RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 ALDH1L1O75891 902 aa10.99□□□□□ -0.65
RIF1-208ENST00000457745 GCKRQ14397 625 aa10.99□□□□□ -0.65
RIF1-208ENST00000457745 SYNE4Q8N205 404 aa10.99□□□□□ -0.65
RIF1-208ENST00000457745 ISCA1Q9BUE6 129 aa10.99□□□□□ -0.65
RIF1-208ENST00000457745 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.99□□□□□ -0.65
RIF1-208ENST00000457745 UTYO14607 1347 aa10.99□□□□□ -0.65
RIF1-208ENST00000457745 STARD3NLO95772 234 aa10.98□□□□□ -0.65
RIF1-208ENST00000457745 RXRBP28702 533 aa10.98□□□□□ -0.65
RIF1-208ENST00000457745 AAMPQ13685 434 aa10.98□□□□□ -0.65
RIF1-208ENST00000457745 OTUD7AQ8TE49 926 aaPredicted RBP10.98□□□□□ -0.65
RIF1-208ENST00000457745 SMARCC1Q92922 1105 aaPredicted RBP10.98□□□□□ -0.65
RIF1-208ENST00000457745 BCL11BQ9C0K0 894 aaPredicted RBP10.98□□□□□ -0.65
RIF1-208ENST00000457745 MAP3K15Q6ZN16 1313 aa10.98□□□□□ -0.65
RIF1-208ENST00000457745 UBN2Q6ZU65 1347 aa10.98□□□□□ -0.65
RIF1-208ENST00000457745 CASZ1Q86V15 1759 aa10.98□□□□□ -0.65
RIF1-208ENST00000457745 GRM8O00222 908 aa10.97□□□□□ -0.65
RIF1-208ENST00000457745 SMARCA5O60264 1052 aaPredicted RBP10.97□□□□□ -0.65
RIF1-208ENST00000457745 CAMTA2O94983 1202 aa10.97□□□□□ -0.65
RIF1-208ENST00000457745 DDX58O95786 925 aaKnown RBP10.97□□□□□ -0.65
RIF1-208ENST00000457745 GNAI2P04899 355 aa10.97□□□□□ -0.65
RIF1-208ENST00000457745 UBTFL1P0CB47 393 aaPredicted RBP10.97□□□□□ -0.65
RIF1-208ENST00000457745 GPTP24298 496 aa10.97□□□□□ -0.65
RIF1-208ENST00000457745 RGS3P49796 1198 aa10.97□□□□□ -0.65
RIF1-208ENST00000457745 ATP8B2P98198 1209 aa10.97□□□□□ -0.65
RIF1-208ENST00000457745 RTL5Q5HYW3 569 aaPredicted RBP10.97□□□□□ -0.65
RIF1-208ENST00000457745 TEX13AQ9BXU3 409 aaPredicted RBP10.97□□□□□ -0.65
RIF1-208ENST00000457745 RWDD1Q9H446 243 aaPredicted RBP10.97□□□□□ -0.65
RIF1-208ENST00000457745 BCL2L12Q9HB09 334 aa10.97□□□□□ -0.65
RIF1-208ENST00000457745 SRP68Q9UHB9 627 aaKnown RBP10.97□□□□□ -0.65
RIF1-208ENST00000457745 CCNL1Q9UK58 526 aaPredicted RBP10.97□□□□□ -0.65
RIF1-208ENST00000457745 CNTNAP4Q9C0A0 1308 aa10.97□□□□□ -0.65
RIF1-208ENST00000457745 COL15A1P39059 1388 aa10.97□□□□□ -0.65
RIF1-208ENST00000457745 DDX60Q8IY21 1712 aaKnown RBP10.96□□□□□ -0.65
RIF1-208ENST00000457745 IL6STP40189 918 aaPredicted RBP10.96□□□□□ -0.65
RIF1-208ENST00000457745 FAM196AQ6ZSG2 479 aa10.96□□□□□ -0.65
RIF1-208ENST00000457745 PPP1R42Q7Z4L9 355 aa10.96□□□□□ -0.65
RIF1-208ENST00000457745 ILDR1Q86SU0 546 aaPredicted RBP10.96□□□□□ -0.65
RIF1-208ENST00000457745 DZIP3Q86Y13 1208 aaKnown RBP10.96□□□□□ -0.65
RIF1-208ENST00000457745 BICC1Q9H694 974 aaKnown RBP10.96□□□□□ -0.65
RIF1-208ENST00000457745 TSHZ2Q9NRE2 1034 aa10.96□□□□□ -0.65
RIF1-208ENST00000457745 COL24A1Q17RW2 1714 aa10.95□□□□□ -0.66
RIF1-208ENST00000457745 IBTKQ9P2D0 1353 aaPredicted RBP10.95□□□□□ -0.66
RIF1-208ENST00000457745 H7C1W4 665 aa10.95□□□□□ -0.66
RIF1-208ENST00000457745 GNAI3P08754 354 aa10.95□□□□□ -0.66
RIF1-208ENST00000457745 TCIRG1Q13488 830 aa10.95□□□□□ -0.66
RIF1-208ENST00000457745 GIGYF2Q6Y7W6 1299 aaKnown RBP10.95□□□□□ -0.66
RIF1-208ENST00000457745 UBE3BQ7Z3V4 1068 aa10.95□□□□□ -0.66
RIF1-208ENST00000457745 C16orf71Q8IYS4 520 aaPredicted RBP10.95□□□□□ -0.66
RIF1-208ENST00000457745 KLHDC4Q8TBB5 520 aa10.95□□□□□ -0.66
RIF1-208ENST00000457745 LNPKQ9C0E8 428 aa10.95□□□□□ -0.66
RIF1-208ENST00000457745 DCTPP1Q9H773 170 aa10.95□□□□□ -0.66
RIF1-208ENST00000457745 PA2G4Q9UQ80 394 aaKnown RBP10.95□□□□□ -0.66
RIF1-208ENST00000457745 EXOC6BQ9Y2D4 811 aa10.95□□□□□ -0.66
RIF1-208ENST00000457745 APBB1O00213 710 aa10.94□□□□□ -0.66
RIF1-208ENST00000457745 RFX5P48382 616 aaPredicted RBP10.94□□□□□ -0.66
RIF1-208ENST00000457745 FOXO4P98177 505 aa10.94□□□□□ -0.66
RIF1-208ENST00000457745 NUCB1Q02818 461 aa10.94□□□□□ -0.66
RIF1-208ENST00000457745 ZNF827Q17R98 1081 aa10.94□□□□□ -0.66
RIF1-208ENST00000457745 RPAP2Q8IXW5 612 aaPredicted RBP10.94□□□□□ -0.66
RIF1-208ENST00000457745 ZNF34Q8IZ26 560 aa10.94□□□□□ -0.66
RIF1-208ENST00000457745 SSH3Q8TE77 659 aa10.94□□□□□ -0.66
RIF1-208ENST00000457745 ARXQ96QS3 562 aa10.94□□□□□ -0.66
RIF1-208ENST00000457745 CHMP4AQ9BY43 222 aa10.94□□□□□ -0.66
RIF1-208ENST00000457745 LAMB2P55268 1798 aa10.93□□□□□ -0.66
RIF1-208ENST00000457745 TNRC6CQ9HCJ0 1690 aaKnown RBP10.93□□□□□ -0.66
RIF1-208ENST00000457745 A0A087WZG4 1122 aa10.93□□□□□ -0.66
RIF1-208ENST00000457745 GNPATO15228 680 aa10.93□□□□□ -0.66
RIF1-208ENST00000457745 MTX1Q13505 466 aa10.93□□□□□ -0.66
RIF1-208ENST00000457745 KIF6Q6ZMV9 814 aa10.93□□□□□ -0.66
RIF1-208ENST00000457745 NLRP10Q86W26 655 aa10.93□□□□□ -0.66
RIF1-208ENST00000457745 DCBLD2Q96PD2 775 aa10.93□□□□□ -0.66
RIF1-208ENST00000457745 C9orf78Q9NZ63 289 aaPredicted RBP10.93□□□□□ -0.66
RIF1-208ENST00000457745 EP400Q96L91 3159 aa10.92□□□□□ -0.66
RIF1-208ENST00000457745 RPS6KA4O75676 772 aa10.92□□□□□ -0.66
RIF1-208ENST00000457745 TXNRD1Q16881 649 aa10.92□□□□□ -0.66
RIF1-208ENST00000457745 SUSD4Q5VX71 490 aa10.92□□□□□ -0.66
RIF1-208ENST00000457745 FAM89AQ96GI7 184 aa10.92□□□□□ -0.66
RIF1-208ENST00000457745 CWC25Q9NXE8 425 aaPredicted RBP10.92□□□□□ -0.66
RIF1-208ENST00000457745 TAF1P21675 1872 aa10.91□□□□□ -0.66
RIF1-208ENST00000457745 RGPD3A6NKT7 1758 aaPredicted RBP10.91□□□□□ -0.66
RIF1-208ENST00000457745 RGPD4Q7Z3J3 1758 aa10.91□□□□□ -0.66
RIF1-208ENST00000457745 SRGAP3O43295 1099 aa10.91□□□□□ -0.66
RIF1-208ENST00000457745 PHF14O94880 888 aa10.91□□□□□ -0.66
RIF1-208ENST00000457745 NEXNQ0ZGT2 675 aa10.91□□□□□ -0.66
RIF1-208ENST00000457745 RABL6Q3YEC7 729 aaPredicted RBP10.91□□□□□ -0.66
RIF1-208ENST00000457745 RC3H1Q5TC82 1133 aaKnown RBP10.91□□□□□ -0.66
RIF1-208ENST00000457745 ANKRD45Q5TZF3 282 aa10.91□□□□□ -0.66
RIF1-208ENST00000457745 USPL1Q5W0Q7 1092 aa10.91□□□□□ -0.66
RIF1-208ENST00000457745 C3orf67Q6ZVT6 689 aa10.91□□□□□ -0.66
RIF1-208ENST00000457745 CHD1LQ86WJ1 897 aa10.91□□□□□ -0.66
RIF1-208ENST00000457745 IFNLR1Q8IU57 520 aaPredicted RBP10.91□□□□□ -0.66
RIF1-208ENST00000457745 ARHGEF1Q92888 912 aaKnown RBP10.91□□□□□ -0.66
RIF1-208ENST00000457745 BCL11AQ9H165 835 aa10.91□□□□□ -0.66
RIF1-208ENST00000457745 MYH3P11055 1940 aa10.91□□□□□ -0.66
RIF1-208ENST00000457745 ABCC12Q96J65 1359 aa10.9□□□□□ -0.66
RIF1-208ENST00000457745 SALL3Q9BXA9 1300 aa10.9□□□□□ -0.66
RIF1-208ENST00000457745 FAM177BA6PVY3 158 aa10.9□□□□□ -0.66
RIF1-208ENST00000457745 ERVV-1B6SEH8 477 aa10.9□□□□□ -0.66
RIF1-208ENST00000457745 TRIM28Q13263 835 aaKnown RBP10.9□□□□□ -0.66
RIF1-208ENST00000457745 TSHZ3Q63HK5 1081 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms