RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 BECN1Q14457 450 aa13.38□□□□□ -0.27
IFT88-204ENST00000461115 ERICH6Q7L0X2 663 aa13.38□□□□□ -0.27
IFT88-204ENST00000461115 MYD88Q99836 296 aa13.38□□□□□ -0.27
IFT88-204ENST00000461115 TTC41PQ6P2S7 1318 aa13.37□□□□□ -0.27
IFT88-204ENST00000461115 SNX21Q969T3 373 aa13.37□□□□□ -0.27
IFT88-204ENST00000461115 KIF2CQ99661 725 aa13.37□□□□□ -0.27
IFT88-204ENST00000461115 BICC1Q9H694 974 aaKnown RBP13.37□□□□□ -0.27
IFT88-204ENST00000461115 COPRSQ9NQ92 184 aa13.37□□□□□ -0.27
IFT88-204ENST00000461115 USP35Q9P2H5 1018 aa13.37□□□□□ -0.27
IFT88-204ENST00000461115 ASAP1Q9ULH1 1129 aa13.37□□□□□ -0.27
IFT88-204ENST00000461115 BCL9LQ86UU0 1499 aa13.36□□□□□ -0.27
IFT88-204ENST00000461115 MAP3K13O43283 966 aa13.36□□□□□ -0.27
IFT88-204ENST00000461115 A1BGP04217 495 aa13.36□□□□□ -0.27
IFT88-204ENST00000461115 RFX5P48382 616 aaPredicted RBP13.36□□□□□ -0.27
IFT88-204ENST00000461115 CCDC191Q8NCU4 936 aa13.36□□□□□ -0.27
IFT88-204ENST00000461115 PI4K2BQ8TCG2 481 aa13.36□□□□□ -0.27
IFT88-204ENST00000461115 IL17RAQ96F46 866 aa13.36□□□□□ -0.27
IFT88-204ENST00000461115 ISCA1Q9BUE6 129 aa13.36□□□□□ -0.27
IFT88-204ENST00000461115 NUP98P52948 1817 aa13.35□□□□□ -0.27
IFT88-204ENST00000461115 APBB1O00213 710 aa13.35□□□□□ -0.27
IFT88-204ENST00000461115 PTCD1O75127 700 aaKnown RBP13.35□□□□□ -0.27
IFT88-204ENST00000461115 TTLL7Q6ZT98 887 aa13.35□□□□□ -0.27
IFT88-204ENST00000461115 FNBP4Q8N3X1 1017 aaPredicted RBP13.35□□□□□ -0.27
IFT88-204ENST00000461115 STARD3NLO95772 234 aa13.34□□□□□ -0.27
IFT88-204ENST00000461115 DDB1Q16531 1140 aa13.34□□□□□ -0.27
IFT88-204ENST00000461115 EPHA10Q5JZY3 1008 aa13.34□□□□□ -0.27
IFT88-204ENST00000461115 UNC5CLQ8IV45 518 aa13.34□□□□□ -0.27
IFT88-204ENST00000461115 DNAJC10Q8IXB1 793 aa13.34□□□□□ -0.27
IFT88-204ENST00000461115 SLC4A9Q96Q91 983 aa13.34□□□□□ -0.27
IFT88-204ENST00000461115 USP26Q9BXU7 913 aa13.34□□□□□ -0.27
IFT88-204ENST00000461115 TBC1D2Q9BYX2 928 aa13.34□□□□□ -0.27
IFT88-204ENST00000461115 SPATA31A6Q5VVP1 1343 aa13.34□□□□□ -0.27
IFT88-204ENST00000461115 COL5A3P25940 1745 aaPredicted RBP13.33□□□□□ -0.28
IFT88-204ENST00000461115 SASH1O94885 1247 aa13.33□□□□□ -0.28
IFT88-204ENST00000461115 ADAMTS2O95450 1211 aa13.33□□□□□ -0.28
IFT88-204ENST00000461115 CYP19A1P11511 503 aaPredicted RBP13.33□□□□□ -0.28
IFT88-204ENST00000461115 PIP4K2AP48426 406 aaPredicted RBP13.33□□□□□ -0.28
IFT88-204ENST00000461115 VPS72Q15906 364 aa13.33□□□□□ -0.28
IFT88-204ENST00000461115 CASC1Q6TDU7 716 aa13.33□□□□□ -0.28
IFT88-204ENST00000461115 THSD7AQ9UPZ6 1657 aa13.33□□□□□ -0.28
IFT88-204ENST00000461115 FOXO4P98177 505 aa13.32□□□□□ -0.28
IFT88-204ENST00000461115 TCIRG1Q13488 830 aa13.32□□□□□ -0.28
IFT88-204ENST00000461115 CLASRPQ8N2M8 674 aaKnown RBP13.32□□□□□ -0.28
IFT88-204ENST00000461115 MARCH10Q8NA82 808 aaPredicted RBP13.32□□□□□ -0.28
IFT88-204ENST00000461115 IL27Q8NEV9 243 aa13.32□□□□□ -0.28
IFT88-204ENST00000461115 CWC25Q9NXE8 425 aaPredicted RBP13.32□□□□□ -0.28
IFT88-204ENST00000461115 MYH3P11055 1940 aa13.32□□□□□ -0.28
IFT88-204ENST00000461115 MYH14Q7Z406 1995 aaKnown RBP13.31□□□□□ -0.28
IFT88-204ENST00000461115 A0A087WZG4 1122 aa13.31□□□□□ -0.28
IFT88-204ENST00000461115 UBAP1LF5GYI3 381 aa13.31□□□□□ -0.28
IFT88-204ENST00000461115 REC8O95072 547 aa13.31□□□□□ -0.28
IFT88-204ENST00000461115 CHMLP26374 656 aa13.31□□□□□ -0.28
IFT88-204ENST00000461115 PLA2G12BQ9BX93 195 aa13.31□□□□□ -0.28
IFT88-204ENST00000461115 IL1RAPL2Q9NP60 686 aa13.31□□□□□ -0.28
IFT88-204ENST00000461115 ERC2O15083 957 aa13.3□□□□□ -0.28
IFT88-204ENST00000461115 GLRX3O76003 335 aaKnown RBP13.3□□□□□ -0.28
IFT88-204ENST00000461115 IL6STP40189 918 aaPredicted RBP13.3□□□□□ -0.28
IFT88-204ENST00000461115 PIP4K2BP78356 416 aa13.3□□□□□ -0.28
IFT88-204ENST00000461115 PTPN12Q05209 780 aaKnown RBP13.3□□□□□ -0.28
IFT88-204ENST00000461115 GIGYF2Q6Y7W6 1299 aaKnown RBP13.3□□□□□ -0.28
IFT88-204ENST00000461115 UBE3BQ7Z3V4 1068 aa13.3□□□□□ -0.28
IFT88-204ENST00000461115 ANTXR1Q9H6X2 564 aa13.3□□□□□ -0.28
IFT88-204ENST00000461115 DAXXQ9UER7 740 aaPredicted RBP13.3□□□□□ -0.28
IFT88-204ENST00000461115 PA2G4Q9UQ80 394 aaKnown RBP13.3□□□□□ -0.28
IFT88-204ENST00000461115 PCDHB13Q9Y5F0 798 aa13.3□□□□□ -0.28
IFT88-204ENST00000461115 MAP3K15Q6ZN16 1313 aa13.3□□□□□ -0.28
IFT88-204ENST00000461115 ERVV-1B6SEH8 477 aa13.3□□□□□ -0.28
IFT88-204ENST00000461115 ATP5J2-PTCD1G3V325 749 aa13.3□□□□□ -0.28
IFT88-204ENST00000461115 PRIM1P49642 420 aaKnown RBP13.3□□□□□ -0.28
IFT88-204ENST00000461115 G3BP1Q13283 466 aaKnown RBP eCLIP13.3□□□□□ -0.28
IFT88-204ENST00000461115 SGIP1Q9BQI5 828 aa13.3□□□□□ -0.28
IFT88-204ENST00000461115 ESYT1Q9BSJ8 1104 aa13.3□□□□□ -0.28
IFT88-204ENST00000461115 SLC4A3P48751 1232 aa13.29□□□□□ -0.28
IFT88-204ENST00000461115 HSP90AB3PQ58FF7 597 aa13.29□□□□□ -0.28
IFT88-204ENST00000461115 NUTM1Q86Y26 1132 aa13.29□□□□□ -0.28
IFT88-204ENST00000461115 GPR108Q9NPR9 543 aa13.29□□□□□ -0.28
IFT88-204ENST00000461115 ECHDC1Q9NTX5 307 aa13.29□□□□□ -0.28
IFT88-204ENST00000461115 CDHR2Q9BYE9 1310 aa13.28□□□□□ -0.28
IFT88-204ENST00000461115 RGL2O15211 777 aa13.28□□□□□ -0.28
IFT88-204ENST00000461115 ATMINO43313 823 aaPredicted RBP13.28□□□□□ -0.28
IFT88-204ENST00000461115 PCCAP05165 728 aaPredicted RBP13.28□□□□□ -0.28
IFT88-204ENST00000461115 ASTLQ6HA08 431 aaPredicted RBP13.28□□□□□ -0.28
IFT88-204ENST00000461115 TICAM2Q86XR7 235 aa13.28□□□□□ -0.28
IFT88-204ENST00000461115 EAF2Q96CJ1 260 aaPredicted RBP13.28□□□□□ -0.28
IFT88-204ENST00000461115 NUTM2BA6NNL0 878 aaPredicted RBP13.27□□□□□ -0.29
IFT88-204ENST00000461115 NUTM2EB1AL46 878 aaPredicted RBP13.27□□□□□ -0.29
IFT88-204ENST00000461115 EIF5P55010 431 aaKnown RBP13.27□□□□□ -0.29
IFT88-204ENST00000461115 GSE1Q14687 1217 aa13.27□□□□□ -0.29
IFT88-204ENST00000461115 RABEP1Q15276 862 aa13.27□□□□□ -0.29
IFT88-204ENST00000461115 TSHZ3Q63HK5 1081 aa13.27□□□□□ -0.29
IFT88-204ENST00000461115 KIF6Q6ZMV9 814 aa13.27□□□□□ -0.29
IFT88-204ENST00000461115 NUTM2AQ8IVF1 878 aaPredicted RBP13.27□□□□□ -0.29
IFT88-204ENST00000461115 ZBTB3Q9H5J0 574 aa13.27□□□□□ -0.29
IFT88-204ENST00000461115 SNRKQ9NRH2 765 aa13.27□□□□□ -0.29
IFT88-204ENST00000461115 NHSQ6T4R5 1651 aa13.26□□□□□ -0.29
IFT88-204ENST00000461115 CIAO1O76071 339 aa13.26□□□□□ -0.29
IFT88-204ENST00000461115 CSF1RP07333 972 aa13.26□□□□□ -0.29
IFT88-204ENST00000461115 DDIT3P35638 169 aa13.26□□□□□ -0.29
IFT88-204ENST00000461115 ANAPC15P60006 121 aa13.26□□□□□ -0.29
IFT88-204ENST00000461115 OS9Q13438 667 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms