RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 PLIN1O60240 522 aa13.01□□□□□ -0.33
GARNL3-211ENST00000460176 IGKV5-2P06315 115 aa13.01□□□□□ -0.33
GARNL3-211ENST00000460176 DDR1Q08345 913 aa13.01□□□□□ -0.33
GARNL3-211ENST00000460176 TRIM28Q13263 835 aaKnown RBP13.01□□□□□ -0.33
GARNL3-211ENST00000460176 BEND3Q5T5X7 828 aa13.01□□□□□ -0.33
GARNL3-211ENST00000460176 RNF123Q5XPI4 1314 aa13.01□□□□□ -0.33
GARNL3-211ENST00000460176 CARMIL3Q8ND23 1372 aa13.01□□□□□ -0.33
GARNL3-211ENST00000460176 DDX60Q8IY21 1712 aaKnown RBP13□□□□□ -0.33
GARNL3-211ENST00000460176 RRP1P56182 461 aaKnown RBP13□□□□□ -0.33
GARNL3-211ENST00000460176 NEXNQ0ZGT2 675 aa13□□□□□ -0.33
GARNL3-211ENST00000460176 SLC4A10Q6U841 1118 aa13□□□□□ -0.33
GARNL3-211ENST00000460176 BICDL1Q6ZP65 573 aa13□□□□□ -0.33
GARNL3-211ENST00000460176 NLRP10Q86W26 655 aa13□□□□□ -0.33
GARNL3-211ENST00000460176 LINS1Q8NG48 757 aa13□□□□□ -0.33
GARNL3-211ENST00000460176 SETDB2Q96T68 719 aa13□□□□□ -0.33
GARNL3-211ENST00000460176 ANKRD31Q8N7Z5 1873 aa12.99□□□□□ -0.33
GARNL3-211ENST00000460176 KIF13BQ9NQT8 1826 aa12.99□□□□□ -0.33
GARNL3-211ENST00000460176 IBTKQ9P2D0 1353 aaPredicted RBP12.99□□□□□ -0.33
GARNL3-211ENST00000460176 NEURL1BA8MQ27 555 aa12.99□□□□□ -0.33
GARNL3-211ENST00000460176 POLRMTO00411 1230 aaKnown RBP12.99□□□□□ -0.33
GARNL3-211ENST00000460176 CENPBP07199 599 aaPredicted RBP12.99□□□□□ -0.33
GARNL3-211ENST00000460176 MMP10P09238 476 aa12.99□□□□□ -0.33
GARNL3-211ENST00000460176 RLBP1P12271 317 aa12.99□□□□□ -0.33
GARNL3-211ENST00000460176 CWF19L2Q2TBE0 894 aaKnown RBP12.99□□□□□ -0.33
GARNL3-211ENST00000460176 PARP10Q53GL7 1025 aa12.99□□□□□ -0.33
GARNL3-211ENST00000460176 SUSD4Q5VX71 490 aa12.99□□□□□ -0.33
GARNL3-211ENST00000460176 INTS3Q68E01 1043 aaKnown RBP12.99□□□□□ -0.33
GARNL3-211ENST00000460176 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.99□□□□□ -0.33
GARNL3-211ENST00000460176 CLUAP1Q96AJ1 413 aa12.99□□□□□ -0.33
GARNL3-211ENST00000460176 SGIP1Q9BQI5 828 aa12.99□□□□□ -0.33
GARNL3-211ENST00000460176 TNRC6CQ9HCJ0 1690 aaKnown RBP12.99□□□□□ -0.33
GARNL3-211ENST00000460176 PTGER2P43116 358 aa12.98□□□□□ -0.33
GARNL3-211ENST00000460176 CCT4P50991 539 aaKnown RBP12.98□□□□□ -0.33
GARNL3-211ENST00000460176 DZIP1LQ8IYY4 767 aaKnown RBP12.98□□□□□ -0.33
GARNL3-211ENST00000460176 CCDC191Q8NCU4 936 aa12.98□□□□□ -0.33
GARNL3-211ENST00000460176 SRCIN1Q9C0H9 1055 aa12.98□□□□□ -0.33
GARNL3-211ENST00000460176 SUPT16HQ9Y5B9 1047 aaKnown RBP12.98□□□□□ -0.33
GARNL3-211ENST00000460176 LRP5O75197 1615 aa12.98□□□□□ -0.33
GARNL3-211ENST00000460176 ALDH1L1O75891 902 aa12.97□□□□□ -0.33
GARNL3-211ENST00000460176 NTSR2O95665 410 aa12.97□□□□□ -0.33
GARNL3-211ENST00000460176 GCKRQ14397 625 aa12.97□□□□□ -0.33
GARNL3-211ENST00000460176 C20orf194Q5TEA3 1177 aa12.97□□□□□ -0.33
GARNL3-211ENST00000460176 TMEM57Q8N5G2 664 aa12.97□□□□□ -0.33
GARNL3-211ENST00000460176 PANK1Q8TE04 598 aa12.97□□□□□ -0.33
GARNL3-211ENST00000460176 CWC25Q9NXE8 425 aaPredicted RBP12.97□□□□□ -0.33
GARNL3-211ENST00000460176 KIAA1551Q9HCM1 1747 aa12.96□□□□□ -0.33
GARNL3-211ENST00000460176 FAM177BA6PVY3 158 aa12.96□□□□□ -0.33
GARNL3-211ENST00000460176 SERPINB2P05120 415 aa12.96□□□□□ -0.33
GARNL3-211ENST00000460176 MS4A1P11836 297 aa12.96□□□□□ -0.33
GARNL3-211ENST00000460176 PDE3AQ14432 1141 aa12.96□□□□□ -0.33
GARNL3-211ENST00000460176 PPP1R42Q7Z4L9 355 aa12.96□□□□□ -0.33
GARNL3-211ENST00000460176 FTSJ3Q8IY81 847 aaKnown RBP12.96□□□□□ -0.33
GARNL3-211ENST00000460176 SPON1Q9HCB6 807 aa12.96□□□□□ -0.33
GARNL3-211ENST00000460176 PARP3Q9Y6F1 533 aa12.96□□□□□ -0.33
GARNL3-211ENST00000460176 MYH3P11055 1940 aa12.96□□□□□ -0.34
GARNL3-211ENST00000460176 ABCC12Q96J65 1359 aa12.95□□□□□ -0.34
GARNL3-211ENST00000460176 POLD1P28340 1107 aa12.95□□□□□ -0.34
GARNL3-211ENST00000460176 PRR5LQ6MZQ0 368 aa12.95□□□□□ -0.34
GARNL3-211ENST00000460176 NBPF5PQ86XG9 351 aaPredicted RBP12.95□□□□□ -0.34
GARNL3-211ENST00000460176 UTP14AQ9BVJ6 771 aaKnown RBP12.95□□□□□ -0.34
GARNL3-211ENST00000460176 NYXQ9GZU5 481 aa12.95□□□□□ -0.34
GARNL3-211ENST00000460176 COL11A2P13942 1736 aaPredicted RBP12.95□□□□□ -0.34
GARNL3-211ENST00000460176 RIC1Q4ADV7 1423 aa12.95□□□□□ -0.34
GARNL3-211ENST00000460176 C10orf71Q711Q0 1435 aa12.95□□□□□ -0.34
GARNL3-211ENST00000460176 DLEC1Q9Y238 1755 aa12.94□□□□□ -0.34
GARNL3-211ENST00000460176 UTYO14607 1347 aa12.94□□□□□ -0.34
GARNL3-211ENST00000460176 H7C1W4 665 aa12.94□□□□□ -0.34
GARNL3-211ENST00000460176 PCCAP05165 728 aaPredicted RBP12.94□□□□□ -0.34
GARNL3-211ENST00000460176 CASP7P55210 303 aa12.94□□□□□ -0.34
GARNL3-211ENST00000460176 ERFEQ4G0M1 354 aa12.94□□□□□ -0.34
GARNL3-211ENST00000460176 TPTE2Q6XPS3 522 aa12.94□□□□□ -0.34
GARNL3-211ENST00000460176 NUTM1Q86Y26 1132 aa12.94□□□□□ -0.34
GARNL3-211ENST00000460176 SYNE4Q8N205 404 aa12.94□□□□□ -0.34
GARNL3-211ENST00000460176 CNBD1Q8NA66 436 aa12.94□□□□□ -0.34
GARNL3-211ENST00000460176 ZBTB38Q8NAP3 1195 aaPredicted RBP12.94□□□□□ -0.34
GARNL3-211ENST00000460176 TRMT112Q9UI30 125 aaKnown RBP12.94□□□□□ -0.34
GARNL3-211ENST00000460176 SH3TC1Q8TE82 1336 aa12.93□□□□□ -0.34
GARNL3-211ENST00000460176 GRM8O00222 908 aa12.93□□□□□ -0.34
GARNL3-211ENST00000460176 MVPQ14764 893 aaKnown RBP12.93□□□□□ -0.34
GARNL3-211ENST00000460176 CCDC24Q8N4L8 307 aa12.93□□□□□ -0.34
GARNL3-211ENST00000460176 JARID2Q92833 1246 aaPredicted RBP12.93□□□□□ -0.34
GARNL3-211ENST00000460176 FAM89AQ96GI7 184 aa12.93□□□□□ -0.34
GARNL3-211ENST00000460176 USP44Q9H0E7 712 aa12.93□□□□□ -0.34
GARNL3-211ENST00000460176 COG6Q9Y2V7 657 aa12.93□□□□□ -0.34
GARNL3-211ENST00000460176 CDHR2Q9BYE9 1310 aa12.92□□□□□ -0.34
GARNL3-211ENST00000460176 NBPF7P0C2Y1 421 aaPredicted RBP12.92□□□□□ -0.34
GARNL3-211ENST00000460176 RTL5Q5HYW3 569 aaPredicted RBP12.92□□□□□ -0.34
GARNL3-211ENST00000460176 SLC10A5Q5PT55 438 aa12.92□□□□□ -0.34
GARNL3-211ENST00000460176 UBE3BQ7Z3V4 1068 aa12.92□□□□□ -0.34
GARNL3-211ENST00000460176 ITPRIPQ8IWB1 547 aa12.92□□□□□ -0.34
GARNL3-211ENST00000460176 MEIS3Q99687 375 aa12.92□□□□□ -0.34
GARNL3-211ENST00000460176 GTF2E1P29083 439 aaPredicted RBP12.91□□□□□ -0.34
GARNL3-211ENST00000460176 ST5P78524 1137 aa12.91□□□□□ -0.34
GARNL3-211ENST00000460176 C9orf78Q9NZ63 289 aaPredicted RBP12.91□□□□□ -0.34
GARNL3-211ENST00000460176 IRS4O14654 1257 aaPredicted RBP12.9□□□□□ -0.34
GARNL3-211ENST00000460176 ZBTB7BO15156 539 aaPredicted RBP12.9□□□□□ -0.34
GARNL3-211ENST00000460176 NPHP1O15259 732 aa12.9□□□□□ -0.34
GARNL3-211ENST00000460176 HCLS1P14317 486 aaPredicted RBP12.9□□□□□ -0.34
GARNL3-211ENST00000460176 C3orf67Q6ZVT6 689 aa12.9□□□□□ -0.34
GARNL3-211ENST00000460176 KAZALD1Q96I82 304 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms