RNA–Protein interactions for RNA: ENST00000461055.2

NEDD9-206, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-206ENST00000461055 PRIM1P49642 420 aaKnown RBP13.56□□□□□ -0.24
NEDD9-206ENST00000461055 PDE1AP54750 535 aa13.56□□□□□ -0.24
NEDD9-206ENST00000461055 KIF6Q6ZMV9 814 aa13.56□□□□□ -0.24
NEDD9-206ENST00000461055 CWC25Q9NXE8 425 aaPredicted RBP13.56□□□□□ -0.24
NEDD9-206ENST00000461055 EXOC6BQ9Y2D4 811 aa13.56□□□□□ -0.24
NEDD9-206ENST00000461055 RGPD3A6NKT7 1758 aaPredicted RBP13.55□□□□□ -0.24
NEDD9-206ENST00000461055 RGPD4Q7Z3J3 1758 aa13.55□□□□□ -0.24
NEDD9-206ENST00000461055 ITGB4P16144 1822 aa13.55□□□□□ -0.24
NEDD9-206ENST00000461055 BECN1Q14457 450 aa13.55□□□□□ -0.24
NEDD9-206ENST00000461055 KLHL34Q8N239 644 aa13.55□□□□□ -0.24
NEDD9-206ENST00000461055 RHPN1Q8TCX5 695 aa13.55□□□□□ -0.24
NEDD9-206ENST00000461055 RBM42Q9BTD8 480 aaKnown RBP13.55□□□□□ -0.24
NEDD9-206ENST00000461055 H7C1W4 665 aa13.54□□□□□ -0.24
NEDD9-206ENST00000461055 MX1P20591 662 aa13.54□□□□□ -0.24
NEDD9-206ENST00000461055 G3BP1Q13283 466 aaKnown RBP eCLIP13.54□□□□□ -0.24
NEDD9-206ENST00000461055 RABL6Q3YEC7 729 aaPredicted RBP13.54□□□□□ -0.24
NEDD9-206ENST00000461055 DNAJC10Q8IXB1 793 aa13.54□□□□□ -0.24
NEDD9-206ENST00000461055 CLASRPQ8N2M8 674 aaKnown RBP13.54□□□□□ -0.24
NEDD9-206ENST00000461055 AKT1S1Q96B36 256 aa13.54□□□□□ -0.24
NEDD9-206ENST00000461055 SUCLG2Q96I99 432 aa13.54□□□□□ -0.24
NEDD9-206ENST00000461055 SALL3Q9BXA9 1300 aa13.54□□□□□ -0.24
NEDD9-206ENST00000461055 A0A087WZG4 1122 aa13.53□□□□□ -0.24
NEDD9-206ENST00000461055 ERVV-1B6SEH8 477 aa13.53□□□□□ -0.24
NEDD9-206ENST00000461055 SMARCA5O60264 1052 aaPredicted RBP13.53□□□□□ -0.24
NEDD9-206ENST00000461055 SEC24BO95487 1268 aa13.53□□□□□ -0.24
NEDD9-206ENST00000461055 CYP19A1P11511 503 aaPredicted RBP13.53□□□□□ -0.24
NEDD9-206ENST00000461055 IL6STP40189 918 aaPredicted RBP13.53□□□□□ -0.24
NEDD9-206ENST00000461055 OS9Q13438 667 aaPredicted RBP13.53□□□□□ -0.24
NEDD9-206ENST00000461055 TCIRG1Q13488 830 aa13.53□□□□□ -0.24
NEDD9-206ENST00000461055 C16orf71Q8IYS4 520 aaPredicted RBP13.53□□□□□ -0.24
NEDD9-206ENST00000461055 IL27Q8NEV9 243 aa13.53□□□□□ -0.24
NEDD9-206ENST00000461055 GPATCH3Q96I76 525 aa13.53□□□□□ -0.24
NEDD9-206ENST00000461055 C22orf23Q9BZE7 217 aa13.53□□□□□ -0.24
NEDD9-206ENST00000461055 BICC1Q9H694 974 aaKnown RBP13.53□□□□□ -0.24
NEDD9-206ENST00000461055 TTC41PQ6P2S7 1318 aa13.53□□□□□ -0.24
NEDD9-206ENST00000461055 USP42Q9H9J4 1324 aaKnown RBP13.53□□□□□ -0.24
NEDD9-206ENST00000461055 APBB1O00213 710 aa13.52□□□□□ -0.25
NEDD9-206ENST00000461055 ERC2O15083 957 aa13.52□□□□□ -0.25
NEDD9-206ENST00000461055 RBM25P49756 843 aaKnown RBP13.52□□□□□ -0.25
NEDD9-206ENST00000461055 GPR162Q16538 588 aa13.52□□□□□ -0.25
NEDD9-206ENST00000461055 TBC1D9Q6ZT07 1266 aa13.52□□□□□ -0.25
NEDD9-206ENST00000461055 NLGN2Q8NFZ4 835 aa13.52□□□□□ -0.25
NEDD9-206ENST00000461055 SYTL4Q96C24 671 aaPredicted RBP13.52□□□□□ -0.25
NEDD9-206ENST00000461055 ISCA1Q9BUE6 129 aa13.52□□□□□ -0.25
NEDD9-206ENST00000461055 COPRSQ9NQ92 184 aa13.52□□□□□ -0.25
NEDD9-206ENST00000461055 ARFGEF2Q9Y6D5 1785 aa13.51□□□□□ -0.25
NEDD9-206ENST00000461055 MAP3K15Q6ZN16 1313 aa13.51□□□□□ -0.25
NEDD9-206ENST00000461055 RGL2O15211 777 aa13.51□□□□□ -0.25
NEDD9-206ENST00000461055 EPB41L2O43491 1005 aaKnown RBP13.51□□□□□ -0.25
NEDD9-206ENST00000461055 GSPT1P15170 499 aaKnown RBP13.51□□□□□ -0.25
NEDD9-206ENST00000461055 TTLL7Q6ZT98 887 aa13.51□□□□□ -0.25
NEDD9-206ENST00000461055 KAZALD1Q96I82 304 aa13.51□□□□□ -0.25
NEDD9-206ENST00000461055 PNPLA7Q6ZV29 1317 aa13.5□□□□□ -0.25
NEDD9-206ENST00000461055 REC8O95072 547 aa13.5□□□□□ -0.25
NEDD9-206ENST00000461055 SDSP20132 328 aa13.5□□□□□ -0.25
NEDD9-206ENST00000461055 HMGB2P26583 209 aaKnown RBP13.5□□□□□ -0.25
NEDD9-206ENST00000461055 MFAP1P55081 439 aaKnown RBP13.5□□□□□ -0.25
NEDD9-206ENST00000461055 CASP7P55210 303 aa13.5□□□□□ -0.25
NEDD9-206ENST00000461055 GIGYF2Q6Y7W6 1299 aaKnown RBP13.5□□□□□ -0.25
NEDD9-206ENST00000461055 FBXO3Q9UK99 471 aa13.5□□□□□ -0.25
NEDD9-206ENST00000461055 BTAF1O14981 1849 aa13.5□□□□□ -0.25
NEDD9-206ENST00000461055 NHSQ6T4R5 1651 aa13.5□□□□□ -0.25
NEDD9-206ENST00000461055 GLRX3O76003 335 aaKnown RBP13.49□□□□□ -0.25
NEDD9-206ENST00000461055 PCCAP05165 728 aaPredicted RBP13.49□□□□□ -0.25
NEDD9-206ENST00000461055 HSP90B1P14625 803 aaKnown RBP13.49□□□□□ -0.25
NEDD9-206ENST00000461055 PIP4K2AP48426 406 aaPredicted RBP13.49□□□□□ -0.25
NEDD9-206ENST00000461055 UBE3BQ7Z3V4 1068 aa13.49□□□□□ -0.25
NEDD9-206ENST00000461055 CICQ96RK0 1608 aaPredicted RBP13.49□□□□□ -0.25
NEDD9-206ENST00000461055 ZNF831Q5JPB2 1677 aa13.48□□□□□ -0.25
NEDD9-206ENST00000461055 LOC102724428A0A0B4J2F2 783 aa13.48□□□□□ -0.25
NEDD9-206ENST00000461055 ATP5J2-PTCD1G3V325 749 aa13.48□□□□□ -0.25
NEDD9-206ENST00000461055 IFIT2P09913 472 aaKnown RBP13.48□□□□□ -0.25
NEDD9-206ENST00000461055 SIK1P57059 783 aa13.48□□□□□ -0.25
NEDD9-206ENST00000461055 C1QTNF8P60827 252 aa13.48□□□□□ -0.25
NEDD9-206ENST00000461055 SMIM5Q71RC9 77 aa13.48□□□□□ -0.25
NEDD9-206ENST00000461055 TICAM2Q86XR7 235 aa13.48□□□□□ -0.25
NEDD9-206ENST00000461055 OTUD7AQ8TE49 926 aaPredicted RBP13.48□□□□□ -0.25
NEDD9-206ENST00000461055 AK7Q96M32 723 aa13.48□□□□□ -0.25
NEDD9-206ENST00000461055 PLA2G12BQ9BX93 195 aa13.48□□□□□ -0.25
NEDD9-206ENST00000461055 ZBTB3Q9H5J0 574 aa13.48□□□□□ -0.25
NEDD9-206ENST00000461055 TFCP2L1Q9NZI6 479 aa13.48□□□□□ -0.25
NEDD9-206ENST00000461055 DOT1LQ8TEK3 1739 aa13.47□□□□□ -0.25
NEDD9-206ENST00000461055 ZBTB38Q8NAP3 1195 aaPredicted RBP13.47□□□□□ -0.25
NEDD9-206ENST00000461055 SLC4A9Q96Q91 983 aa13.47□□□□□ -0.25
NEDD9-206ENST00000461055 ECHDC1Q9NTX5 307 aa13.47□□□□□ -0.25
NEDD9-206ENST00000461055 CCDC87Q9NVE4 849 aa13.47□□□□□ -0.25
NEDD9-206ENST00000461055 AFDNP55196 1824 aaKnown RBP13.47□□□□□ -0.25
NEDD9-206ENST00000461055 CDHR2Q9BYE9 1310 aa13.46□□□□□ -0.25
NEDD9-206ENST00000461055 ATP6V1AP38606 617 aa13.46□□□□□ -0.25
NEDD9-206ENST00000461055 RFX5P48382 616 aaPredicted RBP13.46□□□□□ -0.25
NEDD9-206ENST00000461055 EIF5P55010 431 aaKnown RBP13.46□□□□□ -0.25
NEDD9-206ENST00000461055 FOXO4P98177 505 aa13.46□□□□□ -0.25
NEDD9-206ENST00000461055 MSL1Q68DK7 614 aa13.46□□□□□ -0.25
NEDD9-206ENST00000461055 COL23A1Q86Y22 540 aaPredicted RBP13.46□□□□□ -0.25
NEDD9-206ENST00000461055 CNTROBQ8N137 903 aa13.46□□□□□ -0.25
NEDD9-206ENST00000461055 IL1RAPL2Q9NP60 686 aa13.46□□□□□ -0.25
NEDD9-206ENST00000461055 GPR108Q9NPR9 543 aa13.46□□□□□ -0.25
NEDD9-206ENST00000461055 PALLDQ8WX93 1383 aa13.45□□□□□ -0.26
NEDD9-206ENST00000461055 CIAO1O76071 339 aa13.45□□□□□ -0.26
NEDD9-206ENST00000461055 YBX3P16989 372 aaKnown RBP eCLIP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms