RNA–Protein interactions for RNA: ENST00000455313.6

PDXDC1-204, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-204ENST00000455313 PDE4AP27815 886 aa20.79■□□□□ 0.92
PDXDC1-204ENST00000455313 SMIM5Q71RC9 77 aa20.79■□□□□ 0.92
PDXDC1-204ENST00000455313 UBN2Q6ZU65 1347 aa20.79■□□□□ 0.92
PDXDC1-204ENST00000455313 C4AP0C0L4 1744 aa20.78■□□□□ 0.92
PDXDC1-204ENST00000455313 AMIGO3Q86WK7 504 aa20.78■□□□□ 0.92
PDXDC1-204ENST00000455313 ZNF34Q8IZ26 560 aa20.78■□□□□ 0.92
PDXDC1-204ENST00000455313 RTCBQ9Y3I0 505 aaKnown RBP20.78■□□□□ 0.92
PDXDC1-204ENST00000455313 UBR3Q6ZT12 1888 aa20.78■□□□□ 0.92
PDXDC1-204ENST00000455313 APBB1O00213 710 aa20.77■□□□□ 0.92
PDXDC1-204ENST00000455313 TXNRD1Q16881 649 aa20.77■□□□□ 0.92
PDXDC1-204ENST00000455313 RABL6Q3YEC7 729 aaPredicted RBP20.77■□□□□ 0.92
PDXDC1-204ENST00000455313 AK7Q96M32 723 aa20.77■□□□□ 0.92
PDXDC1-204ENST00000455313 PLSCR1O15162 318 aa20.76■□□□□ 0.91
PDXDC1-204ENST00000455313 APBA3O96018 575 aa20.76■□□□□ 0.91
PDXDC1-204ENST00000455313 PCCAP05165 728 aaPredicted RBP20.76■□□□□ 0.91
PDXDC1-204ENST00000455313 PROM2Q8N271 834 aa20.76■□□□□ 0.91
PDXDC1-204ENST00000455313 ZBTB38Q8NAP3 1195 aaPredicted RBP20.76■□□□□ 0.91
PDXDC1-204ENST00000455313 FAM89AQ96GI7 184 aa20.76■□□□□ 0.91
PDXDC1-204ENST00000455313 ZNF652Q9Y2D9 606 aa20.76■□□□□ 0.91
PDXDC1-204ENST00000455313 RGPD3A6NKT7 1758 aaPredicted RBP20.75■□□□□ 0.91
PDXDC1-204ENST00000455313 RGPD4Q7Z3J3 1758 aa20.75■□□□□ 0.91
PDXDC1-204ENST00000455313 SURF6O75683 361 aaKnown RBP20.75■□□□□ 0.91
PDXDC1-204ENST00000455313 FOXO4P98177 505 aa20.75■□□□□ 0.91
PDXDC1-204ENST00000455313 CLEC4GQ6UXB4 293 aa20.74■□□□□ 0.91
PDXDC1-204ENST00000455313 NARFQ9UHQ1 456 aa20.74■□□□□ 0.91
PDXDC1-204ENST00000455313 SMARCA5O60264 1052 aaPredicted RBP20.73■□□□□ 0.91
PDXDC1-204ENST00000455313 ZBTB47Q9UFB7 747 aaPredicted RBP20.73■□□□□ 0.91
PDXDC1-204ENST00000455313 RGL2O15211 777 aa20.73■□□□□ 0.91
PDXDC1-204ENST00000455313 LMBR1LQ6UX01 489 aa20.73■□□□□ 0.91
PDXDC1-204ENST00000455313 TRMT112Q9UI30 125 aaKnown RBP20.73■□□□□ 0.91
PDXDC1-204ENST00000455313 PA2G4Q9UQ80 394 aaKnown RBP20.73■□□□□ 0.91
PDXDC1-204ENST00000455313 NIP7Q9Y221 180 aaKnown RBP eCLIP20.73■□□□□ 0.91
PDXDC1-204ENST00000455313 CDHR2Q9BYE9 1310 aa20.72■□□□□ 0.91
PDXDC1-204ENST00000455313 PHF14O94880 888 aa20.72■□□□□ 0.91
PDXDC1-204ENST00000455313 ARHGEF1Q92888 912 aaKnown RBP20.72■□□□□ 0.91
PDXDC1-204ENST00000455313 LRRCC1Q9C099 1032 aa20.72■□□□□ 0.91
PDXDC1-204ENST00000455313 SRP68Q9UHB9 627 aaKnown RBP20.72■□□□□ 0.91
PDXDC1-204ENST00000455313 NOP58Q9Y2X3 529 aaKnown RBP20.72■□□□□ 0.91
PDXDC1-204ENST00000455313 MYH3P11055 1940 aa20.72■□□□□ 0.91
PDXDC1-204ENST00000455313 PARP10Q53GL7 1025 aa20.72■□□□□ 0.91
PDXDC1-204ENST00000455313 USPL1Q5W0Q7 1092 aa20.72■□□□□ 0.91
PDXDC1-204ENST00000455313 SYNE4Q8N205 404 aa20.72■□□□□ 0.91
PDXDC1-204ENST00000455313 BCL2L12Q9HB09 334 aa20.72■□□□□ 0.91
PDXDC1-204ENST00000455313 BCL11AQ9H165 835 aa20.71■□□□□ 0.91
PDXDC1-204ENST00000455313 SUSD4Q5VX71 490 aa20.7■□□□□ 0.91
PDXDC1-204ENST00000455313 PLA2G12BQ9BX93 195 aa20.7■□□□□ 0.91
PDXDC1-204ENST00000455313 RAB11FIP3O75154 756 aa20.7■□□□□ 0.9
PDXDC1-204ENST00000455313 ZPR1O75312 459 aa20.7■□□□□ 0.9
PDXDC1-204ENST00000455313 ADRA2BP18089 450 aa20.7■□□□□ 0.9
PDXDC1-204ENST00000455313 HSP90AB4PQ58FF6 505 aa20.7■□□□□ 0.9
PDXDC1-204ENST00000455313 TRAPPC3LQ5T215 181 aa20.7■□□□□ 0.9
PDXDC1-204ENST00000455313 USP42Q9H9J4 1324 aaKnown RBP20.7■□□□□ 0.9
PDXDC1-204ENST00000455313 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.69■□□□□ 0.9
PDXDC1-204ENST00000455313 RFX5P48382 616 aaPredicted RBP20.69■□□□□ 0.9
PDXDC1-204ENST00000455313 KLHDC4Q8TBB5 520 aa20.69■□□□□ 0.9
PDXDC1-204ENST00000455313 RFC4P35249 363 aa20.69■□□□□ 0.9
PDXDC1-204ENST00000455313 ILDR1Q86SU0 546 aaPredicted RBP20.69■□□□□ 0.9
PDXDC1-204ENST00000455313 C16orf71Q8IYS4 520 aaPredicted RBP20.69■□□□□ 0.9
PDXDC1-204ENST00000455313 CHMP3Q9Y3E7 222 aa20.69■□□□□ 0.9
PDXDC1-204ENST00000455313 COL24A1Q17RW2 1714 aa20.68■□□□□ 0.9
PDXDC1-204ENST00000455313 FAM177BA6PVY3 158 aa20.68■□□□□ 0.9
PDXDC1-204ENST00000455313 IRS4O14654 1257 aaPredicted RBP20.68■□□□□ 0.9
PDXDC1-204ENST00000455313 HMGB2P26583 209 aaKnown RBP20.68■□□□□ 0.9
PDXDC1-204ENST00000455313 RHPN1Q8TCX5 695 aa20.68■□□□□ 0.9
PDXDC1-204ENST00000455313 UTP14AQ9BVJ6 771 aaKnown RBP20.68■□□□□ 0.9
PDXDC1-204ENST00000455313 LAMB2P55268 1798 aa20.68■□□□□ 0.9
PDXDC1-204ENST00000455313 NTSR2O95665 410 aa20.68■□□□□ 0.9
PDXDC1-204ENST00000455313 PTPN12Q05209 780 aaKnown RBP20.68■□□□□ 0.9
PDXDC1-204ENST00000455313 OS9Q13438 667 aaPredicted RBP20.68■□□□□ 0.9
PDXDC1-204ENST00000455313 TBC1D9BQ66K14 1250 aa20.68■□□□□ 0.9
PDXDC1-204ENST00000455313 OTUD7AQ8TE49 926 aaPredicted RBP20.68■□□□□ 0.9
PDXDC1-204ENST00000455313 KIF1BPQ96EK5 621 aa20.68■□□□□ 0.9
PDXDC1-204ENST00000455313 COPRSQ9NQ92 184 aa20.68■□□□□ 0.9
PDXDC1-204ENST00000455313 SH3TC1Q8TE82 1336 aa20.67■□□□□ 0.9
PDXDC1-204ENST00000455313 DDX60Q8IY21 1712 aaKnown RBP20.67■□□□□ 0.9
PDXDC1-204ENST00000455313 SSFA2P28290 1259 aa20.67■□□□□ 0.9
PDXDC1-204ENST00000455313 SIL1Q9H173 461 aa20.67■□□□□ 0.9
PDXDC1-204ENST00000455313 PLEKHM2Q8IWE5 1019 aa20.66■□□□□ 0.9
PDXDC1-204ENST00000455313 IL1RAPL2Q9NP60 686 aa20.66■□□□□ 0.9
PDXDC1-204ENST00000455313 TUBGCP6Q96RT7 1819 aa20.66■□□□□ 0.9
PDXDC1-204ENST00000455313 CTSWP56202 376 aa20.65■□□□□ 0.9
PDXDC1-204ENST00000455313 BICDL1Q6ZP65 573 aa20.65■□□□□ 0.9
PDXDC1-204ENST00000455313 ERC1Q8IUD2 1116 aa20.65■□□□□ 0.9
PDXDC1-204ENST00000455313 CSF1RP07333 972 aa20.65■□□□□ 0.9
PDXDC1-204ENST00000455313 ZNF827Q17R98 1081 aa20.65■□□□□ 0.9
PDXDC1-204ENST00000455313 FAM161AQ3B820 660 aa20.65■□□□□ 0.9
PDXDC1-204ENST00000455313 PDE8AO60658 829 aa20.64■□□□□ 0.89
PDXDC1-204ENST00000455313 G3BP1Q13283 466 aaKnown RBP eCLIP20.64■□□□□ 0.892e-11■□□□□ 8.4
PDXDC1-204ENST00000455313 NUTM1Q86Y26 1132 aa20.63■□□□□ 0.89
PDXDC1-204ENST00000455313 TTLL11Q8NHH1 800 aa20.63■□□□□ 0.89
PDXDC1-204ENST00000455313 AKT1S1Q96B36 256 aa20.63■□□□□ 0.89
PDXDC1-204ENST00000455313 SALL3Q9BXA9 1300 aa20.63■□□□□ 0.89
PDXDC1-204ENST00000455313 SASH1O94885 1247 aa20.63■□□□□ 0.89
PDXDC1-204ENST00000455313 CCDC85AQ96PX6 553 aaPredicted RBP20.63■□□□□ 0.89
PDXDC1-204ENST00000455313 HCLS1P14317 486 aaPredicted RBP20.62■□□□□ 0.89
PDXDC1-204ENST00000455313 C8orf34Q49A92 452 aa20.62■□□□□ 0.89
PDXDC1-204ENST00000455313 SETDB2Q96T68 719 aa20.62■□□□□ 0.89
PDXDC1-204ENST00000455313 CCDC57Q2TAC2 916 aa20.62■□□□□ 0.89
PDXDC1-204ENST00000455313 BACH2Q9BYV9 841 aa20.62■□□□□ 0.89
PDXDC1-204ENST00000455313 TFCP2L1Q9NZI6 479 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms