RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 COL23A1Q86Y22 540 aaPredicted RBP13.38□□□□□ -0.27
RTF1-202ENST00000462276 MEIS3Q99687 375 aa13.38□□□□□ -0.27
RTF1-202ENST00000462276 UTP14AQ9BVJ6 771 aaKnown RBP13.38□□□□□ -0.27
RTF1-202ENST00000462276 BCL2L12Q9HB09 334 aa13.38□□□□□ -0.27
RTF1-202ENST00000462276 GYS1P13807 737 aa13.37□□□□□ -0.27
RTF1-202ENST00000462276 TPTE2Q6XPS3 522 aa13.37□□□□□ -0.27
RTF1-202ENST00000462276 SRP68Q9UHB9 627 aaKnown RBP13.37□□□□□ -0.27
RTF1-202ENST00000462276 PNPLA7Q6ZV29 1317 aa13.37□□□□□ -0.27
RTF1-202ENST00000462276 MYH14Q7Z406 1995 aaKnown RBP13.36□□□□□ -0.27
RTF1-202ENST00000462276 HMMRO75330 724 aa13.36□□□□□ -0.27
RTF1-202ENST00000462276 NBPF7P0C2Y1 421 aaPredicted RBP13.36□□□□□ -0.27
RTF1-202ENST00000462276 GPTP24298 496 aa13.36□□□□□ -0.27
RTF1-202ENST00000462276 PLA2G12BQ9BX93 195 aa13.36□□□□□ -0.27
RTF1-202ENST00000462276 RWDD1Q9H446 243 aaPredicted RBP13.36□□□□□ -0.27
RTF1-202ENST00000462276 ANO8Q9HCE9 1232 aaPredicted RBP13.36□□□□□ -0.27
RTF1-202ENST00000462276 TRMT112Q9UI30 125 aaKnown RBP13.36□□□□□ -0.27
RTF1-202ENST00000462276 SH3TC1Q8TE82 1336 aa13.36□□□□□ -0.27
RTF1-202ENST00000462276 CDHR2Q9BYE9 1310 aa13.36□□□□□ -0.27
RTF1-202ENST00000462276 TM4SF1P30408 202 aa13.35□□□□□ -0.27
RTF1-202ENST00000462276 CASP7P55210 303 aa13.35□□□□□ -0.27
RTF1-202ENST00000462276 MTX1Q13505 466 aa13.35□□□□□ -0.27
RTF1-202ENST00000462276 HDAC1Q13547 482 aaPredicted RBP13.35□□□□□ -0.27
RTF1-202ENST00000462276 TBC1D9BQ66K14 1250 aa13.35□□□□□ -0.27
RTF1-202ENST00000462276 UBE3BQ7Z3V4 1068 aa13.35□□□□□ -0.27
RTF1-202ENST00000462276 NFIXQ14938 502 aa13.34□□□□□ -0.27
RTF1-202ENST00000462276 SLC10A5Q5PT55 438 aa13.34□□□□□ -0.27
RTF1-202ENST00000462276 SUSD4Q5VX71 490 aa13.34□□□□□ -0.27
RTF1-202ENST00000462276 ANKRD44Q8N8A2 993 aa13.34□□□□□ -0.27
RTF1-202ENST00000462276 CCDC136Q96JN2 1154 aa13.34□□□□□ -0.27
RTF1-202ENST00000462276 UBN2Q6ZU65 1347 aa13.34□□□□□ -0.27
RTF1-202ENST00000462276 CARMIL3Q8ND23 1372 aa13.33□□□□□ -0.27
RTF1-202ENST00000462276 GTF2E1P29083 439 aaPredicted RBP13.33□□□□□ -0.28
RTF1-202ENST00000462276 ATP8B2P98198 1209 aa13.33□□□□□ -0.28
RTF1-202ENST00000462276 RABL6Q3YEC7 729 aaPredicted RBP13.33□□□□□ -0.28
RTF1-202ENST00000462276 SMIM5Q71RC9 77 aa13.33□□□□□ -0.28
RTF1-202ENST00000462276 NBPF5PQ86XG9 351 aaPredicted RBP13.33□□□□□ -0.28
RTF1-202ENST00000462276 PCDHB15Q9Y5E8 787 aa13.33□□□□□ -0.28
RTF1-202ENST00000462276 LRRFIP2Q9Y608 721 aaKnown RBP13.33□□□□□ -0.28
RTF1-202ENST00000462276 TAF1LQ8IZX4 1826 aa13.33□□□□□ -0.28
RTF1-202ENST00000462276 IRS4O14654 1257 aaPredicted RBP13.32□□□□□ -0.28
RTF1-202ENST00000462276 PDE8AO60658 829 aa13.32□□□□□ -0.28
RTF1-202ENST00000462276 NTSR2O95665 410 aa13.32□□□□□ -0.28
RTF1-202ENST00000462276 CEP85Q6P2H3 762 aa13.32□□□□□ -0.28
RTF1-202ENST00000462276 FAM89AQ96GI7 184 aa13.32□□□□□ -0.28
RTF1-202ENST00000462276 BICDL1Q6ZP65 573 aa13.31□□□□□ -0.28
RTF1-202ENST00000462276 SUCLG2Q96I99 432 aa13.31□□□□□ -0.28
RTF1-202ENST00000462276 NPHP1O15259 732 aa13.3□□□□□ -0.28
RTF1-202ENST00000462276 SERPINB2P05120 415 aa13.3□□□□□ -0.28
RTF1-202ENST00000462276 CSF1RP07333 972 aa13.3□□□□□ -0.28
RTF1-202ENST00000462276 HSP90AB4PQ58FF6 505 aa13.3□□□□□ -0.28
RTF1-202ENST00000462276 CENPQQ7L2Z9 268 aaPredicted RBP13.3□□□□□ -0.28
RTF1-202ENST00000462276 CNBD1Q8NA66 436 aa13.3□□□□□ -0.28
RTF1-202ENST00000462276 SSH3Q8TE77 659 aa13.3□□□□□ -0.28
RTF1-202ENST00000462276 KAZALD1Q96I82 304 aa13.3□□□□□ -0.28
RTF1-202ENST00000462276 BICC1Q9H694 974 aaKnown RBP13.3□□□□□ -0.28
RTF1-202ENST00000462276 PARP3Q9Y6F1 533 aa13.3□□□□□ -0.28
RTF1-202ENST00000462276 POLRMTO00411 1230 aaKnown RBP13.29□□□□□ -0.28
RTF1-202ENST00000462276 SRGAP3O43295 1099 aa13.29□□□□□ -0.28
RTF1-202ENST00000462276 ST5P78524 1137 aa13.29□□□□□ -0.28
RTF1-202ENST00000462276 FOXO4P98177 505 aa13.29□□□□□ -0.28
RTF1-202ENST00000462276 GCC1Q96CN9 775 aa13.29□□□□□ -0.28
RTF1-202ENST00000462276 NLRP3Q96P20 1036 aa13.29□□□□□ -0.28
RTF1-202ENST00000462276 C1orf115Q9H7X2 142 aa13.29□□□□□ -0.28
RTF1-202ENST00000462276 FBXO3Q9UK99 471 aa13.29□□□□□ -0.28
RTF1-202ENST00000462276 PDZRN3Q9UPQ7 1066 aa13.29□□□□□ -0.28
RTF1-202ENST00000462276 UBR3Q6ZT12 1888 aa13.28□□□□□ -0.28
RTF1-202ENST00000462276 MMP10P09238 476 aa13.28□□□□□ -0.28
RTF1-202ENST00000462276 CTSWP56202 376 aa13.28□□□□□ -0.28
RTF1-202ENST00000462276 POLA2Q14181 598 aa13.28□□□□□ -0.28
RTF1-202ENST00000462276 SF3B3Q15393 1217 aaKnown RBP13.28□□□□□ -0.28
RTF1-202ENST00000462276 CCDC152Q4G0S7 254 aa13.28□□□□□ -0.28
RTF1-202ENST00000462276 LMBR1LQ6UX01 489 aa13.28□□□□□ -0.28
RTF1-202ENST00000462276 SIRT2Q8IXJ6 389 aa13.28□□□□□ -0.28
RTF1-202ENST00000462276 MTFR1LQ9H019 292 aa13.28□□□□□ -0.28
RTF1-202ENST00000462276 DCTPP1Q9H773 170 aa13.28□□□□□ -0.28
RTF1-202ENST00000462276 FAM177BA6PVY3 158 aa13.27□□□□□ -0.29
RTF1-202ENST00000462276 DDR1Q08345 913 aa13.27□□□□□ -0.29
RTF1-202ENST00000462276 CCDC57Q2TAC2 916 aa13.27□□□□□ -0.29
RTF1-202ENST00000462276 ERFEQ4G0M1 354 aa13.27□□□□□ -0.29
RTF1-202ENST00000462276 RTL5Q5HYW3 569 aaPredicted RBP13.27□□□□□ -0.29
RTF1-202ENST00000462276 TTLL11Q8NHH1 800 aa13.27□□□□□ -0.29
RTF1-202ENST00000462276 BRIP1Q9BX63 1249 aa13.27□□□□□ -0.29
RTF1-202ENST00000462276 NOP58Q9Y2X3 529 aaKnown RBP13.27□□□□□ -0.29
RTF1-202ENST00000462276 RTL9Q8NET4 1388 aa13.27□□□□□ -0.29
RTF1-202ENST00000462276 RIC1Q4ADV7 1423 aa13.27□□□□□ -0.29
RTF1-202ENST00000462276 LRP5O75197 1615 aa13.27□□□□□ -0.29
RTF1-202ENST00000462276 NUP188Q5SRE5 1749 aa13.27□□□□□ -0.29
RTF1-202ENST00000462276 ARFGEF2Q9Y6D5 1785 aa13.27□□□□□ -0.29
RTF1-202ENST00000462276 RAB11FIP3O75154 756 aa13.26□□□□□ -0.29
RTF1-202ENST00000462276 HCLS1P14317 486 aaPredicted RBP13.26□□□□□ -0.29
RTF1-202ENST00000462276 IFIT5Q13325 482 aaKnown RBP13.26□□□□□ -0.29
RTF1-202ENST00000462276 EPHA10Q5JZY3 1008 aa13.26□□□□□ -0.29
RTF1-202ENST00000462276 B4GALNT3Q6L9W6 998 aa13.26□□□□□ -0.29
RTF1-202ENST00000462276 PRR5LQ6MZQ0 368 aa13.26□□□□□ -0.29
RTF1-202ENST00000462276 NUTM1Q86Y26 1132 aa13.26□□□□□ -0.29
RTF1-202ENST00000462276 SMC5Q8IY18 1101 aa13.26□□□□□ -0.29
RTF1-202ENST00000462276 JARID2Q92833 1246 aaPredicted RBP13.26□□□□□ -0.29
RTF1-202ENST00000462276 COPRSQ9NQ92 184 aa13.26□□□□□ -0.29
RTF1-202ENST00000462276 SCN7AQ01118 1682 aa13.25□□□□□ -0.29
RTF1-202ENST00000462276 PNMA6EA0A0J9YXQ4 647 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms