RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 EP400Q96L91 3159 aa23.52■■□□□ 1.36
CCDC78-206ENST00000463539 PCCAP05165 728 aaPredicted RBP23.52■■□□□ 1.36
CCDC78-206ENST00000463539 ZBTB38Q8NAP3 1195 aaPredicted RBP23.52■■□□□ 1.36
CCDC78-206ENST00000463539 GNPATO15228 680 aa23.51■■□□□ 1.35
CCDC78-206ENST00000463539 RPS6KA4O75676 772 aa23.51■■□□□ 1.35
CCDC78-206ENST00000463539 OS9Q13438 667 aaPredicted RBP23.51■■□□□ 1.35
CCDC78-206ENST00000463539 C8orf34Q49A92 452 aa23.51■■□□□ 1.35
CCDC78-206ENST00000463539 ZNF34Q8IZ26 560 aa23.51■■□□□ 1.35
CCDC78-206ENST00000463539 ZNF652Q9Y2D9 606 aa23.51■■□□□ 1.35
CCDC78-206ENST00000463539 FOXO4P98177 505 aa23.5■■□□□ 1.35
CCDC78-206ENST00000463539 POTEAQ6S8J7 498 aa23.5■■□□□ 1.35
CCDC78-206ENST00000463539 C16orf71Q8IYS4 520 aaPredicted RBP23.5■■□□□ 1.35
CCDC78-206ENST00000463539 LMBR1LQ6UX01 489 aa23.49■■□□□ 1.35
CCDC78-206ENST00000463539 PLEKHM2Q8IWE5 1019 aa23.49■■□□□ 1.35
CCDC78-206ENST00000463539 KIF1BPQ96EK5 621 aa23.49■■□□□ 1.35
CCDC78-206ENST00000463539 PA2G4Q9UQ80 394 aaKnown RBP23.49■■□□□ 1.35
CCDC78-206ENST00000463539 RBM19Q9Y4C8 960 aaKnown RBP23.49■■□□□ 1.35
CCDC78-206ENST00000463539 UBN2Q6ZU65 1347 aa23.49■■□□□ 1.35
CCDC78-206ENST00000463539 SLC27A3Q5K4L6 730 aa23.49■■□□□ 1.35
CCDC78-206ENST00000463539 RHPN1Q8TCX5 695 aa23.49■■□□□ 1.35
CCDC78-206ENST00000463539 FAM89AQ96GI7 184 aa23.49■■□□□ 1.35
CCDC78-206ENST00000463539 RTCBQ9Y3I0 505 aaKnown RBP23.49■■□□□ 1.35
CCDC78-206ENST00000463539 ERC1Q8IUD2 1116 aa23.48■■□□□ 1.35
CCDC78-206ENST00000463539 OTUD7AQ8TE49 926 aaPredicted RBP23.48■■□□□ 1.35
CCDC78-206ENST00000463539 LRRC4BQ9NT99 713 aa23.48■■□□□ 1.35
CCDC78-206ENST00000463539 ANKRD36CQ5JPF3 1778 aa23.48■■□□□ 1.35
CCDC78-206ENST00000463539 TRMT112Q9UI30 125 aaKnown RBP23.47■■□□□ 1.35
CCDC78-206ENST00000463539 CDHR2Q9BYE9 1310 aa23.47■■□□□ 1.35
CCDC78-206ENST00000463539 CLEC4GQ6UXB4 293 aa23.47■■□□□ 1.35
CCDC78-206ENST00000463539 AK7Q96M32 723 aa23.47■■□□□ 1.35
CCDC78-206ENST00000463539 CHMP3Q9Y3E7 222 aa23.47■■□□□ 1.35
CCDC78-206ENST00000463539 G3BP1Q13283 466 aaKnown RBP eCLIP23.46■■□□□ 1.35
CCDC78-206ENST00000463539 PARP10Q53GL7 1025 aa23.46■■□□□ 1.35
CCDC78-206ENST00000463539 BMP2KLQ5H9B9 411 aa23.46■■□□□ 1.35
CCDC78-206ENST00000463539 IL1RAPL2Q9NP60 686 aa23.46■■□□□ 1.35
CCDC78-206ENST00000463539 NUP98P52948 1817 aa23.46■■□□□ 1.35
CCDC78-206ENST00000463539 C4BP0C0L5 1744 aa23.45■■□□□ 1.35
CCDC78-206ENST00000463539 RGL2O15211 777 aa23.45■■□□□ 1.34
CCDC78-206ENST00000463539 RFX5P48382 616 aaPredicted RBP23.45■■□□□ 1.34
CCDC78-206ENST00000463539 PLA2G12BQ9BX93 195 aa23.45■■□□□ 1.34
CCDC78-206ENST00000463539 COPRSQ9NQ92 184 aa23.45■■□□□ 1.34
CCDC78-206ENST00000463539 NIP7Q9Y221 180 aaKnown RBP eCLIP23.45■■□□□ 1.34
CCDC78-206ENST00000463539 KLHDC4Q8TBB5 520 aa23.45■■□□□ 1.34
CCDC78-206ENST00000463539 SIL1Q9H173 461 aa23.44■■□□□ 1.34
CCDC78-206ENST00000463539 NARFQ9UHQ1 456 aa23.44■■□□□ 1.34
CCDC78-206ENST00000463539 PTPN12Q05209 780 aaKnown RBP23.43■■□□□ 1.34
CCDC78-206ENST00000463539 SMIM5Q71RC9 77 aa23.43■■□□□ 1.34
CCDC78-206ENST00000463539 BCORQ6W2J9 1755 aa23.43■■□□□ 1.34
CCDC78-206ENST00000463539 TAF1LQ8IZX4 1826 aa23.43■■□□□ 1.34
CCDC78-206ENST00000463539 IRS4O14654 1257 aaPredicted RBP23.43■■□□□ 1.34
CCDC78-206ENST00000463539 SUSD4Q5VX71 490 aa23.43■■□□□ 1.34
CCDC78-206ENST00000463539 UTP14AQ9BVJ6 771 aaKnown RBP23.43■■□□□ 1.34
CCDC78-206ENST00000463539 SALL3Q9BXA9 1300 aa23.42■■□□□ 1.34
CCDC78-206ENST00000463539 ZPR1O75312 459 aa23.42■■□□□ 1.34
CCDC78-206ENST00000463539 MX1P20591 662 aa23.42■■□□□ 1.34
CCDC78-206ENST00000463539 HMGB2P26583 209 aaKnown RBP23.42■■□□□ 1.34
CCDC78-206ENST00000463539 SYNE4Q8N205 404 aa23.42■■□□□ 1.34
CCDC78-206ENST00000463539 SH3TC1Q8TE82 1336 aa23.42■■□□□ 1.34
CCDC78-206ENST00000463539 PDE1AP54750 535 aa23.41■■□□□ 1.34
CCDC78-206ENST00000463539 TXNRD1Q16881 649 aa23.41■■□□□ 1.34
CCDC78-206ENST00000463539 TTC22Q5TAA0 569 aa23.41■■□□□ 1.34
CCDC78-206ENST00000463539 AMIGO3Q86WK7 504 aa23.41■■□□□ 1.34
CCDC78-206ENST00000463539 OSBPL3Q9H4L5 887 aa23.41■■□□□ 1.34
CCDC78-206ENST00000463539 SCN7AQ01118 1682 aa23.41■■□□□ 1.34
CCDC78-206ENST00000463539 APBA3O96018 575 aa23.4■■□□□ 1.34
CCDC78-206ENST00000463539 TRAPPC3LQ5T215 181 aa23.4■■□□□ 1.34
CCDC78-206ENST00000463539 USPL1Q5W0Q7 1092 aa23.4■■□□□ 1.34
CCDC78-206ENST00000463539 CLASRPQ8N2M8 674 aaKnown RBP23.4■■□□□ 1.34
CCDC78-206ENST00000463539 ARHGEF1Q92888 912 aaKnown RBP23.4■■□□□ 1.34
CCDC78-206ENST00000463539 PHF14O94880 888 aa23.4■■□□□ 1.34
CCDC78-206ENST00000463539 GSPT1P15170 499 aaKnown RBP23.4■■□□□ 1.34
CCDC78-206ENST00000463539 SRP68Q9UHB9 627 aaKnown RBP23.4■■□□□ 1.34
CCDC78-206ENST00000463539 FAM177BA6PVY3 158 aa23.39■■□□□ 1.33
CCDC78-206ENST00000463539 PLSCR1O15162 318 aa23.39■■□□□ 1.33
CCDC78-206ENST00000463539 SASH1O94885 1247 aa23.39■■□□□ 1.33
CCDC78-206ENST00000463539 CSF1RP07333 972 aa23.39■■□□□ 1.33
CCDC78-206ENST00000463539 ADRA2BP18089 450 aa23.39■■□□□ 1.33
CCDC78-206ENST00000463539 RFC4P35249 363 aa23.38■■□□□ 1.33
CCDC78-206ENST00000463539 CTSWP56202 376 aa23.38■■□□□ 1.33
CCDC78-206ENST00000463539 CCDC57Q2TAC2 916 aa23.38■■□□□ 1.33
CCDC78-206ENST00000463539 NUTM1Q86Y26 1132 aa23.38■■□□□ 1.33
CCDC78-206ENST00000463539 BCL2L12Q9HB09 334 aa23.38■■□□□ 1.33
CCDC78-206ENST00000463539 PDE8AO60658 829 aa23.38■■□□□ 1.33
CCDC78-206ENST00000463539 NTSR2O95665 410 aa23.38■■□□□ 1.33
CCDC78-206ENST00000463539 PROM2Q8N271 834 aa23.38■■□□□ 1.33
CCDC78-206ENST00000463539 STAP2Q9UGK3 403 aa23.38■■□□□ 1.33
CCDC78-206ENST00000463539 USP42Q9H9J4 1324 aaKnown RBP23.37■■□□□ 1.33
CCDC78-206ENST00000463539 HSP90B1P14625 803 aaKnown RBP23.36■■□□□ 1.33
CCDC78-206ENST00000463539 TSHZ3Q63HK5 1081 aa23.36■■□□□ 1.33
CCDC78-206ENST00000463539 TTLL11Q8NHH1 800 aa23.36■■□□□ 1.33
CCDC78-206ENST00000463539 CCDC85AQ96PX6 553 aaPredicted RBP23.36■■□□□ 1.33
CCDC78-206ENST00000463539 AOX1Q06278 1338 aa23.36■■□□□ 1.33
CCDC78-206ENST00000463539 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.36■■□□□ 1.33
CCDC78-206ENST00000463539 IFIT5Q13325 482 aaKnown RBP23.36■■□□□ 1.33
CCDC78-206ENST00000463539 TBC1D9BQ66K14 1250 aa23.36■■□□□ 1.33
CCDC78-206ENST00000463539 IFIT2P09913 472 aaKnown RBP23.35■■□□□ 1.33
CCDC78-206ENST00000463539 BICDL1Q6ZP65 573 aa23.35■■□□□ 1.33
CCDC78-206ENST00000463539 AACSQ86V21 672 aa23.35■■□□□ 1.33
CCDC78-206ENST00000463539 HCLS1P14317 486 aaPredicted RBP23.34■■□□□ 1.33
CCDC78-206ENST00000463539 SSFA2P28290 1259 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms