RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 SOS1Q07889 1333 aaPredicted RBP12.49□□□□□ -0.41
AMBRA1-202ENST00000458649 PI4KAP2A4QPH2 592 aa12.49□□□□□ -0.41
AMBRA1-202ENST00000458649 PI4KAP1Q8N8J0 262 aa12.49□□□□□ -0.41
AMBRA1-202ENST00000458649 PPP1R12BO60237 982 aaPredicted RBP12.48□□□□□ -0.41
AMBRA1-202ENST00000458649 ALDH1L1O75891 902 aa12.48□□□□□ -0.41
AMBRA1-202ENST00000458649 KIF5BP33176 963 aa12.48□□□□□ -0.41
AMBRA1-202ENST00000458649 ZSCAN30Q86W11 494 aa12.48□□□□□ -0.41
AMBRA1-202ENST00000458649 JAKMIP1Q96N16 626 aaKnown RBP12.48□□□□□ -0.41
AMBRA1-202ENST00000458649 ZC3H12CQ9C0D7 883 aaKnown RBP12.48□□□□□ -0.41
AMBRA1-202ENST00000458649 UBE3BQ7Z3V4 1068 aa12.48□□□□□ -0.41
AMBRA1-202ENST00000458649 SLAIN2Q9P270 581 aa12.48□□□□□ -0.41
AMBRA1-202ENST00000458649 GOLGA6L7A0A1B0GV03 622 aa12.48□□□□□ -0.41
AMBRA1-202ENST00000458649 DZIP3Q86Y13 1208 aaKnown RBP12.48□□□□□ -0.41
AMBRA1-202ENST00000458649 IP6K1Q92551 441 aa12.48□□□□□ -0.41
AMBRA1-202ENST00000458649 SIRT1Q96EB6 747 aa12.48□□□□□ -0.41
AMBRA1-202ENST00000458649 INCENPQ9NQS7 918 aa12.48□□□□□ -0.41
AMBRA1-202ENST00000458649 ZNHIT6Q9NWK9 470 aaKnown RBP12.48□□□□□ -0.41
AMBRA1-202ENST00000458649 CFAP45Q9UL16 551 aa12.48□□□□□ -0.41
AMBRA1-202ENST00000458649 MCM4P33991 863 aa12.48□□□□□ -0.41
AMBRA1-202ENST00000458649 AXDND1Q5T1B0 1012 aaPredicted RBP12.48□□□□□ -0.41
AMBRA1-202ENST00000458649 TMEM87AQ8NBN3 555 aa12.48□□□□□ -0.41
AMBRA1-202ENST00000458649 ANKRD2Q9GZV1 360 aa12.48□□□□□ -0.41
AMBRA1-202ENST00000458649 PTPRTO14522 1441 aa12.48□□□□□ -0.41
AMBRA1-202ENST00000458649 ZNF213O14771 459 aa12.47□□□□□ -0.41
AMBRA1-202ENST00000458649 VAMP4O75379 141 aa12.47□□□□□ -0.41
AMBRA1-202ENST00000458649 MATR3P43243 847 aaKnown RBP eCLIP12.47□□□□□ -0.419e-7■■■■□ 20.5
AMBRA1-202ENST00000458649 KRT85P78386 507 aa12.47□□□□□ -0.41
AMBRA1-202ENST00000458649 FIBPO43427 364 aa12.47□□□□□ -0.41
AMBRA1-202ENST00000458649 PLCG2P16885 1265 aa12.47□□□□□ -0.41
AMBRA1-202ENST00000458649 MTHFSDQ2M296 383 aaKnown RBP12.47□□□□□ -0.41
AMBRA1-202ENST00000458649 RANBP6O60518 1105 aaKnown RBP12.47□□□□□ -0.41
AMBRA1-202ENST00000458649 INSRP06213 1382 aa12.47□□□□□ -0.41
AMBRA1-202ENST00000458649 SMC2O95347 1197 aa12.47□□□□□ -0.41
AMBRA1-202ENST00000458649 SSBP05455 408 aaKnown RBP eCLIP12.47□□□□□ -0.41
AMBRA1-202ENST00000458649 NUCB1Q02818 461 aa12.47□□□□□ -0.41
AMBRA1-202ENST00000458649 CATIPQ7Z7H3 387 aa12.47□□□□□ -0.41
AMBRA1-202ENST00000458649 CABLES1Q8TDN4 633 aa12.47□□□□□ -0.41
AMBRA1-202ENST00000458649 USP21Q9UK80 565 aa12.47□□□□□ -0.41
AMBRA1-202ENST00000458649 TMEM266Q2M3C6 531 aa12.46□□□□□ -0.41
AMBRA1-202ENST00000458649 GPATCH11Q8N954 259 aa12.46□□□□□ -0.41
AMBRA1-202ENST00000458649 FLAD1Q8NFF5 587 aa12.46□□□□□ -0.41
AMBRA1-202ENST00000458649 CCP110O43303 1012 aa12.46□□□□□ -0.41
AMBRA1-202ENST00000458649 EIF3JO75822 258 aaKnown RBP12.46□□□□□ -0.41
AMBRA1-202ENST00000458649 ZFYP08048 801 aaPredicted RBP12.46□□□□□ -0.41
AMBRA1-202ENST00000458649 EDC4Q6P2E9 1401 aaKnown RBP12.46□□□□□ -0.41
AMBRA1-202ENST00000458649 TNNI2P48788 182 aa12.46□□□□□ -0.42
AMBRA1-202ENST00000458649 CBX1P83916 185 aa12.46□□□□□ -0.42
AMBRA1-202ENST00000458649 LARP1BQ659C4 914 aaKnown RBP12.46□□□□□ -0.42
AMBRA1-202ENST00000458649 RBM17Q96I25 401 aaKnown RBP12.46□□□□□ -0.42
AMBRA1-202ENST00000458649 MEIS3Q99687 375 aa12.46□□□□□ -0.42
AMBRA1-202ENST00000458649 CCNL1Q9UK58 526 aaPredicted RBP12.46□□□□□ -0.42
AMBRA1-202ENST00000458649 TTC37Q6PGP7 1564 aa12.46□□□□□ -0.42
AMBRA1-202ENST00000458649 MAP3K19Q56UN5 1328 aa12.46□□□□□ -0.42
AMBRA1-202ENST00000458649 STK3Q13188 491 aa12.46□□□□□ -0.42
AMBRA1-202ENST00000458649 BOLA2Q9H3K6 86 aa12.46□□□□□ -0.42
AMBRA1-202ENST00000458649 SBNO2Q9Y2G9 1366 aa12.45□□□□□ -0.42
AMBRA1-202ENST00000458649 EYA1Q99502 592 aa12.45□□□□□ -0.42
AMBRA1-202ENST00000458649 ATP5J2-PTCD1G3V325 749 aa12.45□□□□□ -0.42
AMBRA1-202ENST00000458649 KIF20AO95235 890 aa12.45□□□□□ -0.42
AMBRA1-202ENST00000458649 RLBP1P12271 317 aa12.45□□□□□ -0.42
AMBRA1-202ENST00000458649 ME1P48163 572 aa12.45□□□□□ -0.42
AMBRA1-202ENST00000458649 TBC1D9Q6ZT07 1266 aa12.45□□□□□ -0.42
AMBRA1-202ENST00000458649 EVI5LQ96CN4 794 aa12.45□□□□□ -0.42
AMBRA1-202ENST00000458649 ECHDC1Q9NTX5 307 aa12.45□□□□□ -0.42
AMBRA1-202ENST00000458649 BAG4O95429 457 aaKnown RBP12.45□□□□□ -0.42
AMBRA1-202ENST00000458649 POTEJP0CG39 1038 aa12.45□□□□□ -0.42
AMBRA1-202ENST00000458649 PARP10Q53GL7 1025 aa12.45□□□□□ -0.42
AMBRA1-202ENST00000458649 TSPYL6Q8N831 410 aa12.45□□□□□ -0.42
AMBRA1-202ENST00000458649 ANKRD44Q8N8A2 993 aa12.45□□□□□ -0.42
AMBRA1-202ENST00000458649 CEP57L1Q8IYX8 460 aa12.45□□□□□ -0.42
AMBRA1-202ENST00000458649 CFAP65Q6ZU64 1925 aaKnown RBP12.44□□□□□ -0.42
AMBRA1-202ENST00000458649 TBC1D2Q9BYX2 928 aa12.44□□□□□ -0.42
AMBRA1-202ENST00000458649 UPF3BQ9BZI7 483 aaKnown RBP12.44□□□□□ -0.42
AMBRA1-202ENST00000458649 TNNQ9UQP3 1299 aa12.44□□□□□ -0.42
AMBRA1-202ENST00000458649 PREX2Q70Z35 1606 aa12.44□□□□□ -0.42
AMBRA1-202ENST00000458649 ANXA1P04083 346 aa12.44□□□□□ -0.42
AMBRA1-202ENST00000458649 XAGE3Q8WTP9 111 aa12.44□□□□□ -0.42
AMBRA1-202ENST00000458649 CCDC8Q9H0W5 538 aaPredicted RBP12.44□□□□□ -0.42
AMBRA1-202ENST00000458649 SLC12A7Q9Y666 1083 aa12.44□□□□□ -0.42
AMBRA1-202ENST00000458649 HOOK2Q96ED9 719 aa12.44□□□□□ -0.42
AMBRA1-202ENST00000458649 GNPATO15228 680 aa12.44□□□□□ -0.42
AMBRA1-202ENST00000458649 CASTP20810 708 aaKnown RBP12.44□□□□□ -0.42
AMBRA1-202ENST00000458649 PDE6BP35913 854 aa12.44□□□□□ -0.42
AMBRA1-202ENST00000458649 TMEM2Q9UHN6 1383 aa12.44□□□□□ -0.42
AMBRA1-202ENST00000458649 ZRSR2Q15696 482 aaKnown RBP12.43□□□□□ -0.42
AMBRA1-202ENST00000458649 TTC22Q5TAA0 569 aa12.43□□□□□ -0.42
AMBRA1-202ENST00000458649 ZNF772Q68DY9 489 aaPredicted RBP12.43□□□□□ -0.42
AMBRA1-202ENST00000458649 SUPT20HQ8NEM7 779 aa12.43□□□□□ -0.42
AMBRA1-202ENST00000458649 TBC1D32Q96NH3 1257 aa12.43□□□□□ -0.42
AMBRA1-202ENST00000458649 MAP3K5Q99683 1374 aa12.43□□□□□ -0.42
AMBRA1-202ENST00000458649 IL15P40933 162 aaPredicted RBP12.43□□□□□ -0.42
AMBRA1-202ENST00000458649 KSR2Q6VAB6 950 aa12.43□□□□□ -0.42
AMBRA1-202ENST00000458649 TRIM5Q9C035 493 aa12.43□□□□□ -0.42
AMBRA1-202ENST00000458649 TSPY26PQ9H489 355 aa12.43□□□□□ -0.42
AMBRA1-202ENST00000458649 YEATS2Q9ULM3 1422 aa12.43□□□□□ -0.42
AMBRA1-202ENST00000458649 MAGI2Q86UL8 1455 aa12.43□□□□□ -0.42
AMBRA1-202ENST00000458649 IL13P35225 146 aa12.43□□□□□ -0.42
AMBRA1-202ENST00000458649 CHPF2Q9P2E5 772 aa12.43□□□□□ -0.42
AMBRA1-202ENST00000458649 KDM5DQ9BY66 1539 aa12.43□□□□□ -0.42
AMBRA1-202ENST00000458649 TSPY2A6NKD2 308 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms