RNA–Protein interactions for RNA: ENST00000456608.1

CASC4P1-201, Transcript of cancer susceptibility 4 pseudogene 1, humanhuman

BASIC

Gene CASC4P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4P1-201ENST00000456608 SRGAP3O43295 1099 aa16.21■□□□□ 0.19
CASC4P1-201ENST00000456608 TRIM37O94972 964 aa16.21■□□□□ 0.19
CASC4P1-201ENST00000456608 CAMTA2O94983 1202 aa16.21■□□□□ 0.19
CASC4P1-201ENST00000456608 ARXQ96QS3 562 aa16.21■□□□□ 0.19
CASC4P1-201ENST00000456608 C4AP0C0L4 1744 aa16.21■□□□□ 0.19
CASC4P1-201ENST00000456608 RPS6KA4O75676 772 aa16.2■□□□□ 0.18
CASC4P1-201ENST00000456608 RABL6Q3YEC7 729 aaPredicted RBP16.2■□□□□ 0.18
CASC4P1-201ENST00000456608 EPHA10Q5JZY3 1008 aa16.2■□□□□ 0.18
CASC4P1-201ENST00000456608 JARID2Q92833 1246 aaPredicted RBP16.2■□□□□ 0.18
CASC4P1-201ENST00000456608 PCCAP05165 728 aaPredicted RBP16.19■□□□□ 0.18
CASC4P1-201ENST00000456608 NLRP10Q86W26 655 aa16.19■□□□□ 0.18
CASC4P1-201ENST00000456608 ZNF34Q8IZ26 560 aa16.19■□□□□ 0.18
CASC4P1-201ENST00000456608 EXOC6BQ9Y2D4 811 aa16.19■□□□□ 0.18
CASC4P1-201ENST00000456608 NOP58Q9Y2X3 529 aaKnown RBP16.19■□□□□ 0.18
CASC4P1-201ENST00000456608 RGPD3A6NKT7 1758 aaPredicted RBP16.19■□□□□ 0.18
CASC4P1-201ENST00000456608 RGPD4Q7Z3J3 1758 aa16.19■□□□□ 0.18
CASC4P1-201ENST00000456608 RGL2O15211 777 aa16.19■□□□□ 0.18
CASC4P1-201ENST00000456608 LAMB2P55268 1798 aa16.18■□□□□ 0.18
CASC4P1-201ENST00000456608 RAB11FIP3O75154 756 aa16.18■□□□□ 0.18
CASC4P1-201ENST00000456608 GPTP24298 496 aa16.18■□□□□ 0.18
CASC4P1-201ENST00000456608 FOXO4P98177 505 aa16.18■□□□□ 0.18
CASC4P1-201ENST00000456608 SLC27A3Q5K4L6 730 aa16.18■□□□□ 0.18
CASC4P1-201ENST00000456608 LRRC4BQ9NT99 713 aa16.18■□□□□ 0.18
CASC4P1-201ENST00000456608 UBN2Q6ZU65 1347 aa16.17■□□□□ 0.18
CASC4P1-201ENST00000456608 CDHR2Q9BYE9 1310 aa16.17■□□□□ 0.18
CASC4P1-201ENST00000456608 SMARCA5O60264 1052 aaPredicted RBP16.17■□□□□ 0.18
CASC4P1-201ENST00000456608 SURF6O75683 361 aaKnown RBP16.17■□□□□ 0.18
CASC4P1-201ENST00000456608 ZBTB38Q8NAP3 1195 aaPredicted RBP16.17■□□□□ 0.18
CASC4P1-201ENST00000456608 PLA2G12BQ9BX93 195 aa16.17■□□□□ 0.18
CASC4P1-201ENST00000456608 ZBTB47Q9UFB7 747 aaPredicted RBP16.17■□□□□ 0.18
CASC4P1-201ENST00000456608 COL24A1Q17RW2 1714 aa16.16■□□□□ 0.18
CASC4P1-201ENST00000456608 DDX60Q8IY21 1712 aaKnown RBP16.16■□□□□ 0.18
CASC4P1-201ENST00000456608 APBB1O00213 710 aa16.16■□□□□ 0.18
CASC4P1-201ENST00000456608 GNPATO15228 680 aa16.16■□□□□ 0.18
CASC4P1-201ENST00000456608 RFX5P48382 616 aaPredicted RBP16.16■□□□□ 0.18
CASC4P1-201ENST00000456608 HSP90AB4PQ58FF6 505 aa16.16■□□□□ 0.18
CASC4P1-201ENST00000456608 CLEC4GQ6UXB4 293 aa16.16■□□□□ 0.18
CASC4P1-201ENST00000456608 LRRCC1Q9C099 1032 aa16.16■□□□□ 0.18
CASC4P1-201ENST00000456608 TUBGCP6Q96RT7 1819 aa16.15■□□□□ 0.18
CASC4P1-201ENST00000456608 RTL5Q5HYW3 569 aaPredicted RBP16.15■□□□□ 0.18
CASC4P1-201ENST00000456608 PLEKHM2Q8IWE5 1019 aa16.15■□□□□ 0.18
CASC4P1-201ENST00000456608 C16orf71Q8IYS4 520 aaPredicted RBP16.15■□□□□ 0.18
CASC4P1-201ENST00000456608 BACH2Q9BYV9 841 aa16.15■□□□□ 0.18
CASC4P1-201ENST00000456608 NARFQ9UHQ1 456 aa16.15■□□□□ 0.18
CASC4P1-201ENST00000456608 ZNF652Q9Y2D9 606 aa16.15■□□□□ 0.18
CASC4P1-201ENST00000456608 RTCBQ9Y3I0 505 aaKnown RBP16.15■□□□□ 0.18
CASC4P1-201ENST00000456608 CASZ1Q86V15 1759 aa16.15■□□□□ 0.18
CASC4P1-201ENST00000456608 PLSCR1O15162 318 aa16.14■□□□□ 0.17
CASC4P1-201ENST00000456608 FAM161AQ3B820 660 aa16.14■□□□□ 0.17
CASC4P1-201ENST00000456608 PARP10Q53GL7 1025 aa16.14■□□□□ 0.17
CASC4P1-201ENST00000456608 LMBR1LQ6UX01 489 aa16.14■□□□□ 0.17
CASC4P1-201ENST00000456608 PROM2Q8N271 834 aa16.14■□□□□ 0.17
CASC4P1-201ENST00000456608 RHPN1Q8TCX5 695 aa16.14■□□□□ 0.17
CASC4P1-201ENST00000456608 FAM89AQ96GI7 184 aa16.14■□□□□ 0.17
CASC4P1-201ENST00000456608 COPRSQ9NQ92 184 aa16.14■□□□□ 0.17
CASC4P1-201ENST00000456608 PA2G4Q9UQ80 394 aaKnown RBP16.14■□□□□ 0.17
CASC4P1-201ENST00000456608 TXNRD1Q16881 649 aa16.13■□□□□ 0.17
CASC4P1-201ENST00000456608 C8orf34Q49A92 452 aa16.13■□□□□ 0.17
CASC4P1-201ENST00000456608 SMIM5Q71RC9 77 aa16.13■□□□□ 0.17
CASC4P1-201ENST00000456608 AMIGO3Q86WK7 504 aa16.13■□□□□ 0.17
CASC4P1-201ENST00000456608 KIF1BPQ96EK5 621 aa16.13■□□□□ 0.17
CASC4P1-201ENST00000456608 AK7Q96M32 723 aa16.13■□□□□ 0.17
CASC4P1-201ENST00000456608 BCL2L12Q9HB09 334 aa16.13■□□□□ 0.17
CASC4P1-201ENST00000456608 SALL3Q9BXA9 1300 aa16.12■□□□□ 0.17
CASC4P1-201ENST00000456608 HMGB2P26583 209 aaKnown RBP16.12■□□□□ 0.17
CASC4P1-201ENST00000456608 PTPN12Q05209 780 aaKnown RBP16.12■□□□□ 0.17
CASC4P1-201ENST00000456608 SUSD4Q5VX71 490 aa16.12■□□□□ 0.17
CASC4P1-201ENST00000456608 ERC1Q8IUD2 1116 aa16.12■□□□□ 0.17
CASC4P1-201ENST00000456608 OTUD7AQ8TE49 926 aaPredicted RBP16.12■□□□□ 0.17
CASC4P1-201ENST00000456608 ARHGEF1Q92888 912 aaKnown RBP16.12■□□□□ 0.17
CASC4P1-201ENST00000456608 TRMT112Q9UI30 125 aaKnown RBP16.12■□□□□ 0.17
CASC4P1-201ENST00000456608 APBA3O96018 575 aa16.11■□□□□ 0.17
CASC4P1-201ENST00000456608 CSF1RP07333 972 aa16.11■□□□□ 0.17
CASC4P1-201ENST00000456608 SYNE4Q8N205 404 aa16.11■□□□□ 0.17
CASC4P1-201ENST00000456608 NIP7Q9Y221 180 aaKnown RBP eCLIP16.11■□□□□ 0.17
CASC4P1-201ENST00000456608 IRS4O14654 1257 aaPredicted RBP16.1■□□□□ 0.17
CASC4P1-201ENST00000456608 NTSR2O95665 410 aa16.1■□□□□ 0.17
CASC4P1-201ENST00000456608 G3BP1Q13283 466 aaKnown RBP eCLIP16.1■□□□□ 0.17
CASC4P1-201ENST00000456608 OS9Q13438 667 aaPredicted RBP16.1■□□□□ 0.17
CASC4P1-201ENST00000456608 BMP2KLQ5H9B9 411 aa16.1■□□□□ 0.17
CASC4P1-201ENST00000456608 TRAPPC3LQ5T215 181 aa16.1■□□□□ 0.17
CASC4P1-201ENST00000456608 USPL1Q5W0Q7 1092 aa16.1■□□□□ 0.17
CASC4P1-201ENST00000456608 UTP14AQ9BVJ6 771 aaKnown RBP16.1■□□□□ 0.17
CASC4P1-201ENST00000456608 OSBPL3Q9H4L5 887 aa16.1■□□□□ 0.17
CASC4P1-201ENST00000456608 SRP68Q9UHB9 627 aaKnown RBP16.1■□□□□ 0.17
CASC4P1-201ENST00000456608 SH3TC1Q8TE82 1336 aa16.09■□□□□ 0.17
CASC4P1-201ENST00000456608 USP42Q9H9J4 1324 aaKnown RBP16.09■□□□□ 0.17
CASC4P1-201ENST00000456608 ZPR1O75312 459 aa16.09■□□□□ 0.17
CASC4P1-201ENST00000456608 SASH1O94885 1247 aa16.09■□□□□ 0.17
CASC4P1-201ENST00000456608 KLHDC4Q8TBB5 520 aa16.09■□□□□ 0.17
CASC4P1-201ENST00000456608 IL1RAPL2Q9NP60 686 aa16.09■□□□□ 0.17
CASC4P1-201ENST00000456608 CHMP3Q9Y3E7 222 aa16.09■□□□□ 0.17
CASC4P1-201ENST00000456608 PDE8AO60658 829 aa16.08■□□□□ 0.16
CASC4P1-201ENST00000456608 PDE1AP54750 535 aa16.08■□□□□ 0.16
CASC4P1-201ENST00000456608 TTC22Q5TAA0 569 aa16.08■□□□□ 0.16
CASC4P1-201ENST00000456608 TBC1D9BQ66K14 1250 aa16.08■□□□□ 0.16
CASC4P1-201ENST00000456608 SSFA2P28290 1259 aa16.07■□□□□ 0.16
CASC4P1-201ENST00000456608 RFC4P35249 363 aa16.07■□□□□ 0.16
CASC4P1-201ENST00000456608 CTSWP56202 376 aa16.07■□□□□ 0.16
CASC4P1-201ENST00000456608 TTLL11Q8NHH1 800 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms