RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 HHIPL1Q96JK4 782 aa17.16■□□□□ 0.34
C9orf78-202ENST00000461349 TIMELESSQ9UNS1 1208 aa17.16■□□□□ 0.34
C9orf78-202ENST00000461349 NUP98P52948 1817 aa17.15■□□□□ 0.34
C9orf78-202ENST00000461349 CELF2O95319 508 aaKnown RBP17.15■□□□□ 0.34
C9orf78-202ENST00000461349 EIF4G2P78344 907 aaKnown RBP eCLIP17.15■□□□□ 0.34
C9orf78-202ENST00000461349 USP16Q9Y5T5 823 aa17.15■□□□□ 0.34
C9orf78-202ENST00000461349 NIM1KQ8IY84 436 aa17.14■□□□□ 0.33
C9orf78-202ENST00000461349 ADARB2Q9NS39 739 aaKnown RBP17.14■□□□□ 0.33
C9orf78-202ENST00000461349 AKAP11Q9UKA4 1901 aa17.13■□□□□ 0.33
C9orf78-202ENST00000461349 CIAPIN1Q6FI81 312 aa17.13■□□□□ 0.33
C9orf78-202ENST00000461349 RPGRQ92834 1020 aaKnown RBP17.13■□□□□ 0.33
C9orf78-202ENST00000461349 NYXQ9GZU5 481 aa17.13■□□□□ 0.33
C9orf78-202ENST00000461349 CEMIPQ8WUJ3 1361 aa17.13■□□□□ 0.33
C9orf78-202ENST00000461349 KCNQ3O43525 872 aa17.12■□□□□ 0.33
C9orf78-202ENST00000461349 SNRPA1P09661 255 aaKnown RBP17.12■□□□□ 0.33
C9orf78-202ENST00000461349 CRY2Q49AN0 593 aa17.12■□□□□ 0.33
C9orf78-202ENST00000461349 ZNF408Q9H9D4 720 aa17.12■□□□□ 0.33
C9orf78-202ENST00000461349 LAMB4A4D0S4 1761 aa17.12■□□□□ 0.33
C9orf78-202ENST00000461349 U2SURPO15042 1029 aaKnown RBP17.11■□□□□ 0.33
C9orf78-202ENST00000461349 HSPA5P11021 654 aaKnown RBP17.11■□□□□ 0.33
C9orf78-202ENST00000461349 NOGQ13253 232 aa17.11■□□□□ 0.33
C9orf78-202ENST00000461349 AMER1Q5JTC6 1135 aaPredicted RBP17.11■□□□□ 0.33
C9orf78-202ENST00000461349 TMX4Q9H1E5 349 aaPredicted RBP17.11■□□□□ 0.33
C9orf78-202ENST00000461349 GPRC5DQ9NZD1 345 aa17.11■□□□□ 0.33
C9orf78-202ENST00000461349 GLIS2Q9BZE0 524 aaPredicted RBP17.1■□□□□ 0.33
C9orf78-202ENST00000461349 PRAMEF22A3QJZ6 481 aa17.09■□□□□ 0.33
C9orf78-202ENST00000461349 PPIP5K2O43314 1243 aa17.09■□□□□ 0.33
C9orf78-202ENST00000461349 SOX10P56693 466 aa17.09■□□□□ 0.33
C9orf78-202ENST00000461349 ABCC12Q96J65 1359 aa17.09■□□□□ 0.33
C9orf78-202ENST00000461349 PPEF1O14829 653 aaPredicted RBP17.08■□□□□ 0.32
C9orf78-202ENST00000461349 HOXA10P31260 410 aaPredicted RBP17.08■□□□□ 0.32
C9orf78-202ENST00000461349 HLFQ16534 295 aa17.08■□□□□ 0.32
C9orf78-202ENST00000461349 PRPF38BQ5VTL8 546 aaKnown RBP17.08■□□□□ 0.32
C9orf78-202ENST00000461349 NUTM1Q86Y26 1132 aa17.08■□□□□ 0.32
C9orf78-202ENST00000461349 RBM17Q96I25 401 aaKnown RBP17.08■□□□□ 0.32
C9orf78-202ENST00000461349 RIC1Q4ADV7 1423 aa17.07■□□□□ 0.32
C9orf78-202ENST00000461349 NPC1L1Q9UHC9 1359 aa17.07■□□□□ 0.32
C9orf78-202ENST00000461349 KIF7Q2M1P5 1343 aa17.07■□□□□ 0.32
C9orf78-202ENST00000461349 TCERG1O14776 1098 aaKnown RBP17.07■□□□□ 0.32
C9orf78-202ENST00000461349 CDC37L1Q7L3B6 337 aa17.07■□□□□ 0.32
C9orf78-202ENST00000461349 VPS33BQ9H267 617 aa17.07■□□□□ 0.32
C9orf78-202ENST00000461349 CDHR2Q9BYE9 1310 aa17.06■□□□□ 0.32
C9orf78-202ENST00000461349 NBPF26B4DH59 902 aa17.06■□□□□ 0.32
C9orf78-202ENST00000461349 AOC3Q16853 763 aa17.06■□□□□ 0.32
C9orf78-202ENST00000461349 NBPF10Q6P3W6 841 aaKnown RBP17.06■□□□□ 0.32
C9orf78-202ENST00000461349 NBPF15Q8N660 670 aa17.06■□□□□ 0.32
C9orf78-202ENST00000461349 ZC3H15Q8WU90 426 aaKnown RBP17.06■□□□□ 0.32
C9orf78-202ENST00000461349 CRAMP1Q96RY5 1269 aa17.06■□□□□ 0.32
C9orf78-202ENST00000461349 ZNRF3Q9ULT6 936 aa17.06■□□□□ 0.32
C9orf78-202ENST00000461349 COL3A1P02461 1466 aaPredicted RBP17.05■□□□□ 0.32
C9orf78-202ENST00000461349 GMPSP49915 693 aaPredicted RBP17.05■□□□□ 0.32
C9orf78-202ENST00000461349 HUNKP57058 714 aa17.05■□□□□ 0.32
C9orf78-202ENST00000461349 SUPT20HQ8NEM7 779 aa17.05■□□□□ 0.32
C9orf78-202ENST00000461349 RTF1Q92541 710 aaKnown RBP17.05■□□□□ 0.32
C9orf78-202ENST00000461349 BCL2L13Q9BXK5 485 aa17.05■□□□□ 0.32
C9orf78-202ENST00000461349 SAGE1Q9NXZ1 904 aa17.05■□□□□ 0.32
C9orf78-202ENST00000461349 PGAP2Q9UHJ9 254 aa17.05■□□□□ 0.32
C9orf78-202ENST00000461349 POLR2AP24928 1970 aaKnown RBP17.04■□□□□ 0.32
C9orf78-202ENST00000461349 CXCL9Q07325 125 aa17.04■□□□□ 0.32
C9orf78-202ENST00000461349 IBTKQ9P2D0 1353 aaPredicted RBP17.03■□□□□ 0.32
C9orf78-202ENST00000461349 CC2D1BQ5T0F9 858 aaKnown RBP17.03■□□□□ 0.32
C9orf78-202ENST00000461349 ERVV-1B6SEH8 477 aa17.02■□□□□ 0.32
C9orf78-202ENST00000461349 TNIP1Q15025 636 aa17.02■□□□□ 0.32
C9orf78-202ENST00000461349 KIF6Q6ZMV9 814 aa17.02■□□□□ 0.32
C9orf78-202ENST00000461349 NGEFQ8N5V2 710 aa17.02■□□□□ 0.32
C9orf78-202ENST00000461349 ZIC5Q96T25 663 aa17.02■□□□□ 0.32
C9orf78-202ENST00000461349 PRKAR2BP31323 418 aa17.01■□□□□ 0.31
C9orf78-202ENST00000461349 RGMBQ6NW40 437 aa17.01■□□□□ 0.31
C9orf78-202ENST00000461349 PHACTR3Q96KR7 559 aa17.01■□□□□ 0.31
C9orf78-202ENST00000461349 MAP3K15Q6ZN16 1313 aa17■□□□□ 0.31
C9orf78-202ENST00000461349 LAMB2P55268 1798 aa17■□□□□ 0.31
C9orf78-202ENST00000461349 H7C1D1 291 aa17■□□□□ 0.31
C9orf78-202ENST00000461349 GPTP24298 496 aa17■□□□□ 0.31
C9orf78-202ENST00000461349 MCM10Q7L590 875 aa17■□□□□ 0.31
C9orf78-202ENST00000461349 CCDC102AQ96A19 550 aa17■□□□□ 0.31
C9orf78-202ENST00000461349 ATP6V0A2Q9Y487 856 aa17■□□□□ 0.31
C9orf78-202ENST00000461349 TRPA1O75762 1119 aa16.99■□□□□ 0.31
C9orf78-202ENST00000461349 HIRAP54198 1017 aaPredicted RBP16.99■□□□□ 0.31
C9orf78-202ENST00000461349 DPP8Q6V1X1 898 aaPredicted RBP16.99■□□□□ 0.31
C9orf78-202ENST00000461349 USP48Q86UV5 1035 aa16.99■□□□□ 0.31
C9orf78-202ENST00000461349 SLC51AQ86UW1 340 aa16.99■□□□□ 0.31
C9orf78-202ENST00000461349 C2orf69Q8N8R5 385 aa16.99■□□□□ 0.31
C9orf78-202ENST00000461349 TRPM4Q8TD43 1214 aa16.99■□□□□ 0.31
C9orf78-202ENST00000461349 NLRP3Q96P20 1036 aa16.99■□□□□ 0.31
C9orf78-202ENST00000461349 ANKRD36CQ5JPF3 1778 aa16.99■□□□□ 0.31
C9orf78-202ENST00000461349 RAD17O75943 681 aa16.98■□□□□ 0.31
C9orf78-202ENST00000461349 KIF23Q02241 960 aaPredicted RBP16.98■□□□□ 0.31
C9orf78-202ENST00000461349 CTU1Q7Z7A3 348 aaKnown RBP16.98■□□□□ 0.31
C9orf78-202ENST00000461349 RTFDC1Q9BY42 306 aaPredicted RBP16.98■□□□□ 0.31
C9orf78-202ENST00000461349 RNF186Q9NXI6 227 aa16.98■□□□□ 0.31
C9orf78-202ENST00000461349 CNOT7Q9UIV1 285 aaKnown RBP16.98■□□□□ 0.31
C9orf78-202ENST00000461349 UBN2Q6ZU65 1347 aa16.97■□□□□ 0.31
C9orf78-202ENST00000461349 KDM3BQ7LBC6 1761 aa16.97■□□□□ 0.31
C9orf78-202ENST00000461349 FAM155AB1AL88 458 aaPredicted RBP16.97■□□□□ 0.31
C9orf78-202ENST00000461349 ZNF157P51786 506 aaPredicted RBP16.97■□□□□ 0.31
C9orf78-202ENST00000461349 SUSD4Q5VX71 490 aa16.97■□□□□ 0.31
C9orf78-202ENST00000461349 PPP1R42Q7Z4L9 355 aa16.97■□□□□ 0.31
C9orf78-202ENST00000461349 GBA2Q9HCG7 927 aaPredicted RBP16.97■□□□□ 0.31
C9orf78-202ENST00000461349 KIAA2012Q0VF49 1180 aa16.96■□□□□ 0.31
C9orf78-202ENST00000461349 MICALL2Q8IY33 904 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms