RNA–Protein interactions for RNA: ENST00000455586.6

VSIG4-204, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSIG4, Length 2,190 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-204ENST00000455586 SEPT12Q8IYM1 358 aa11.4□□□□□ -0.59
VSIG4-204ENST00000455586 RHPN1Q8TCX5 695 aa11.4□□□□□ -0.59
VSIG4-204ENST00000455586 CHMP3Q9Y3E7 222 aa11.4□□□□□ -0.59
VSIG4-204ENST00000455586 AFDNP55196 1824 aaKnown RBP11.39□□□□□ -0.59
VSIG4-204ENST00000455586 KIF6Q6ZMV9 814 aa11.39□□□□□ -0.59
VSIG4-204ENST00000455586 SNX21Q969T3 373 aa11.39□□□□□ -0.59
VSIG4-204ENST00000455586 FAM89AQ96GI7 184 aa11.39□□□□□ -0.59
VSIG4-204ENST00000455586 CWC25Q9NXE8 425 aaPredicted RBP11.39□□□□□ -0.59
VSIG4-204ENST00000455586 FAM177BA6PVY3 158 aa11.38□□□□□ -0.59
VSIG4-204ENST00000455586 REC8O95072 547 aa11.38□□□□□ -0.59
VSIG4-204ENST00000455586 MAP4K4O95819 1239 aaPredicted RBP11.38□□□□□ -0.59
VSIG4-204ENST00000455586 TCIRG1Q13488 830 aa11.38□□□□□ -0.59
VSIG4-204ENST00000455586 ERC1Q8IUD2 1116 aa11.38□□□□□ -0.59
VSIG4-204ENST00000455586 TRPC5Q9UL62 973 aaPredicted RBP11.38□□□□□ -0.59
VSIG4-204ENST00000455586 H7C1W4 665 aa11.38□□□□□ -0.59
VSIG4-204ENST00000455586 LMBR1LQ6UX01 489 aa11.38□□□□□ -0.59
VSIG4-204ENST00000455586 DZIP3Q86Y13 1208 aaKnown RBP11.38□□□□□ -0.59
VSIG4-204ENST00000455586 NUP188Q5SRE5 1749 aa11.38□□□□□ -0.59
VSIG4-204ENST00000455586 MAP3K15Q6ZN16 1313 aa11.38□□□□□ -0.59
VSIG4-204ENST00000455586 TJP1Q07157 1748 aa11.37□□□□□ -0.59
VSIG4-204ENST00000455586 ERC2O15083 957 aa11.37□□□□□ -0.59
VSIG4-204ENST00000455586 LINC00116Q8NCU8 138 aa11.37□□□□□ -0.59
VSIG4-204ENST00000455586 KIF2CQ99661 725 aa11.37□□□□□ -0.59
VSIG4-204ENST00000455586 ISCA1Q9BUE6 129 aa11.37□□□□□ -0.59
VSIG4-204ENST00000455586 CCDC87Q9NVE4 849 aa11.37□□□□□ -0.59
VSIG4-204ENST00000455586 SASH1O94885 1247 aa11.37□□□□□ -0.59
VSIG4-204ENST00000455586 FOXO4P98177 505 aa11.37□□□□□ -0.59
VSIG4-204ENST00000455586 ANTXR1Q9H6X2 564 aa11.37□□□□□ -0.59
VSIG4-204ENST00000455586 COL15A1P39059 1388 aa11.37□□□□□ -0.59
VSIG4-204ENST00000455586 EIF5P55010 431 aaKnown RBP11.36□□□□□ -0.59
VSIG4-204ENST00000455586 AK9Q5TCS8 1911 aa11.36□□□□□ -0.59
VSIG4-204ENST00000455586 GIGYF2Q6Y7W6 1299 aaKnown RBP11.36□□□□□ -0.59
VSIG4-204ENST00000455586 CCDC191Q8NCU4 936 aa11.36□□□□□ -0.59
VSIG4-204ENST00000455586 ZNF594Q96JF6 807 aaPredicted RBP11.36□□□□□ -0.59
VSIG4-204ENST00000455586 USP26Q9BXU7 913 aa11.36□□□□□ -0.59
VSIG4-204ENST00000455586 SLKQ9H2G2 1235 aaPredicted RBP11.36□□□□□ -0.59
VSIG4-204ENST00000455586 ATRNO75882 1429 aa11.36□□□□□ -0.59
VSIG4-204ENST00000455586 USP42Q9H9J4 1324 aaKnown RBP11.36□□□□□ -0.59
VSIG4-204ENST00000455586 TRIM6-TRIM34B2RNG4 842 aa11.35□□□□□ -0.59
VSIG4-204ENST00000455586 IL6STP40189 918 aaPredicted RBP11.35□□□□□ -0.59
VSIG4-204ENST00000455586 RFX5P48382 616 aaPredicted RBP11.35□□□□□ -0.59
VSIG4-204ENST00000455586 PTPN12Q05209 780 aaKnown RBP11.35□□□□□ -0.59
VSIG4-204ENST00000455586 NFKBIBQ15653 356 aa11.35□□□□□ -0.59
VSIG4-204ENST00000455586 CLASRPQ8N2M8 674 aaKnown RBP11.35□□□□□ -0.59
VSIG4-204ENST00000455586 MYH14Q7Z406 1995 aaKnown RBP11.35□□□□□ -0.59
VSIG4-204ENST00000455586 TTC41PQ6P2S7 1318 aa11.35□□□□□ -0.59
VSIG4-204ENST00000455586 AMIGO3Q86WK7 504 aa11.35□□□□□ -0.59
VSIG4-204ENST00000455586 CCDC8Q9H0W5 538 aaPredicted RBP11.35□□□□□ -0.59
VSIG4-204ENST00000455586 TLR7Q9NYK1 1049 aaKnown RBP11.35□□□□□ -0.59
VSIG4-204ENST00000455586 UBN2Q6ZU65 1347 aa11.34□□□□□ -0.59
VSIG4-204ENST00000455586 G3BP1Q13283 466 aaKnown RBP eCLIP11.34□□□□□ -0.59
VSIG4-204ENST00000455586 RABEP1Q15276 862 aa11.34□□□□□ -0.59
VSIG4-204ENST00000455586 RABL6Q3YEC7 729 aaPredicted RBP11.34□□□□□ -0.59
VSIG4-204ENST00000455586 NLRP10Q86W26 655 aa11.34□□□□□ -0.59
VSIG4-204ENST00000455586 PI4K2BQ8TCG2 481 aa11.34□□□□□ -0.59
VSIG4-204ENST00000455586 RILPL2Q969X0 211 aa11.34□□□□□ -0.59
VSIG4-204ENST00000455586 GPATCH3Q96I76 525 aa11.34□□□□□ -0.59
VSIG4-204ENST00000455586 THSD7AQ9UPZ6 1657 aa11.34□□□□□ -0.59
VSIG4-204ENST00000455586 ONECUT3O60422 494 aaPredicted RBP11.34□□□□□ -0.59
VSIG4-204ENST00000455586 SMARCC1Q92922 1105 aaPredicted RBP11.34□□□□□ -0.59
VSIG4-204ENST00000455586 EAF2Q96CJ1 260 aaPredicted RBP11.34□□□□□ -0.59
VSIG4-204ENST00000455586 ESYT1Q9BSJ8 1104 aa11.34□□□□□ -0.59
VSIG4-204ENST00000455586 CHMLP26374 656 aa11.33□□□□□ -0.6
VSIG4-204ENST00000455586 AACSQ86V21 672 aa11.33□□□□□ -0.6
VSIG4-204ENST00000455586 GLRX3O76003 335 aaKnown RBP11.33□□□□□ -0.6
VSIG4-204ENST00000455586 TFCP2Q12800 502 aa11.33□□□□□ -0.6
VSIG4-204ENST00000455586 PUS3Q9BZE2 481 aaKnown RBP11.33□□□□□ -0.6
VSIG4-204ENST00000455586 TRMT112Q9UI30 125 aaKnown RBP11.33□□□□□ -0.6
VSIG4-204ENST00000455586 GOLGB1Q14789 3259 aaKnown RBP11.32□□□□□ -0.6
VSIG4-204ENST00000455586 CAMTA2O94983 1202 aa11.32□□□□□ -0.6
VSIG4-204ENST00000455586 IFIT2P09913 472 aaKnown RBP11.32□□□□□ -0.6
VSIG4-204ENST00000455586 LRRC24Q50LG9 513 aa11.32□□□□□ -0.6
VSIG4-204ENST00000455586 CNTROBQ8N137 903 aa11.32□□□□□ -0.6
VSIG4-204ENST00000455586 CCNL1Q9UK58 526 aaPredicted RBP11.32□□□□□ -0.6
VSIG4-204ENST00000455586 K7ELQ4 463 aaPredicted RBP11.31□□□□□ -0.6
VSIG4-204ENST00000455586 EPB41L2O43491 1005 aaKnown RBP11.31□□□□□ -0.6
VSIG4-204ENST00000455586 SUSD4Q5VX71 490 aa11.31□□□□□ -0.6
VSIG4-204ENST00000455586 BICDL1Q6ZP65 573 aa11.31□□□□□ -0.6
VSIG4-204ENST00000455586 ZBTB38Q8NAP3 1195 aaPredicted RBP11.31□□□□□ -0.6
VSIG4-204ENST00000455586 COPRSQ9NQ92 184 aa11.31□□□□□ -0.6
VSIG4-204ENST00000455586 ECHDC1Q9NTX5 307 aa11.31□□□□□ -0.6
VSIG4-204ENST00000455586 TRIM37O94972 964 aa11.31□□□□□ -0.6
VSIG4-204ENST00000455586 PCCAP05165 728 aaPredicted RBP11.31□□□□□ -0.6
VSIG4-204ENST00000455586 HCLS1P14317 486 aaPredicted RBP11.31□□□□□ -0.6
VSIG4-204ENST00000455586 TRIM28Q13263 835 aaKnown RBP11.31□□□□□ -0.6
VSIG4-204ENST00000455586 CHMP5Q9NZZ3 219 aa11.31□□□□□ -0.6
VSIG4-204ENST00000455586 SRP68Q9UHB9 627 aaKnown RBP11.31□□□□□ -0.6
VSIG4-204ENST00000455586 NDUFB9Q9Y6M9 179 aa11.31□□□□□ -0.6
VSIG4-204ENST00000455586 PHF14O94880 888 aa11.3□□□□□ -0.6
VSIG4-204ENST00000455586 MCCP23508 829 aa11.3□□□□□ -0.6
VSIG4-204ENST00000455586 ZNF34Q8IZ26 560 aa11.3□□□□□ -0.6
VSIG4-204ENST00000455586 SPRYD3Q8NCJ5 442 aa11.3□□□□□ -0.6
VSIG4-204ENST00000455586 IL25Q9H293 177 aa11.3□□□□□ -0.6
VSIG4-204ENST00000455586 LRRC4BQ9NT99 713 aa11.3□□□□□ -0.6
VSIG4-204ENST00000455586 BTAF1O14981 1849 aa11.3□□□□□ -0.6
VSIG4-204ENST00000455586 ERVV-1B6SEH8 477 aa11.3□□□□□ -0.6
VSIG4-204ENST00000455586 IRS4O14654 1257 aaPredicted RBP11.3□□□□□ -0.6
VSIG4-204ENST00000455586 GNPATO15228 680 aa11.3□□□□□ -0.6
VSIG4-204ENST00000455586 ATG9AQ7Z3C6 839 aa11.3□□□□□ -0.6
VSIG4-204ENST00000455586 KRT27Q7Z3Y8 459 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms