RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 MAP3K5Q99683 1374 aa12.18□□□□□ -0.46
CHCHD4P3-201ENST00000455954 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.18□□□□□ -0.46
CHCHD4P3-201ENST00000455954 GNPATO15228 680 aa12.18□□□□□ -0.46
CHCHD4P3-201ENST00000455954 PHF14O94880 888 aa12.18□□□□□ -0.46
CHCHD4P3-201ENST00000455954 RC3H1Q5TC82 1133 aaKnown RBP12.18□□□□□ -0.46
CHCHD4P3-201ENST00000455954 IL17RAQ96F46 866 aa12.18□□□□□ -0.46
CHCHD4P3-201ENST00000455954 SYT17Q9BSW7 474 aa12.18□□□□□ -0.46
CHCHD4P3-201ENST00000455954 FHDC1Q9C0D6 1143 aaPredicted RBP12.18□□□□□ -0.46
CHCHD4P3-201ENST00000455954 MRC1P22897 1456 aa12.18□□□□□ -0.46
CHCHD4P3-201ENST00000455954 ADAMTS7Q9UKP4 1686 aa12.17□□□□□ -0.46
CHCHD4P3-201ENST00000455954 DCAF8L1A6NGE4 600 aa12.17□□□□□ -0.46
CHCHD4P3-201ENST00000455954 TWISTNBQ3B726 338 aaPredicted RBP12.17□□□□□ -0.46
CHCHD4P3-201ENST00000455954 MCTP1Q6DN14 999 aa12.17□□□□□ -0.46
CHCHD4P3-201ENST00000455954 AMIGO3Q86WK7 504 aa12.17□□□□□ -0.46
CHCHD4P3-201ENST00000455954 IL17REQ8NFR9 667 aa12.17□□□□□ -0.46
CHCHD4P3-201ENST00000455954 OSBPL3Q9H4L5 887 aa12.17□□□□□ -0.46
CHCHD4P3-201ENST00000455954 RTCBQ9Y3I0 505 aaKnown RBP12.17□□□□□ -0.46
CHCHD4P3-201ENST00000455954 COL24A1Q17RW2 1714 aa12.17□□□□□ -0.46
CHCHD4P3-201ENST00000455954 PTPRCP08575 1304 aa12.16□□□□□ -0.46
CHCHD4P3-201ENST00000455954 CNTNAP4Q9C0A0 1308 aa12.16□□□□□ -0.46
CHCHD4P3-201ENST00000455954 TEFQ10587 303 aa12.16□□□□□ -0.46
CHCHD4P3-201ENST00000455954 SLC39A6Q13433 755 aa12.16□□□□□ -0.46
CHCHD4P3-201ENST00000455954 TRAPPC3LQ5T215 181 aa12.16□□□□□ -0.46
CHCHD4P3-201ENST00000455954 CAVIN1Q6NZI2 390 aaKnown RBP12.16□□□□□ -0.46
CHCHD4P3-201ENST00000455954 SMIM5Q71RC9 77 aa12.16□□□□□ -0.46
CHCHD4P3-201ENST00000455954 SYAP1Q96A49 352 aaPredicted RBP12.16□□□□□ -0.46
CHCHD4P3-201ENST00000455954 UBR3Q6ZT12 1888 aa12.16□□□□□ -0.46
CHCHD4P3-201ENST00000455954 RPS6KA4O75676 772 aa12.15□□□□□ -0.46
CHCHD4P3-201ENST00000455954 ADRA2BP18089 450 aa12.15□□□□□ -0.46
CHCHD4P3-201ENST00000455954 ANAPC15P60006 121 aa12.15□□□□□ -0.46
CHCHD4P3-201ENST00000455954 MSL1Q68DK7 614 aa12.15□□□□□ -0.46
CHCHD4P3-201ENST00000455954 SASS6Q6UVJ0 657 aa12.15□□□□□ -0.46
CHCHD4P3-201ENST00000455954 INTS4Q96HW7 963 aaKnown RBP12.15□□□□□ -0.46
CHCHD4P3-201ENST00000455954 RBSNQ9H1K0 784 aa12.15□□□□□ -0.46
CHCHD4P3-201ENST00000455954 MBIPQ9NS73 344 aa12.15□□□□□ -0.46
CHCHD4P3-201ENST00000455954 ERC2O15083 957 aa12.14□□□□□ -0.47
CHCHD4P3-201ENST00000455954 CUL4AQ13619 759 aa12.14□□□□□ -0.47
CHCHD4P3-201ENST00000455954 UVSSAQ2YD98 709 aa12.14□□□□□ -0.47
CHCHD4P3-201ENST00000455954 TTC5Q8N0Z6 440 aa12.14□□□□□ -0.47
CHCHD4P3-201ENST00000455954 FAM184AQ8NB25 1140 aa12.14□□□□□ -0.47
CHCHD4P3-201ENST00000455954 RTF1Q92541 710 aaKnown RBP12.14□□□□□ -0.47
CHCHD4P3-201ENST00000455954 COL5A3P25940 1745 aaPredicted RBP12.14□□□□□ -0.47
CHCHD4P3-201ENST00000455954 HTATSF1O43719 755 aaKnown RBP12.13□□□□□ -0.47
CHCHD4P3-201ENST00000455954 HMMRO75330 724 aa12.13□□□□□ -0.47
CHCHD4P3-201ENST00000455954 MCCP23508 829 aa12.13□□□□□ -0.47
CHCHD4P3-201ENST00000455954 CRKLP46109 303 aaKnown RBP12.13□□□□□ -0.47
CHCHD4P3-201ENST00000455954 DNAJC10Q8IXB1 793 aa12.13□□□□□ -0.47
CHCHD4P3-201ENST00000455954 ARHGEF1Q92888 912 aaKnown RBP12.13□□□□□ -0.47
CHCHD4P3-201ENST00000455954 FOXD4L1Q9NU39 408 aa12.13□□□□□ -0.47
CHCHD4P3-201ENST00000455954 CEMIPQ8WUJ3 1361 aa12.13□□□□□ -0.47
CHCHD4P3-201ENST00000455954 CICQ96RK0 1608 aaPredicted RBP12.12□□□□□ -0.47
CHCHD4P3-201ENST00000455954 SRCAPQ6ZRS2 3230 aa12.12□□□□□ -0.47
CHCHD4P3-201ENST00000455954 RFC4P35249 363 aa12.12□□□□□ -0.47
CHCHD4P3-201ENST00000455954 ZNF790Q6PG37 636 aa12.12□□□□□ -0.47
CHCHD4P3-201ENST00000455954 GPT2Q8TD30 523 aa12.12□□□□□ -0.47
CHCHD4P3-201ENST00000455954 C1orf115Q9H7X2 142 aa12.12□□□□□ -0.47
CHCHD4P3-201ENST00000455954 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.12□□□□□ -0.47
CHCHD4P3-201ENST00000455954 KCPQ6ZWJ8 1503 aa12.11□□□□□ -0.47
CHCHD4P3-201ENST00000455954 TJP1Q07157 1748 aa12.11□□□□□ -0.47
CHCHD4P3-201ENST00000455954 BRD1O95696 1058 aa12.11□□□□□ -0.47
CHCHD4P3-201ENST00000455954 CYP19A1P11511 503 aaPredicted RBP12.11□□□□□ -0.47
CHCHD4P3-201ENST00000455954 SDSP20132 328 aa12.11□□□□□ -0.47
CHCHD4P3-201ENST00000455954 CEP85Q6P2H3 762 aa12.11□□□□□ -0.47
CHCHD4P3-201ENST00000455954 INTS5Q6P9B9 1019 aaKnown RBP12.11□□□□□ -0.47
CHCHD4P3-201ENST00000455954 MCM10Q7L590 875 aa12.11□□□□□ -0.47
CHCHD4P3-201ENST00000455954 SMAP1Q8IYB5 467 aaPredicted RBP12.11□□□□□ -0.47
CHCHD4P3-201ENST00000455954 NLGN1Q8N2Q7 840 aa12.11□□□□□ -0.47
CHCHD4P3-201ENST00000455954 TSPYL6Q8N831 410 aa12.11□□□□□ -0.47
CHCHD4P3-201ENST00000455954 CCDC87Q9NVE4 849 aa12.11□□□□□ -0.47
CHCHD4P3-201ENST00000455954 AOX1Q06278 1338 aa12.11□□□□□ -0.47
CHCHD4P3-201ENST00000455954 UQCRHLA0A096LP55 91 aa12.1□□□□□ -0.47
CHCHD4P3-201ENST00000455954 BTBD11A6QL63 1104 aa12.1□□□□□ -0.47
CHCHD4P3-201ENST00000455954 PRPF40AO75400 957 aaKnown RBP12.1□□□□□ -0.47
CHCHD4P3-201ENST00000455954 UQCRHP07919 91 aa12.1□□□□□ -0.47
CHCHD4P3-201ENST00000455954 ZNF496Q96IT1 587 aaPredicted RBP12.1□□□□□ -0.47
CHCHD4P3-201ENST00000455954 TEX13AQ9BXU3 409 aaPredicted RBP12.1□□□□□ -0.47
CHCHD4P3-201ENST00000455954 TSPY26PQ9H489 355 aa12.1□□□□□ -0.47
CHCHD4P3-201ENST00000455954 ZDHHC9Q9Y397 364 aa12.1□□□□□ -0.47
CHCHD4P3-201ENST00000455954 R3HCC1Q9Y3T6 440 aaKnown RBP12.1□□□□□ -0.47
CHCHD4P3-201ENST00000455954 CD2APQ9Y5K6 639 aa12.1□□□□□ -0.47
CHCHD4P3-201ENST00000455954 LETM1O95202 739 aaPredicted RBP12.09□□□□□ -0.47
CHCHD4P3-201ENST00000455954 STARD3NLO95772 234 aa12.09□□□□□ -0.47
CHCHD4P3-201ENST00000455954 NCLP19338 710 aaKnown RBP12.09□□□□□ -0.47
CHCHD4P3-201ENST00000455954 HMGN5P82970 282 aaKnown RBP12.09□□□□□ -0.47
CHCHD4P3-201ENST00000455954 KIAA2012Q0VF49 1180 aa12.09□□□□□ -0.47
CHCHD4P3-201ENST00000455954 DCTN1Q14203 1278 aa12.09□□□□□ -0.47
CHCHD4P3-201ENST00000455954 TMEM87AQ8NBN3 555 aa12.09□□□□□ -0.47
CHCHD4P3-201ENST00000455954 PRIMPOLQ96LW4 560 aa12.09□□□□□ -0.47
CHCHD4P3-201ENST00000455954 FMNL2Q96PY5 1086 aa12.09□□□□□ -0.47
CHCHD4P3-201ENST00000455954 TMEM63CQ9P1W3 806 aa12.09□□□□□ -0.47
CHCHD4P3-201ENST00000455954 SIPA1L3O60292 1781 aaPredicted RBP12.09□□□□□ -0.47
CHCHD4P3-201ENST00000455954 UBR2Q8IWV8 1755 aa12.09□□□□□ -0.47
CHCHD4P3-201ENST00000455954 MYH14Q7Z406 1995 aaKnown RBP12.09□□□□□ -0.47
CHCHD4P3-201ENST00000455954 PXDNLA1KZ92 1463 aa12.08□□□□□ -0.47
CHCHD4P3-201ENST00000455954 HEG1Q9ULI3 1381 aa12.08□□□□□ -0.48
CHCHD4P3-201ENST00000455954 MMP10P09238 476 aa12.08□□□□□ -0.48
CHCHD4P3-201ENST00000455954 GYS1P13807 737 aa12.08□□□□□ -0.48
CHCHD4P3-201ENST00000455954 C8orf58Q8NAV2 365 aa12.08□□□□□ -0.48
CHCHD4P3-201ENST00000455954 NLGN2Q8NFZ4 835 aa12.08□□□□□ -0.48
CHCHD4P3-201ENST00000455954 SOS1Q07889 1333 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms