RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 ARID4BQ4LE39 1312 aaPredicted RBP5.73□□□□□ -1.49
HMGB3P30-201ENST00000457863 CADPSQ9ULU8 1353 aa5.72□□□□□ -1.49
HMGB3P30-201ENST00000457863 PPP1R15AO75807 674 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P30-201ENST00000457863 CLSTN1O94985 981 aa5.72□□□□□ -1.49
HMGB3P30-201ENST00000457863 KCNQ4P56696 695 aa5.72□□□□□ -1.49
HMGB3P30-201ENST00000457863 TYRO3Q06418 890 aa5.72□□□□□ -1.49
HMGB3P30-201ENST00000457863 KCNA1Q09470 495 aa5.72□□□□□ -1.49
HMGB3P30-201ENST00000457863 SYT9Q86SS6 491 aa5.72□□□□□ -1.49
HMGB3P30-201ENST00000457863 TICAM2Q86XR7 235 aa5.72□□□□□ -1.49
HMGB3P30-201ENST00000457863 GLMNQ92990 594 aa5.72□□□□□ -1.49
HMGB3P30-201ENST00000457863 TRIM11Q96F44 468 aa5.72□□□□□ -1.49
HMGB3P30-201ENST00000457863 ANKIB1Q9P2G1 1089 aa5.72□□□□□ -1.49
HMGB3P30-201ENST00000457863 UNCXA6NJT0 531 aa5.71□□□□□ -1.5
HMGB3P30-201ENST00000457863 K7ELQ4 463 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P30-201ENST00000457863 C21orf2O43822 256 aa5.71□□□□□ -1.5
HMGB3P30-201ENST00000457863 CD163Q86VB7 1156 aa5.71□□□□□ -1.5
HMGB3P30-201ENST00000457863 TSEN2Q8NCE0 465 aaKnown RBP5.71□□□□□ -1.5
HMGB3P30-201ENST00000457863 PSMD1Q99460 953 aa5.71□□□□□ -1.5
HMGB3P30-201ENST00000457863 PHACTR1Q9C0D0 580 aa5.71□□□□□ -1.5
HMGB3P30-201ENST00000457863 NEUROD4Q9HD90 331 aa5.71□□□□□ -1.5
HMGB3P30-201ENST00000457863 MAFBQ9Y5Q3 323 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P30-201ENST00000457863 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P30-201ENST00000457863 ACIN1Q9UKV3 1341 aaKnown RBP5.71□□□□□ -1.5
HMGB3P30-201ENST00000457863 C1QTNF9BB2RNN3 333 aa5.7□□□□□ -1.5
HMGB3P30-201ENST00000457863 SPATA31C1P0DKV0 1188 aa5.7□□□□□ -1.5
HMGB3P30-201ENST00000457863 CHRNA4P43681 627 aa5.7□□□□□ -1.5
HMGB3P30-201ENST00000457863 SPEM2Q0P670 501 aa5.7□□□□□ -1.5
HMGB3P30-201ENST00000457863 SFSWAPQ12872 951 aaKnown RBP5.7□□□□□ -1.5
HMGB3P30-201ENST00000457863 NEUROD1Q13562 356 aa5.7□□□□□ -1.5
HMGB3P30-201ENST00000457863 HIF1AQ16665 826 aa5.7□□□□□ -1.5
HMGB3P30-201ENST00000457863 CCDC27Q2M243 656 aa5.7□□□□□ -1.5
HMGB3P30-201ENST00000457863 GAS2L2Q8NHY3 880 aa5.7□□□□□ -1.5
HMGB3P30-201ENST00000457863 ZNF594Q96JF6 807 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P30-201ENST00000457863 SLC30A3Q99726 388 aa5.7□□□□□ -1.5
HMGB3P30-201ENST00000457863 BRD7Q9NPI1 651 aa5.7□□□□□ -1.5
HMGB3P30-201ENST00000457863 PRDM6Q9NQX0 595 aa5.7□□□□□ -1.5
HMGB3P30-201ENST00000457863 BRPF3Q9ULD4 1205 aa5.7□□□□□ -1.5
HMGB3P30-201ENST00000457863 SFI1A8K8P3 1242 aa5.69□□□□□ -1.5
HMGB3P30-201ENST00000457863 PPP1R12BO60237 982 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P30-201ENST00000457863 BRD1O95696 1058 aa5.69□□□□□ -1.5
HMGB3P30-201ENST00000457863 ALAS2P22557 587 aa5.69□□□□□ -1.5
HMGB3P30-201ENST00000457863 SEC13P55735 322 aa5.69□□□□□ -1.5
HMGB3P30-201ENST00000457863 IER5Q5VY09 327 aa5.69□□□□□ -1.5
HMGB3P30-201ENST00000457863 HSH2DQ96JZ2 352 aa5.69□□□□□ -1.5
HMGB3P30-201ENST00000457863 SUSD3Q96L08 255 aa5.69□□□□□ -1.5
HMGB3P30-201ENST00000457863 C2orf49Q9BVC5 232 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P30-201ENST00000457863 RBM19Q9Y4C8 960 aaKnown RBP5.69□□□□□ -1.5
HMGB3P30-201ENST00000457863 SPDYE3A6NKU9 549 aa5.68□□□□□ -1.5
HMGB3P30-201ENST00000457863 NEFLP07196 543 aa5.68□□□□□ -1.5
HMGB3P30-201ENST00000457863 RASA1P20936 1047 aa5.68□□□□□ -1.5
HMGB3P30-201ENST00000457863 ADH7P40394 386 aa5.68□□□□□ -1.5
HMGB3P30-201ENST00000457863 ALDH16A1Q8IZ83 802 aa5.68□□□□□ -1.5
HMGB3P30-201ENST00000457863 CEP63Q96MT8 703 aa5.68□□□□□ -1.5
HMGB3P30-201ENST00000457863 PLVAPQ9BX97 442 aa5.68□□□□□ -1.5
HMGB3P30-201ENST00000457863 KCNH4Q9UQ05 1017 aa5.68□□□□□ -1.5
HMGB3P30-201ENST00000457863 HCN4Q9Y3Q4 1203 aa5.68□□□□□ -1.5
HMGB3P30-201ENST00000457863 COL9A3Q14050 684 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P30-201ENST00000457863 ZNF280CQ8ND82 737 aa5.67□□□□□ -1.5
HMGB3P30-201ENST00000457863 SPATA32Q96LK8 384 aa5.67□□□□□ -1.5
HMGB3P30-201ENST00000457863 EFCC1Q9HA90 598 aa5.67□□□□□ -1.5
HMGB3P30-201ENST00000457863 TFIP11Q9UBB9 837 aaKnown RBP5.67□□□□□ -1.5
HMGB3P30-201ENST00000457863 STARD13Q9Y3M8 1113 aa5.67□□□□□ -1.5
HMGB3P30-201ENST00000457863 ATAD2Q6PL18 1390 aa5.67□□□□□ -1.5
HMGB3P30-201ENST00000457863 FAM196BA6NMK8 535 aa5.66□□□□□ -1.5
HMGB3P30-201ENST00000457863 M0R082 166 aa5.66□□□□□ -1.5
HMGB3P30-201ENST00000457863 ALBP02768 609 aa5.66□□□□□ -1.5
HMGB3P30-201ENST00000457863 PTK7Q13308 1070 aa5.66□□□□□ -1.5
HMGB3P30-201ENST00000457863 RTN1Q16799 776 aa5.66□□□□□ -1.5
HMGB3P30-201ENST00000457863 CRTC2Q53ET0 693 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P30-201ENST00000457863 BTLAQ7Z6A9 289 aa5.66□□□□□ -1.5
HMGB3P30-201ENST00000457863 ZNF417Q8TAU3 575 aa5.66□□□□□ -1.5
HMGB3P30-201ENST00000457863 ZNF587Q96SQ5 575 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P30-201ENST00000457863 PPP1R12CQ9BZL4 782 aa5.66□□□□□ -1.5
HMGB3P30-201ENST00000457863 RBM47A0AV96 593 aaKnown RBP5.65□□□□□ -1.5
HMGB3P30-201ENST00000457863 TGFBR3LH3BV60 316 aa5.65□□□□□ -1.5
HMGB3P30-201ENST00000457863 SMARCA5O60264 1052 aaPredicted RBP5.65□□□□□ -1.5
HMGB3P30-201ENST00000457863 FURINP09958 794 aa5.65□□□□□ -1.5
HMGB3P30-201ENST00000457863 NID1P14543 1247 aa5.65□□□□□ -1.5
HMGB3P30-201ENST00000457863 IGFBP4P22692 258 aa5.65□□□□□ -1.5
HMGB3P30-201ENST00000457863 PRRT3Q5FWE3 981 aa5.65□□□□□ -1.5
HMGB3P30-201ENST00000457863 LARP1Q6PKG0 1096 aaKnown RBP5.65□□□□□ -1.5
HMGB3P30-201ENST00000457863 TMED8Q6PL24 325 aaPredicted RBP5.65□□□□□ -1.5
HMGB3P30-201ENST00000457863 C20orf204Q6ZNR8 217 aa5.65□□□□□ -1.5
HMGB3P30-201ENST00000457863 RAB44Q7Z6P3 723 aaPredicted RBP5.65□□□□□ -1.5
HMGB3P30-201ENST00000457863 ANKRD13AQ8IZ07 590 aa5.65□□□□□ -1.5
HMGB3P30-201ENST00000457863 MICALL1Q8N3F8 863 aa5.65□□□□□ -1.5
HMGB3P30-201ENST00000457863 SCG3Q8WXD2 468 aaKnown RBP5.65□□□□□ -1.5
HMGB3P30-201ENST00000457863 USP17L15C9J2P7 530 aa5.64□□□□□ -1.51
HMGB3P30-201ENST00000457863 USP17L10C9JJH3 530 aa5.64□□□□□ -1.51
HMGB3P30-201ENST00000457863 USP17L13C9JLJ4 530 aa5.64□□□□□ -1.51
HMGB3P30-201ENST00000457863 USP17L12C9JPN9 530 aa5.64□□□□□ -1.51
HMGB3P30-201ENST00000457863 USP17L11C9JVI0 530 aa5.64□□□□□ -1.51
HMGB3P30-201ENST00000457863 USP17L21D6R901 530 aa5.64□□□□□ -1.51
HMGB3P30-201ENST00000457863 USP17L18D6R9N7 530 aa5.64□□□□□ -1.51
HMGB3P30-201ENST00000457863 USP17L22D6RA61 530 aa5.64□□□□□ -1.51
HMGB3P30-201ENST00000457863 USP17L17D6RBQ6 530 aa5.64□□□□□ -1.51
HMGB3P30-201ENST00000457863 USP17L19D6RCP7 530 aa5.64□□□□□ -1.51
HMGB3P30-201ENST00000457863 USP17L20D6RJB6 530 aa5.64□□□□□ -1.51
HMGB3P30-201ENST00000457863 NCLP19338 710 aaKnown RBP5.64□□□□□ -1.51
HMGB3P30-201ENST00000457863 USP17L24Q0WX57 530 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms