RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 C9orf78Q9NZ63 289 aaPredicted RBP11.14□□□□□ -0.63
CDC42EP3-204ENST00000457889 COL5A3P25940 1745 aaPredicted RBP11.14□□□□□ -0.63
CDC42EP3-204ENST00000457889 A0A087WZG4 1122 aa11.13□□□□□ -0.63
CDC42EP3-204ENST00000457889 TTLL13PA6NNM8 815 aa11.13□□□□□ -0.63
CDC42EP3-204ENST00000457889 NEURL1BA8MQ27 555 aa11.13□□□□□ -0.63
CDC42EP3-204ENST00000457889 TRIM28Q13263 835 aaKnown RBP11.13□□□□□ -0.63
CDC42EP3-204ENST00000457889 MTX1Q13505 466 aa11.13□□□□□ -0.63
CDC42EP3-204ENST00000457889 RC3H1Q5TC82 1133 aaKnown RBP11.13□□□□□ -0.63
CDC42EP3-204ENST00000457889 FAM163AQ96GL9 167 aaPredicted RBP11.13□□□□□ -0.63
CDC42EP3-204ENST00000457889 LY75O60449 1722 aa11.12□□□□□ -0.63
CDC42EP3-204ENST00000457889 MAP3K15Q6ZN16 1313 aa11.12□□□□□ -0.63
CDC42EP3-204ENST00000457889 IGKV5-2P06315 115 aa11.12□□□□□ -0.63
CDC42EP3-204ENST00000457889 TIE1P35590 1138 aa11.12□□□□□ -0.63
CDC42EP3-204ENST00000457889 CRKLP46109 303 aaKnown RBP11.12□□□□□ -0.63
CDC42EP3-204ENST00000457889 NUBP1P53384 320 aa11.12□□□□□ -0.63
CDC42EP3-204ENST00000457889 EIF5P55010 431 aaKnown RBP11.12□□□□□ -0.63
CDC42EP3-204ENST00000457889 GCKRQ14397 625 aa11.12□□□□□ -0.63
CDC42EP3-204ENST00000457889 CCDC191Q8NCU4 936 aa11.12□□□□□ -0.63
CDC42EP3-204ENST00000457889 SLC27A3Q5K4L6 730 aa11.11□□□□□ -0.63
CDC42EP3-204ENST00000457889 GIGYF2Q6Y7W6 1299 aaKnown RBP11.11□□□□□ -0.63
CDC42EP3-204ENST00000457889 SIRT2Q8IXJ6 389 aa11.11□□□□□ -0.63
CDC42EP3-204ENST00000457889 MYD88Q99836 296 aa11.11□□□□□ -0.63
CDC42EP3-204ENST00000457889 DCTPP1Q9H773 170 aa11.11□□□□□ -0.63
CDC42EP3-204ENST00000457889 C1orf115Q9H7X2 142 aa11.11□□□□□ -0.63
CDC42EP3-204ENST00000457889 ZBTB1Q9Y2K1 713 aa11.11□□□□□ -0.63
CDC42EP3-204ENST00000457889 BRWD3Q6RI45 1802 aa11.11□□□□□ -0.63
CDC42EP3-204ENST00000457889 ATP8B2P98198 1209 aa11.1□□□□□ -0.63
CDC42EP3-204ENST00000457889 NUCB1Q02818 461 aa11.1□□□□□ -0.63
CDC42EP3-204ENST00000457889 TCIRG1Q13488 830 aa11.1□□□□□ -0.63
CDC42EP3-204ENST00000457889 ITPK1Q13572 414 aa11.1□□□□□ -0.63
CDC42EP3-204ENST00000457889 HSP90AB4PQ58FF6 505 aa11.1□□□□□ -0.63
CDC42EP3-204ENST00000457889 INTS5Q6P9B9 1019 aaKnown RBP11.1□□□□□ -0.63
CDC42EP3-204ENST00000457889 MAMSTRQ6ZN01 415 aa11.1□□□□□ -0.63
CDC42EP3-204ENST00000457889 TTLL7Q6ZT98 887 aa11.1□□□□□ -0.63
CDC42EP3-204ENST00000457889 CWC25Q9NXE8 425 aaPredicted RBP11.1□□□□□ -0.63
CDC42EP3-204ENST00000457889 ZBTB47Q9UFB7 747 aaPredicted RBP11.1□□□□□ -0.63
CDC42EP3-204ENST00000457889 LRRFIP2Q9Y608 721 aaKnown RBP11.1□□□□□ -0.63
CDC42EP3-204ENST00000457889 NBPF7P0C2Y1 421 aaPredicted RBP11.09□□□□□ -0.63
CDC42EP3-204ENST00000457889 PIP4K2AP48426 406 aaPredicted RBP11.09□□□□□ -0.63
CDC42EP3-204ENST00000457889 CWF19L2Q2TBE0 894 aaKnown RBP11.09□□□□□ -0.63
CDC42EP3-204ENST00000457889 DZIP3Q86Y13 1208 aaKnown RBP11.09□□□□□ -0.63
CDC42EP3-204ENST00000457889 SSH3Q8TE77 659 aa11.09□□□□□ -0.63
CDC42EP3-204ENST00000457889 ISCA1Q9BUE6 129 aa11.09□□□□□ -0.63
CDC42EP3-204ENST00000457889 CCNL1Q9UK58 526 aaPredicted RBP11.09□□□□□ -0.63
CDC42EP3-204ENST00000457889 ZNF652Q9Y2D9 606 aa11.09□□□□□ -0.63
CDC42EP3-204ENST00000457889 PCDHB13Q9Y5F0 798 aa11.09□□□□□ -0.63
CDC42EP3-204ENST00000457889 AFDNP55196 1824 aaKnown RBP11.09□□□□□ -0.63
CDC42EP3-204ENST00000457889 HSP90B1P14625 803 aaKnown RBP11.08□□□□□ -0.64
CDC42EP3-204ENST00000457889 CLEC4GQ6UXB4 293 aa11.08□□□□□ -0.64
CDC42EP3-204ENST00000457889 ZBTB3Q9H5J0 574 aa11.08□□□□□ -0.64
CDC42EP3-204ENST00000457889 SCUBE2Q9NQ36 999 aa11.08□□□□□ -0.64
CDC42EP3-204ENST00000457889 RGPD3A6NKT7 1758 aaPredicted RBP11.08□□□□□ -0.64
CDC42EP3-204ENST00000457889 ANKRD36CQ5JPF3 1778 aa11.08□□□□□ -0.64
CDC42EP3-204ENST00000457889 RGPD4Q7Z3J3 1758 aa11.08□□□□□ -0.64
CDC42EP3-204ENST00000457889 MYH14Q7Z406 1995 aaKnown RBP11.07□□□□□ -0.64
CDC42EP3-204ENST00000457889 H7C1W4 665 aa11.07□□□□□ -0.64
CDC42EP3-204ENST00000457889 RAB11FIP3O75154 756 aa11.07□□□□□ -0.64
CDC42EP3-204ENST00000457889 PARP10Q53GL7 1025 aa11.07□□□□□ -0.64
CDC42EP3-204ENST00000457889 CHD1LQ86WJ1 897 aa11.07□□□□□ -0.64
CDC42EP3-204ENST00000457889 LINC00116Q8NCU8 138 aa11.07□□□□□ -0.64
CDC42EP3-204ENST00000457889 AK7Q96M32 723 aa11.07□□□□□ -0.64
CDC42EP3-204ENST00000457889 PDZRN3Q9UPQ7 1066 aa11.07□□□□□ -0.64
CDC42EP3-204ENST00000457889 ZNF330Q9Y3S2 320 aaPredicted RBP11.07□□□□□ -0.64
CDC42EP3-204ENST00000457889 PLSCR1O15162 318 aa11.06□□□□□ -0.64
CDC42EP3-204ENST00000457889 SRGAP3O43295 1099 aa11.06□□□□□ -0.64
CDC42EP3-204ENST00000457889 RPS6KA4O75676 772 aa11.06□□□□□ -0.64
CDC42EP3-204ENST00000457889 PCCAP05165 728 aaPredicted RBP11.06□□□□□ -0.64
CDC42EP3-204ENST00000457889 RABL6Q3YEC7 729 aaPredicted RBP11.06□□□□□ -0.64
CDC42EP3-204ENST00000457889 FAM182BQ5T319 152 aa11.06□□□□□ -0.64
CDC42EP3-204ENST00000457889 PPP1R42Q7Z4L9 355 aa11.06□□□□□ -0.64
CDC42EP3-204ENST00000457889 IFNL1Q8IU54 200 aa11.06□□□□□ -0.64
CDC42EP3-204ENST00000457889 ERC1Q8IUD2 1116 aa11.06□□□□□ -0.64
CDC42EP3-204ENST00000457889 RGS17Q9UGC6 210 aaPredicted RBP11.06□□□□□ -0.64
CDC42EP3-204ENST00000457889 TAF1LQ8IZX4 1826 aa11.06□□□□□ -0.64
CDC42EP3-204ENST00000457889 CDHR2Q9BYE9 1310 aa11.06□□□□□ -0.64
CDC42EP3-204ENST00000457889 BCORQ6W2J9 1755 aa11.05□□□□□ -0.64
CDC42EP3-204ENST00000457889 SCN7AQ01118 1682 aa11.05□□□□□ -0.64
CDC42EP3-204ENST00000457889 ATP5J2-PTCD1G3V325 749 aa11.05□□□□□ -0.64
CDC42EP3-204ENST00000457889 CAMTA2O94983 1202 aa11.05□□□□□ -0.64
CDC42EP3-204ENST00000457889 SEC24BO95487 1268 aa11.05□□□□□ -0.64
CDC42EP3-204ENST00000457889 C4BP0C0L5 1744 aa11.05□□□□□ -0.64
CDC42EP3-204ENST00000457889 CASP7P55210 303 aa11.05□□□□□ -0.64
CDC42EP3-204ENST00000457889 PTF1AQ7RTS3 328 aa11.05□□□□□ -0.64
CDC42EP3-204ENST00000457889 UBE3BQ7Z3V4 1068 aa11.05□□□□□ -0.64
CDC42EP3-204ENST00000457889 ZBTB38Q8NAP3 1195 aaPredicted RBP11.05□□□□□ -0.64
CDC42EP3-204ENST00000457889 SUCLG2Q96I99 432 aa11.05□□□□□ -0.64
CDC42EP3-204ENST00000457889 PLA2G12BQ9BX93 195 aa11.05□□□□□ -0.64
CDC42EP3-204ENST00000457889 NOP58Q9Y2X3 529 aaKnown RBP11.05□□□□□ -0.64
CDC42EP3-204ENST00000457889 RTCBQ9Y3I0 505 aaKnown RBP11.05□□□□□ -0.64
CDC42EP3-204ENST00000457889 NUP98P52948 1817 aa11.05□□□□□ -0.64
CDC42EP3-204ENST00000457889 PNMA6EA0A0J9YXQ4 647 aa11.04□□□□□ -0.64
CDC42EP3-204ENST00000457889 TRIM37O94972 964 aa11.04□□□□□ -0.64
CDC42EP3-204ENST00000457889 ANKRD45Q5TZF3 282 aa11.04□□□□□ -0.64
CDC42EP3-204ENST00000457889 NLRP10Q86W26 655 aa11.04□□□□□ -0.64
CDC42EP3-204ENST00000457889 ZNF34Q8IZ26 560 aa11.04□□□□□ -0.64
CDC42EP3-204ENST00000457889 LRRCC1Q9C099 1032 aa11.04□□□□□ -0.64
CDC42EP3-204ENST00000457889 BICC1Q9H694 974 aaKnown RBP11.04□□□□□ -0.64
CDC42EP3-204ENST00000457889 GNPATO15228 680 aa11.03□□□□□ -0.64
CDC42EP3-204ENST00000457889 POTEAQ6S8J7 498 aa11.03□□□□□ -0.64
CDC42EP3-204ENST00000457889 KIF1BPQ96EK5 621 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms