RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 CSB-PGBD3P0DP91 1061 aa10.51□□□□□ -0.73
SHQ1-203ENST00000463369 ZNF16P17020 682 aaPredicted RBP10.51□□□□□ -0.73
SHQ1-203ENST00000463369 LRP6O75581 1613 aa10.51□□□□□ -0.73
SHQ1-203ENST00000463369 EVA1CP58658 441 aa10.5□□□□□ -0.73
SHQ1-203ENST00000463369 NFE2L2Q16236 605 aa10.5□□□□□ -0.73
SHQ1-203ENST00000463369 ATP2B3Q16720 1220 aa10.5□□□□□ -0.73
SHQ1-203ENST00000463369 GPT2Q8TD30 523 aa10.5□□□□□ -0.73
SHQ1-203ENST00000463369 NLRP2Q9NX02 1062 aa10.5□□□□□ -0.73
SHQ1-203ENST00000463369 SLIT2O94813 1529 aa10.5□□□□□ -0.73
SHQ1-203ENST00000463369 SHANK3Q9BYB0 1731 aa10.5□□□□□ -0.73
SHQ1-203ENST00000463369 CRB1P82279 1406 aa10.5□□□□□ -0.73
SHQ1-203ENST00000463369 PEX14O75381 377 aa10.49□□□□□ -0.73
SHQ1-203ENST00000463369 CT47B1P0C2W7 299 aaPredicted RBP10.49□□□□□ -0.73
SHQ1-203ENST00000463369 CHD1LQ86WJ1 897 aa10.49□□□□□ -0.73
SHQ1-203ENST00000463369 SCN11AQ9UI33 1791 aa10.49□□□□□ -0.73
SHQ1-203ENST00000463369 TBC1D12O60347 775 aa10.49□□□□□ -0.73
SHQ1-203ENST00000463369 PRPF40AO75400 957 aaKnown RBP10.49□□□□□ -0.73
SHQ1-203ENST00000463369 TRIM27P14373 513 aa10.49□□□□□ -0.73
SHQ1-203ENST00000463369 TAF3Q5VWG9 929 aa10.49□□□□□ -0.73
SHQ1-203ENST00000463369 TOM1L2Q6ZVM7 507 aa10.49□□□□□ -0.73
SHQ1-203ENST00000463369 JARID2Q92833 1246 aaPredicted RBP10.49□□□□□ -0.73
SHQ1-203ENST00000463369 CARD10Q9BWT7 1032 aa10.49□□□□□ -0.73
SHQ1-203ENST00000463369 LNPKQ9C0E8 428 aa10.49□□□□□ -0.73
SHQ1-203ENST00000463369 STRN4Q9NRL3 753 aa10.49□□□□□ -0.73
SHQ1-203ENST00000463369 TMEM51Q9NW97 253 aa10.49□□□□□ -0.73
SHQ1-203ENST00000463369 PLEKHG2Q9H7P9 1386 aa10.48□□□□□ -0.73
SHQ1-203ENST00000463369 DNTTIP2Q5QJE6 756 aaKnown RBP10.48□□□□□ -0.73
SHQ1-203ENST00000463369 LARP1Q6PKG0 1096 aaKnown RBP10.48□□□□□ -0.73
SHQ1-203ENST00000463369 ITPRIPQ8IWB1 547 aa10.48□□□□□ -0.73
SHQ1-203ENST00000463369 TSC1Q92574 1164 aa10.48□□□□□ -0.73
SHQ1-203ENST00000463369 CALR3Q96L12 384 aaKnown RBP10.48□□□□□ -0.73
SHQ1-203ENST00000463369 SGIP1Q9BQI5 828 aa10.48□□□□□ -0.73
SHQ1-203ENST00000463369 CDCA7Q9BWT1 371 aaPredicted RBP10.48□□□□□ -0.73
SHQ1-203ENST00000463369 ZBTB40Q9NUA8 1239 aa10.48□□□□□ -0.73
SHQ1-203ENST00000463369 TRIM35Q9UPQ4 493 aa10.48□□□□□ -0.73
SHQ1-203ENST00000463369 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.48□□□□□ -0.73
SHQ1-203ENST00000463369 MAP4K4O95819 1239 aaPredicted RBP10.48□□□□□ -0.73
SHQ1-203ENST00000463369 GRIPAP1Q4V328 841 aa10.48□□□□□ -0.73
SHQ1-203ENST00000463369 TBC1D9Q6ZT07 1266 aa10.48□□□□□ -0.73
SHQ1-203ENST00000463369 VTI1AQ96AJ9 217 aa10.48□□□□□ -0.73
SHQ1-203ENST00000463369 PBXIP1Q96AQ6 731 aa10.48□□□□□ -0.73
SHQ1-203ENST00000463369 GPATCH3Q96I76 525 aa10.48□□□□□ -0.73
SHQ1-203ENST00000463369 TMEM63CQ9P1W3 806 aa10.48□□□□□ -0.73
SHQ1-203ENST00000463369 KLHL42Q9P2K6 505 aa10.48□□□□□ -0.73
SHQ1-203ENST00000463369 SYCE3A1L190 88 aa10.47□□□□□ -0.73
SHQ1-203ENST00000463369 PTMAP06454 111 aaKnown RBP10.47□□□□□ -0.73
SHQ1-203ENST00000463369 MTHFSDQ2M296 383 aaKnown RBP10.47□□□□□ -0.73
SHQ1-203ENST00000463369 ATF7IPQ6VMQ6 1270 aa10.47□□□□□ -0.73
SHQ1-203ENST00000463369 FBXO41Q8TF61 875 aa10.47□□□□□ -0.73
SHQ1-203ENST00000463369 EVI5LQ96CN4 794 aa10.47□□□□□ -0.73
SHQ1-203ENST00000463369 NAP1L2Q9ULW6 460 aaPredicted RBP10.47□□□□□ -0.73
SHQ1-203ENST00000463369 KIF3AQ9Y496 699 aa10.47□□□□□ -0.73
SHQ1-203ENST00000463369 KAT6BQ8WYB5 2073 aa10.47□□□□□ -0.73
SHQ1-203ENST00000463369 MEGF6O75095 1541 aa10.46□□□□□ -0.73
SHQ1-203ENST00000463369 PIBF1Q8WXW3 757 aa10.46□□□□□ -0.73
SHQ1-203ENST00000463369 RAPGEF4Q8WZA2 1011 aa10.46□□□□□ -0.73
SHQ1-203ENST00000463369 CCDC102AQ96A19 550 aa10.46□□□□□ -0.73
SHQ1-203ENST00000463369 SMC4Q9NTJ3 1288 aa10.46□□□□□ -0.73
SHQ1-203ENST00000463369 SIPA1L3O60292 1781 aaPredicted RBP10.46□□□□□ -0.73
SHQ1-203ENST00000463369 ADAMTS7Q9UKP4 1686 aa10.46□□□□□ -0.74
SHQ1-203ENST00000463369 BCL9LQ86UU0 1499 aa10.46□□□□□ -0.74
SHQ1-203ENST00000463369 TATP17735 454 aaPredicted RBP10.46□□□□□ -0.74
SHQ1-203ENST00000463369 RFX1P22670 979 aa10.46□□□□□ -0.74
SHQ1-203ENST00000463369 PKP1Q13835 747 aa10.46□□□□□ -0.74
SHQ1-203ENST00000463369 NOLC1Q14978 699 aaKnown RBP eCLIP10.46□□□□□ -0.74
SHQ1-203ENST00000463369 RABEP1Q15276 862 aa10.46□□□□□ -0.74
SHQ1-203ENST00000463369 AMHR2Q16671 573 aa10.46□□□□□ -0.74
SHQ1-203ENST00000463369 AMOTQ4VCS5 1084 aa10.46□□□□□ -0.74
SHQ1-203ENST00000463369 PLEKHO1Q53GL0 409 aaPredicted RBP10.46□□□□□ -0.74
SHQ1-203ENST00000463369 NGLY1Q96IV0 654 aa10.46□□□□□ -0.74
SHQ1-203ENST00000463369 LRRC37A3O60309 1634 aa10.45□□□□□ -0.74
SHQ1-203ENST00000463369 LMOD3Q0VAK6 560 aa10.45□□□□□ -0.74
SHQ1-203ENST00000463369 NOM1Q5C9Z4 860 aaKnown RBP10.45□□□□□ -0.74
SHQ1-203ENST00000463369 RBM46Q8TBY0 533 aaKnown RBP10.45□□□□□ -0.74
SHQ1-203ENST00000463369 OVOS2A0A0G2JMS6 1433 aa10.45□□□□□ -0.74
SHQ1-203ENST00000463369 GPR37O15354 613 aa10.45□□□□□ -0.74
SHQ1-203ENST00000463369 NAALADL2Q58DX5 795 aa10.45□□□□□ -0.74
SHQ1-203ENST00000463369 DNAJC14Q6Y2X3 702 aaPredicted RBP10.45□□□□□ -0.74
SHQ1-203ENST00000463369 DPH6Q7L8W6 267 aa10.45□□□□□ -0.74
SHQ1-203ENST00000463369 UNC5CLQ8IV45 518 aa10.45□□□□□ -0.74
SHQ1-203ENST00000463369 TMEM57Q8N5G2 664 aa10.45□□□□□ -0.74
SHQ1-203ENST00000463369 RNF214Q8ND24 703 aa10.45□□□□□ -0.74
SHQ1-203ENST00000463369 HTATSF1O43719 755 aaKnown RBP10.44□□□□□ -0.74
SHQ1-203ENST00000463369 IL2RBP14784 551 aa10.44□□□□□ -0.74
SHQ1-203ENST00000463369 PDCL2Q8N4E4 241 aa10.44□□□□□ -0.74
SHQ1-203ENST00000463369 SSH1Q8WYL5 1049 aa10.44□□□□□ -0.74
SHQ1-203ENST00000463369 BCL2L12Q9HB09 334 aa10.44□□□□□ -0.74
SHQ1-203ENST00000463369 NOB1Q9ULX3 412 aaKnown RBP10.44□□□□□ -0.74
SHQ1-203ENST00000463369 NSFL1CQ9UNZ2 370 aaKnown RBP10.44□□□□□ -0.74
SHQ1-203ENST00000463369 ZDHHC9Q9Y397 364 aa10.44□□□□□ -0.74
SHQ1-203ENST00000463369 SPATA31A1Q5TZJ5 1347 aa10.44□□□□□ -0.74
SHQ1-203ENST00000463369 POM121CA8CG34 1229 aa10.43□□□□□ -0.74
SHQ1-203ENST00000463369 GNAT3A8MTJ3 354 aa10.43□□□□□ -0.74
SHQ1-203ENST00000463369 MBD3O95983 291 aa10.43□□□□□ -0.74
SHQ1-203ENST00000463369 MEX3CQ5U5Q3 659 aaKnown RBP10.43□□□□□ -0.74
SHQ1-203ENST00000463369 IPO4Q8TEX9 1081 aaKnown RBP10.43□□□□□ -0.74
SHQ1-203ENST00000463369 GLMNQ92990 594 aa10.43□□□□□ -0.74
SHQ1-203ENST00000463369 SPTLC3Q9NUV7 552 aa10.43□□□□□ -0.74
SHQ1-203ENST00000463369 IL16Q14005 1332 aa10.43□□□□□ -0.74
SHQ1-203ENST00000463369 SPATA31A5Q5VU36 1347 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms