RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 TRAF5O00463 557 aa22.22■■□□□ 1.15
TMEM50B-205ENST00000459909 U2SURPO15042 1029 aaKnown RBP22.22■■□□□ 1.15
TMEM50B-205ENST00000459909 AOC2O75106 756 aa22.22■■□□□ 1.15
TMEM50B-205ENST00000459909 SNRPA1P09661 255 aaKnown RBP22.22■■□□□ 1.15
TMEM50B-205ENST00000459909 GRIPAP1Q4V328 841 aa22.22■■□□□ 1.15
TMEM50B-205ENST00000459909 LTBP1Q14766 1721 aa22.22■■□□□ 1.15
TMEM50B-205ENST00000459909 PRAMEF22A3QJZ6 481 aa22.21■■□□□ 1.15
TMEM50B-205ENST00000459909 CRY2Q49AN0 593 aa22.21■■□□□ 1.15
TMEM50B-205ENST00000459909 LARGE2Q8N3Y3 721 aa22.2■■□□□ 1.14
TMEM50B-205ENST00000459909 COL4A5P29400 1685 aa22.2■■□□□ 1.14
TMEM50B-205ENST00000459909 SAPCD2Q86UD0 394 aa22.19■■□□□ 1.14
TMEM50B-205ENST00000459909 HHIPL1Q96JK4 782 aa22.19■■□□□ 1.14
TMEM50B-205ENST00000459909 NBPF26B4DH59 902 aa22.18■■□□□ 1.14
TMEM50B-205ENST00000459909 BRPF1P55201 1214 aaPredicted RBP22.18■■□□□ 1.14
TMEM50B-205ENST00000459909 NBPF10Q6P3W6 841 aaKnown RBP22.18■■□□□ 1.14
TMEM50B-205ENST00000459909 NBPF15Q8N660 670 aa22.18■■□□□ 1.14
TMEM50B-205ENST00000459909 NYXQ9GZU5 481 aa22.18■■□□□ 1.14
TMEM50B-205ENST00000459909 COL3A1P02461 1466 aaPredicted RBP22.17■■□□□ 1.14
TMEM50B-205ENST00000459909 HLFQ16534 295 aa22.17■■□□□ 1.14
TMEM50B-205ENST00000459909 ADARB2Q9NS39 739 aaKnown RBP22.17■■□□□ 1.14
TMEM50B-205ENST00000459909 CELF2O95319 508 aaKnown RBP22.16■■□□□ 1.14
TMEM50B-205ENST00000459909 HOXA10P31260 410 aaPredicted RBP22.16■■□□□ 1.14
TMEM50B-205ENST00000459909 CC2D1BQ5T0F9 858 aaKnown RBP22.16■■□□□ 1.14
TMEM50B-205ENST00000459909 NIM1KQ8IY84 436 aa22.16■■□□□ 1.14
TMEM50B-205ENST00000459909 RPGRQ92834 1020 aaKnown RBP22.16■■□□□ 1.14
TMEM50B-205ENST00000459909 DGKZQ13574 1117 aa22.15■■□□□ 1.14
TMEM50B-205ENST00000459909 ABCC12Q96J65 1359 aa22.14■■□□□ 1.14
TMEM50B-205ENST00000459909 TRPM7Q96QT4 1865 aa22.14■■□□□ 1.13
TMEM50B-205ENST00000459909 PER1O15534 1290 aaPredicted RBP22.14■■□□□ 1.13
TMEM50B-205ENST00000459909 NUTM1Q86Y26 1132 aa22.14■■□□□ 1.13
TMEM50B-205ENST00000459909 PHACTR3Q96KR7 559 aa22.14■■□□□ 1.13
TMEM50B-205ENST00000459909 GPRC5DQ9NZD1 345 aa22.14■■□□□ 1.13
TMEM50B-205ENST00000459909 ZNF316A6NFI3 1004 aaPredicted RBP22.13■■□□□ 1.13
TMEM50B-205ENST00000459909 RBM17Q96I25 401 aaKnown RBP22.12■■□□□ 1.13
TMEM50B-205ENST00000459909 VPS33BQ9H267 617 aa22.12■■□□□ 1.13
TMEM50B-205ENST00000459909 RIC1Q4ADV7 1423 aa22.12■■□□□ 1.13
TMEM50B-205ENST00000459909 ERVV-1B6SEH8 477 aa22.11■■□□□ 1.13
TMEM50B-205ENST00000459909 PPEF1O14829 653 aaPredicted RBP22.11■■□□□ 1.13
TMEM50B-205ENST00000459909 PPIP5K2O43314 1243 aa22.11■■□□□ 1.13
TMEM50B-205ENST00000459909 PRKAR2BP31323 418 aa22.11■■□□□ 1.13
TMEM50B-205ENST00000459909 CIAPIN1Q6FI81 312 aa22.11■■□□□ 1.13
TMEM50B-205ENST00000459909 RTF1Q92541 710 aaKnown RBP22.11■■□□□ 1.13
TMEM50B-205ENST00000459909 CRAMP1Q96RY5 1269 aa22.11■■□□□ 1.13
TMEM50B-205ENST00000459909 PGAP2Q9UHJ9 254 aa22.11■■□□□ 1.13
TMEM50B-205ENST00000459909 GLIS2Q9BZE0 524 aaPredicted RBP22.1■■□□□ 1.13
TMEM50B-205ENST00000459909 RSPH6AQ9H0K4 717 aa22.1■■□□□ 1.13
TMEM50B-205ENST00000459909 MCM10Q7L590 875 aa22.09■■□□□ 1.13
TMEM50B-205ENST00000459909 ZC3H15Q8WU90 426 aaKnown RBP22.09■■□□□ 1.13
TMEM50B-205ENST00000459909 TMX4Q9H1E5 349 aaPredicted RBP22.09■■□□□ 1.13
TMEM50B-205ENST00000459909 IBTKQ9P2D0 1353 aaPredicted RBP22.09■■□□□ 1.13
TMEM50B-205ENST00000459909 NPC1L1Q9UHC9 1359 aa22.09■■□□□ 1.13
TMEM50B-205ENST00000459909 CXCL9Q07325 125 aa22.08■■□□□ 1.13
TMEM50B-205ENST00000459909 NOGQ13253 232 aa22.08■■□□□ 1.13
TMEM50B-205ENST00000459909 AOC3Q16853 763 aa22.08■■□□□ 1.13
TMEM50B-205ENST00000459909 ZNRF3Q9ULT6 936 aa22.08■■□□□ 1.13
TMEM50B-205ENST00000459909 TCERG1O14776 1098 aaKnown RBP22.07■■□□□ 1.12
TMEM50B-205ENST00000459909 ZNF408Q9H9D4 720 aa22.07■■□□□ 1.12
TMEM50B-205ENST00000459909 MAP3K15Q6ZN16 1313 aa22.06■■□□□ 1.12
TMEM50B-205ENST00000459909 CDHR2Q9BYE9 1310 aa22.06■■□□□ 1.12
TMEM50B-205ENST00000459909 GMPSP49915 693 aaPredicted RBP22.06■■□□□ 1.12
TMEM50B-205ENST00000459909 CDC37L1Q7L3B6 337 aa22.06■■□□□ 1.12
TMEM50B-205ENST00000459909 SLC51AQ86UW1 340 aa22.06■■□□□ 1.12
TMEM50B-205ENST00000459909 CASP8AP2Q9UKL3 1982 aa22.05■■□□□ 1.12
TMEM50B-205ENST00000459909 NGEFQ8N5V2 710 aa22.05■■□□□ 1.12
TMEM50B-205ENST00000459909 SUPT20HQ8NEM7 779 aa22.05■■□□□ 1.12
TMEM50B-205ENST00000459909 UBN2Q6ZU65 1347 aa22.05■■□□□ 1.12
TMEM50B-205ENST00000459909 TNRC18O15417 2968 aaPredicted RBP22.04■■□□□ 1.12
TMEM50B-205ENST00000459909 SUSD4Q5VX71 490 aa22.04■■□□□ 1.12
TMEM50B-205ENST00000459909 KIF6Q6ZMV9 814 aa22.04■■□□□ 1.12
TMEM50B-205ENST00000459909 ATP6V0A2Q9Y487 856 aa22.04■■□□□ 1.12
TMEM50B-205ENST00000459909 HTATSF1O43719 755 aaKnown RBP22.03■■□□□ 1.12
TMEM50B-205ENST00000459909 GPTP24298 496 aa22.03■■□□□ 1.12
TMEM50B-205ENST00000459909 TAF7Q15545 349 aaPredicted RBP22.03■■□□□ 1.12
TMEM50B-205ENST00000459909 ZIC5Q96T25 663 aa22.03■■□□□ 1.12
TMEM50B-205ENST00000459909 BCL2L13Q9BXK5 485 aa22.03■■□□□ 1.12
TMEM50B-205ENST00000459909 RTFDC1Q9BY42 306 aaPredicted RBP22.03■■□□□ 1.12
TMEM50B-205ENST00000459909 HIRAP54198 1017 aaPredicted RBP22.02■■□□□ 1.12
TMEM50B-205ENST00000459909 HUNKP57058 714 aa22.02■■□□□ 1.12
TMEM50B-205ENST00000459909 DDX10Q13206 875 aaKnown RBP22.02■■□□□ 1.12
TMEM50B-205ENST00000459909 DCTN1Q14203 1278 aa22.02■■□□□ 1.12
TMEM50B-205ENST00000459909 CFAP53Q96M91 514 aa22.02■■□□□ 1.12
TMEM50B-205ENST00000459909 NTSR2O95665 410 aa22.01■■□□□ 1.11
TMEM50B-205ENST00000459909 TNIP1Q15025 636 aa22.01■■□□□ 1.11
TMEM50B-205ENST00000459909 TTLL7Q6ZT98 887 aa22.01■■□□□ 1.11
TMEM50B-205ENST00000459909 C3orf67Q6ZVT6 689 aa22.01■■□□□ 1.11
TMEM50B-205ENST00000459909 ZNF34Q8IZ26 560 aa22.01■■□□□ 1.11
TMEM50B-205ENST00000459909 NLRP3Q96P20 1036 aa22.01■■□□□ 1.11
TMEM50B-205ENST00000459909 SAGE1Q9NXZ1 904 aa22.01■■□□□ 1.11
TMEM50B-205ENST00000459909 NUDCQ9Y266 331 aa22.01■■□□□ 1.11
TMEM50B-205ENST00000459909 TRPM4Q8TD43 1214 aa22■■□□□ 1.11
TMEM50B-205ENST00000459909 SOX10P56693 466 aa21.99■■□□□ 1.11
TMEM50B-205ENST00000459909 KIAA2012Q0VF49 1180 aa21.99■■□□□ 1.11
TMEM50B-205ENST00000459909 CNGB1Q14028 1251 aaPredicted RBP21.99■■□□□ 1.11
TMEM50B-205ENST00000459909 PPP1R42Q7Z4L9 355 aa21.99■■□□□ 1.11
TMEM50B-205ENST00000459909 ZBTB3Q9H5J0 574 aa21.99■■□□□ 1.11
TMEM50B-205ENST00000459909 RRP7AQ9Y3A4 280 aaKnown RBP21.99■■□□□ 1.11
TMEM50B-205ENST00000459909 RAD17O75943 681 aa21.98■■□□□ 1.11
TMEM50B-205ENST00000459909 PRPF38BQ5VTL8 546 aaKnown RBP21.98■■□□□ 1.11
TMEM50B-205ENST00000459909 DPP8Q6V1X1 898 aaPredicted RBP21.98■■□□□ 1.11
TMEM50B-205ENST00000459909 USP48Q86UV5 1035 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms