST00000464435 EGFRP00533 1210 aa8.47□□□□□ -1.05
USP25-207ENST00000464435 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.47□□□□□ -1.05
USP25-207ENST00000464435 SPDYE3A6NKU9 549 aa8.46□□□□□ -1.06
USP25-207ENST00000464435 OPLAHO14841 1288 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms