RNA–Protein interactions for RNA: ENST00000460430.5

CDHR4-203, Transcript of cadherin related family member 4, humanhuman

TSL 3

Gene CDHR4, Length 665 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-203ENST00000460430 MSL1Q68DK7 614 aa13.46□□□□□ -0.25
CDHR4-203ENST00000460430 NLRP10Q86W26 655 aa13.46□□□□□ -0.25
CDHR4-203ENST00000460430 ZNF34Q8IZ26 560 aa13.46□□□□□ -0.25
CDHR4-203ENST00000460430 EXOC6Q8TAG9 804 aa13.46□□□□□ -0.25
CDHR4-203ENST00000460430 COL24A1Q17RW2 1714 aa13.45□□□□□ -0.26
CDHR4-203ENST00000460430 GNAI3P08754 354 aa13.45□□□□□ -0.26
CDHR4-203ENST00000460430 UBTFL1P0CB47 393 aaPredicted RBP13.45□□□□□ -0.26
CDHR4-203ENST00000460430 TRIM28Q13263 835 aaKnown RBP13.45□□□□□ -0.26
CDHR4-203ENST00000460430 PPP1R42Q7Z4L9 355 aa13.45□□□□□ -0.26
CDHR4-203ENST00000460430 NBPF5PQ86XG9 351 aaPredicted RBP13.45□□□□□ -0.26
CDHR4-203ENST00000460430 NLGN1Q8N2Q7 840 aa13.45□□□□□ -0.26
CDHR4-203ENST00000460430 MEIS3Q99687 375 aa13.45□□□□□ -0.26
CDHR4-203ENST00000460430 UTP14AQ9BVJ6 771 aaKnown RBP13.45□□□□□ -0.26
CDHR4-203ENST00000460430 TRMT112Q9UI30 125 aaKnown RBP13.45□□□□□ -0.26
CDHR4-203ENST00000460430 IBTKQ9P2D0 1353 aaPredicted RBP13.45□□□□□ -0.26
CDHR4-203ENST00000460430 PSDA5PKW4 1024 aaPredicted RBP13.44□□□□□ -0.26
CDHR4-203ENST00000460430 GTF2E1P29083 439 aaPredicted RBP13.44□□□□□ -0.26
CDHR4-203ENST00000460430 NFIXQ14938 502 aa13.44□□□□□ -0.26
CDHR4-203ENST00000460430 UBE3BQ7Z3V4 1068 aa13.44□□□□□ -0.26
CDHR4-203ENST00000460430 NYXQ9GZU5 481 aa13.44□□□□□ -0.26
CDHR4-203ENST00000460430 HDAC5Q9UQL6 1122 aa13.44□□□□□ -0.26
CDHR4-203ENST00000460430 SH3TC1Q8TE82 1336 aa13.43□□□□□ -0.26
CDHR4-203ENST00000460430 CASZ1Q86V15 1759 aa13.43□□□□□ -0.26
CDHR4-203ENST00000460430 RTL5Q5HYW3 569 aaPredicted RBP13.43□□□□□ -0.26
CDHR4-203ENST00000460430 SUSD4Q5VX71 490 aa13.43□□□□□ -0.26
CDHR4-203ENST00000460430 ZBTB38Q8NAP3 1195 aaPredicted RBP13.43□□□□□ -0.26
CDHR4-203ENST00000460430 SLC16A10Q8TF71 515 aa13.43□□□□□ -0.26
CDHR4-203ENST00000460430 USP44Q9H0E7 712 aa13.43□□□□□ -0.26
CDHR4-203ENST00000460430 ZBTB7BO15156 539 aaPredicted RBP13.42□□□□□ -0.26
CDHR4-203ENST00000460430 GNAI2P04899 355 aa13.42□□□□□ -0.26
CDHR4-203ENST00000460430 PCCAP05165 728 aaPredicted RBP13.42□□□□□ -0.26
CDHR4-203ENST00000460430 MMP10P09238 476 aa13.42□□□□□ -0.26
CDHR4-203ENST00000460430 NBPF7P0C2Y1 421 aaPredicted RBP13.42□□□□□ -0.26
CDHR4-203ENST00000460430 AAMPQ13685 434 aa13.42□□□□□ -0.26
CDHR4-203ENST00000460430 CNBD1Q8NA66 436 aa13.42□□□□□ -0.26
CDHR4-203ENST00000460430 PDGFDQ9GZP0 370 aaPredicted RBP13.42□□□□□ -0.26
CDHR4-203ENST00000460430 C1orf115Q9H7X2 142 aa13.42□□□□□ -0.26
CDHR4-203ENST00000460430 PARP3Q9Y6F1 533 aa13.42□□□□□ -0.26
CDHR4-203ENST00000460430 UTYO14607 1347 aa13.41□□□□□ -0.26
CDHR4-203ENST00000460430 SOCS7O14512 581 aa13.41□□□□□ -0.26
CDHR4-203ENST00000460430 ZBTB7AO95365 584 aa13.41□□□□□ -0.26
CDHR4-203ENST00000460430 NTSR2O95665 410 aa13.41□□□□□ -0.26
CDHR4-203ENST00000460430 HSP90B1P14625 803 aaKnown RBP13.41□□□□□ -0.26
CDHR4-203ENST00000460430 ST5P78524 1137 aa13.41□□□□□ -0.26
CDHR4-203ENST00000460430 DDR1Q08345 913 aa13.41□□□□□ -0.26
CDHR4-203ENST00000460430 TPTE2Q6XPS3 522 aa13.41□□□□□ -0.26
CDHR4-203ENST00000460430 JARID2Q92833 1246 aaPredicted RBP13.41□□□□□ -0.26
CDHR4-203ENST00000460430 FAM89AQ96GI7 184 aa13.41□□□□□ -0.26
CDHR4-203ENST00000460430 ZBTB40Q9NUA8 1239 aa13.41□□□□□ -0.26
CDHR4-203ENST00000460430 LRRFIP2Q9Y608 721 aaKnown RBP13.41□□□□□ -0.26
CDHR4-203ENST00000460430 CDHR2Q9BYE9 1310 aa13.4□□□□□ -0.26
CDHR4-203ENST00000460430 H7C1W4 665 aa13.4□□□□□ -0.26
CDHR4-203ENST00000460430 POLRMTO00411 1230 aaKnown RBP13.4□□□□□ -0.26
CDHR4-203ENST00000460430 IRS4O14654 1257 aaPredicted RBP13.4□□□□□ -0.26
CDHR4-203ENST00000460430 NUTM1Q86Y26 1132 aa13.4□□□□□ -0.26
CDHR4-203ENST00000460430 MTFR1LQ9H019 292 aa13.4□□□□□ -0.26
CDHR4-203ENST00000460430 SERPINB2P05120 415 aa13.39□□□□□ -0.27
CDHR4-203ENST00000460430 POLD1P28340 1107 aa13.39□□□□□ -0.27
CDHR4-203ENST00000460430 TM4SF1P30408 202 aa13.39□□□□□ -0.27
CDHR4-203ENST00000460430 ERFEQ4G0M1 354 aa13.39□□□□□ -0.27
CDHR4-203ENST00000460430 ERICH6BQ5W0A0 696 aa13.39□□□□□ -0.27
CDHR4-203ENST00000460430 SUCLG2Q96I99 432 aa13.39□□□□□ -0.27
CDHR4-203ENST00000460430 ABCC12Q96J65 1359 aa13.39□□□□□ -0.27
CDHR4-203ENST00000460430 LAMB2P55268 1798 aa13.39□□□□□ -0.27
CDHR4-203ENST00000460430 CASP7P55210 303 aa13.38□□□□□ -0.27
CDHR4-203ENST00000460430 BICC1Q9H694 974 aaKnown RBP13.38□□□□□ -0.27
CDHR4-203ENST00000460430 CHMP3Q9Y3E7 222 aa13.38□□□□□ -0.27
CDHR4-203ENST00000460430 PDE8AO60658 829 aa13.37□□□□□ -0.27
CDHR4-203ENST00000460430 HCLS1P14317 486 aaPredicted RBP13.37□□□□□ -0.27
CDHR4-203ENST00000460430 PRR5LQ6MZQ0 368 aa13.37□□□□□ -0.27
CDHR4-203ENST00000460430 SYNE4Q8N205 404 aa13.37□□□□□ -0.27
CDHR4-203ENST00000460430 ATF5Q9Y2D1 282 aaPredicted RBP13.37□□□□□ -0.27
CDHR4-203ENST00000460430 DDX60Q8IY21 1712 aaKnown RBP13.36□□□□□ -0.27
CDHR4-203ENST00000460430 CTSWP56202 376 aa13.36□□□□□ -0.27
CDHR4-203ENST00000460430 CEP85Q6P2H3 762 aa13.36□□□□□ -0.27
CDHR4-203ENST00000460430 CCDC24Q8N4L8 307 aa13.36□□□□□ -0.27
CDHR4-203ENST00000460430 PLA2G12BQ9BX93 195 aa13.36□□□□□ -0.27
CDHR4-203ENST00000460430 GTF3C3Q9Y5Q9 886 aa13.36□□□□□ -0.27
CDHR4-203ENST00000460430 RIC1Q4ADV7 1423 aa13.36□□□□□ -0.27
CDHR4-203ENST00000460430 NRXN2Q9P2S2 1712 aa13.36□□□□□ -0.27
CDHR4-203ENST00000460430 TNRC6CQ9HCJ0 1690 aaKnown RBP13.35□□□□□ -0.27
CDHR4-203ENST00000460430 HMMRO75330 724 aa13.35□□□□□ -0.27
CDHR4-203ENST00000460430 SRGAP3O43295 1099 aa13.34□□□□□ -0.27
CDHR4-203ENST00000460430 FOXO4P98177 505 aa13.34□□□□□ -0.27
CDHR4-203ENST00000460430 CCDC152Q4G0S7 254 aa13.34□□□□□ -0.27
CDHR4-203ENST00000460430 EPHA10Q5JZY3 1008 aa13.34□□□□□ -0.27
CDHR4-203ENST00000460430 LMBR1LQ6UX01 489 aa13.34□□□□□ -0.27
CDHR4-203ENST00000460430 RPAP2Q8IXW5 612 aaPredicted RBP13.34□□□□□ -0.27
CDHR4-203ENST00000460430 ANKRD44Q8N8A2 993 aa13.34□□□□□ -0.27
CDHR4-203ENST00000460430 KAZALD1Q96I82 304 aa13.34□□□□□ -0.27
CDHR4-203ENST00000460430 CCDC136Q96JN2 1154 aa13.34□□□□□ -0.27
CDHR4-203ENST00000460430 NLRP3Q96P20 1036 aa13.34□□□□□ -0.27
CDHR4-203ENST00000460430 CCDC85AQ96PX6 553 aaPredicted RBP13.34□□□□□ -0.27
CDHR4-203ENST00000460430 PCDHB15Q9Y5E8 787 aa13.34□□□□□ -0.27
CDHR4-203ENST00000460430 MYH3P11055 1940 aa13.33□□□□□ -0.28
CDHR4-203ENST00000460430 FAM161AQ3B820 660 aa13.33□□□□□ -0.28
CDHR4-203ENST00000460430 RABL6Q3YEC7 729 aaPredicted RBP13.33□□□□□ -0.28
CDHR4-203ENST00000460430 TAF7LQ5H9L4 462 aa13.33□□□□□ -0.28
CDHR4-203ENST00000460430 SLC10A5Q5PT55 438 aa13.33□□□□□ -0.28
CDHR4-203ENST00000460430 PPP4R2Q9NY27 417 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms