RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 CHMP4BQ9H444 224 aaKnown RBP18.09■□□□□ 0.49
COL6A1-202ENST00000463060 CWC25Q9NXE8 425 aaPredicted RBP18.09■□□□□ 0.49
COL6A1-202ENST00000463060 ZNF652Q9Y2D9 606 aa18.09■□□□□ 0.49
COL6A1-202ENST00000463060 GNAI3P08754 354 aa18.08■□□□□ 0.48
COL6A1-202ENST00000463060 TBC1D9BQ66K14 1250 aa18.08■□□□□ 0.48
COL6A1-202ENST00000463060 GTF3C3Q9Y5Q9 886 aa18.08■□□□□ 0.48
COL6A1-202ENST00000463060 AFDNP55196 1824 aaKnown RBP18.07■□□□□ 0.48
COL6A1-202ENST00000463060 GPTP24298 496 aa18.07■□□□□ 0.48
COL6A1-202ENST00000463060 TM4SF1P30408 202 aa18.07■□□□□ 0.48
COL6A1-202ENST00000463060 PARP10Q53GL7 1025 aa18.07■□□□□ 0.48
COL6A1-202ENST00000463060 SUSD4Q5VX71 490 aa18.06■□□□□ 0.48
COL6A1-202ENST00000463060 KAZALD1Q96I82 304 aa18.06■□□□□ 0.48
COL6A1-202ENST00000463060 NIP7Q9Y221 180 aaKnown RBP eCLIP18.06■□□□□ 0.48
COL6A1-202ENST00000463060 PCDHB15Q9Y5E8 787 aa18.06■□□□□ 0.48
COL6A1-202ENST00000463060 PCCAP05165 728 aaPredicted RBP18.05■□□□□ 0.48
COL6A1-202ENST00000463060 C9orf78Q9NZ63 289 aaPredicted RBP18.05■□□□□ 0.48
COL6A1-202ENST00000463060 UBTFL1P0CB47 393 aaPredicted RBP18.04■□□□□ 0.48
COL6A1-202ENST00000463060 NFIXQ14938 502 aa18.04■□□□□ 0.48
COL6A1-202ENST00000463060 ZBTB38Q8NAP3 1195 aaPredicted RBP18.04■□□□□ 0.48
COL6A1-202ENST00000463060 NTSR2O95665 410 aa18.03■□□□□ 0.48
COL6A1-202ENST00000463060 GNAI2P04899 355 aa18.03■□□□□ 0.48
COL6A1-202ENST00000463060 NLGN1Q8N2Q7 840 aa18.03■□□□□ 0.48
COL6A1-202ENST00000463060 PPP4R2Q9NY27 417 aa18.03■□□□□ 0.48
COL6A1-202ENST00000463060 COL24A1Q17RW2 1714 aa18.03■□□□□ 0.48
COL6A1-202ENST00000463060 UBE3BQ7Z3V4 1068 aa18.02■□□□□ 0.48
COL6A1-202ENST00000463060 SIRT2Q8IXJ6 389 aa18.02■□□□□ 0.48
COL6A1-202ENST00000463060 SYNE4Q8N205 404 aa18.02■□□□□ 0.48
COL6A1-202ENST00000463060 JARID2Q92833 1246 aaPredicted RBP18.02■□□□□ 0.48
COL6A1-202ENST00000463060 FAM89AQ96GI7 184 aa18.02■□□□□ 0.48
COL6A1-202ENST00000463060 SUCLG2Q96I99 432 aa18.02■□□□□ 0.48
COL6A1-202ENST00000463060 SETDB2Q96T68 719 aa18.02■□□□□ 0.48
COL6A1-202ENST00000463060 PDGFDQ9GZP0 370 aaPredicted RBP18.02■□□□□ 0.48
COL6A1-202ENST00000463060 LRRFIP2Q9Y608 721 aaKnown RBP18.02■□□□□ 0.48
COL6A1-202ENST00000463060 CDHR2Q9BYE9 1310 aa18.01■□□□□ 0.47
COL6A1-202ENST00000463060 PPP1R42Q7Z4L9 355 aa18.01■□□□□ 0.47
COL6A1-202ENST00000463060 UTP14AQ9BVJ6 771 aaKnown RBP18.01■□□□□ 0.47
COL6A1-202ENST00000463060 PLA2G12BQ9BX93 195 aa18.01■□□□□ 0.47
COL6A1-202ENST00000463060 C1orf115Q9H7X2 142 aa18.01■□□□□ 0.47
COL6A1-202ENST00000463060 TRMT112Q9UI30 125 aaKnown RBP18.01■□□□□ 0.47
COL6A1-202ENST00000463060 HDAC5Q9UQL6 1122 aa18.01■□□□□ 0.47
COL6A1-202ENST00000463060 FOXO4P98177 505 aa18■□□□□ 0.47
COL6A1-202ENST00000463060 MTX1Q13505 466 aa18■□□□□ 0.47
COL6A1-202ENST00000463060 RABL6Q3YEC7 729 aaPredicted RBP18■□□□□ 0.47
COL6A1-202ENST00000463060 EPHA10Q5JZY3 1008 aa18■□□□□ 0.47
COL6A1-202ENST00000463060 SLC10A5Q5PT55 438 aa18■□□□□ 0.47
COL6A1-202ENST00000463060 BICDL1Q6ZP65 573 aa18■□□□□ 0.47
COL6A1-202ENST00000463060 RPAP2Q8IXW5 612 aaPredicted RBP18■□□□□ 0.47
COL6A1-202ENST00000463060 ANKRD44Q8N8A2 993 aa18■□□□□ 0.47
COL6A1-202ENST00000463060 SLC16A10Q8TF71 515 aa18■□□□□ 0.47
COL6A1-202ENST00000463060 POLRMTO00411 1230 aaKnown RBP17.99■□□□□ 0.47
COL6A1-202ENST00000463060 MSH5O43196 834 aa17.99■□□□□ 0.47
COL6A1-202ENST00000463060 ATP8B2P98198 1209 aa17.99■□□□□ 0.47
COL6A1-202ENST00000463060 DDR1Q08345 913 aa17.99■□□□□ 0.47
COL6A1-202ENST00000463060 CEP85Q6P2H3 762 aa17.99■□□□□ 0.47
COL6A1-202ENST00000463060 SH3TC1Q8TE82 1336 aa17.98■□□□□ 0.47
COL6A1-202ENST00000463060 RTL5Q5HYW3 569 aaPredicted RBP17.98■□□□□ 0.47
COL6A1-202ENST00000463060 BICC1Q9H694 974 aaKnown RBP17.98■□□□□ 0.47
COL6A1-202ENST00000463060 CARMIL3Q8ND23 1372 aa17.98■□□□□ 0.47
COL6A1-202ENST00000463060 IRS4O14654 1257 aaPredicted RBP17.97■□□□□ 0.47
COL6A1-202ENST00000463060 IGHDP01880 384 aa17.97■□□□□ 0.47
COL6A1-202ENST00000463060 SERPINB2P05120 415 aa17.97■□□□□ 0.47
COL6A1-202ENST00000463060 CSF1RP07333 972 aa17.97■□□□□ 0.47
COL6A1-202ENST00000463060 HDAC1Q13547 482 aaPredicted RBP17.97■□□□□ 0.47
COL6A1-202ENST00000463060 TPTE2Q6XPS3 522 aa17.97■□□□□ 0.47
COL6A1-202ENST00000463060 NYXQ9GZU5 481 aa17.97■□□□□ 0.47
COL6A1-202ENST00000463060 CASZ1Q86V15 1759 aa17.96■□□□□ 0.47
COL6A1-202ENST00000463060 NRXN2Q9P2S2 1712 aa17.96■□□□□ 0.47
COL6A1-202ENST00000463060 FAM177BA6PVY3 158 aa17.96■□□□□ 0.47
COL6A1-202ENST00000463060 POLA2Q14181 598 aa17.96■□□□□ 0.47
COL6A1-202ENST00000463060 ERFEQ4G0M1 354 aa17.96■□□□□ 0.47
COL6A1-202ENST00000463060 NBPF5PQ86XG9 351 aaPredicted RBP17.96■□□□□ 0.47
COL6A1-202ENST00000463060 NUTM1Q86Y26 1132 aa17.96■□□□□ 0.47
COL6A1-202ENST00000463060 PNMA6EA0A0J9YXQ4 647 aa17.95■□□□□ 0.46
COL6A1-202ENST00000463060 PDE8AO60658 829 aa17.95■□□□□ 0.46
COL6A1-202ENST00000463060 R3HDM1Q15032 1099 aaKnown RBP17.95■□□□□ 0.46
COL6A1-202ENST00000463060 SSH3Q8TE77 659 aa17.95■□□□□ 0.46
COL6A1-202ENST00000463060 DDX60Q8IY21 1712 aaKnown RBP17.95■□□□□ 0.46
COL6A1-202ENST00000463060 MMP10P09238 476 aa17.94■□□□□ 0.46
COL6A1-202ENST00000463060 HCLS1P14317 486 aaPredicted RBP17.94■□□□□ 0.46
COL6A1-202ENST00000463060 PRR5LQ6MZQ0 368 aa17.94■□□□□ 0.46
COL6A1-202ENST00000463060 LMBR1LQ6UX01 489 aa17.94■□□□□ 0.46
COL6A1-202ENST00000463060 TTLL11Q8NHH1 800 aa17.94■□□□□ 0.46
COL6A1-202ENST00000463060 RIC1Q4ADV7 1423 aa17.94■□□□□ 0.46
COL6A1-202ENST00000463060 ABCC12Q96J65 1359 aa17.93■□□□□ 0.46
COL6A1-202ENST00000463060 MSL1Q68DK7 614 aa17.93■□□□□ 0.46
COL6A1-202ENST00000463060 B4GALNT3Q6L9W6 998 aa17.93■□□□□ 0.46
COL6A1-202ENST00000463060 LAMB2P55268 1798 aa17.93■□□□□ 0.46
COL6A1-202ENST00000463060 KDM2BQ8NHM5 1336 aa17.93■□□□□ 0.46
COL6A1-202ENST00000463060 HSP90B1P14625 803 aaKnown RBP17.92■□□□□ 0.46
COL6A1-202ENST00000463060 RFX5P48382 616 aaPredicted RBP17.92■□□□□ 0.46
COL6A1-202ENST00000463060 SF3B3Q15393 1217 aaKnown RBP17.92■□□□□ 0.46
COL6A1-202ENST00000463060 CCDC136Q96JN2 1154 aa17.92■□□□□ 0.46
COL6A1-202ENST00000463060 RWDD1Q9H446 243 aaPredicted RBP17.92■□□□□ 0.46
COL6A1-202ENST00000463060 CTSWP56202 376 aa17.91■□□□□ 0.46
COL6A1-202ENST00000463060 C3orf67Q6ZVT6 689 aa17.91■□□□□ 0.46
COL6A1-202ENST00000463060 CNBD1Q8NA66 436 aa17.91■□□□□ 0.46
COL6A1-202ENST00000463060 DCTPP1Q9H773 170 aa17.91■□□□□ 0.46
COL6A1-202ENST00000463060 MYH3P11055 1940 aa17.9■□□□□ 0.46
COL6A1-202ENST00000463060 KLRG2A4D1S0 409 aaPredicted RBP17.9■□□□□ 0.46
COL6A1-202ENST00000463060 SRGAP3O43295 1099 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms