RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 TSHZ3Q63HK5 1081 aa11.37□□□□□ -0.59
LINC01940-201ENST00000455228 SYT10Q6XYQ8 523 aa11.37□□□□□ -0.59
LINC01940-201ENST00000455228 ETAA1Q9NY74 926 aa11.37□□□□□ -0.59
LINC01940-201ENST00000455228 CDC42BPGQ6DT37 1551 aa11.37□□□□□ -0.59
LINC01940-201ENST00000455228 EIF3JO75822 258 aaKnown RBP11.37□□□□□ -0.59
LINC01940-201ENST00000455228 PHF8Q9UPP1 1060 aa11.37□□□□□ -0.59
LINC01940-201ENST00000455228 EXOC6BQ9Y2D4 811 aa11.37□□□□□ -0.59
LINC01940-201ENST00000455228 FBXO31Q5XUX0 539 aaPredicted RBP11.36□□□□□ -0.59
LINC01940-201ENST00000455228 ATP10DQ9P241 1426 aa11.36□□□□□ -0.59
LINC01940-201ENST00000455228 RBM6P78332 1123 aaKnown RBP11.36□□□□□ -0.59
LINC01940-201ENST00000455228 CCDC30Q5VVM6 783 aa11.36□□□□□ -0.59
LINC01940-201ENST00000455228 MAP2P11137 1827 aaKnown RBP11.36□□□□□ -0.59
LINC01940-201ENST00000455228 SLC5A9Q2M3M2 681 aa11.36□□□□□ -0.59
LINC01940-201ENST00000455228 LARP6Q9BRS8 491 aaKnown RBP11.36□□□□□ -0.59
LINC01940-201ENST00000455228 GDPD2Q9HCC8 539 aa11.36□□□□□ -0.59
LINC01940-201ENST00000455228 KIF20BQ96Q89 1820 aa11.36□□□□□ -0.59
LINC01940-201ENST00000455228 SIGLEC1Q9BZZ2 1709 aa11.35□□□□□ -0.59
LINC01940-201ENST00000455228 ARHGEF40Q8TER5 1519 aa11.35□□□□□ -0.59
LINC01940-201ENST00000455228 BRD1O95696 1058 aa11.35□□□□□ -0.59
LINC01940-201ENST00000455228 CCT2P78371 535 aaKnown RBP11.35□□□□□ -0.59
LINC01940-201ENST00000455228 GRIK3Q13003 919 aa11.35□□□□□ -0.59
LINC01940-201ENST00000455228 ZNF397Q8NF99 534 aaPredicted RBP11.35□□□□□ -0.59
LINC01940-201ENST00000455228 SNRNP27Q8WVK2 155 aaKnown RBP11.35□□□□□ -0.59
LINC01940-201ENST00000455228 DEF6Q9H4E7 631 aa11.35□□□□□ -0.59
LINC01940-201ENST00000455228 ZBTB12Q9Y330 459 aaPredicted RBP11.35□□□□□ -0.59
LINC01940-201ENST00000455228 F6X3S4 739 aa11.35□□□□□ -0.59
LINC01940-201ENST00000455228 UPF3BQ9BZI7 483 aaKnown RBP11.35□□□□□ -0.59
LINC01940-201ENST00000455228 TBC1D2BQ9UPU7 963 aa11.35□□□□□ -0.59
LINC01940-201ENST00000455228 PIK3C2BO00750 1634 aa11.35□□□□□ -0.59
LINC01940-201ENST00000455228 SCP2P22307 547 aa11.34□□□□□ -0.59
LINC01940-201ENST00000455228 ESYT1Q9BSJ8 1104 aa11.34□□□□□ -0.59
LINC01940-201ENST00000455228 CHL1O00533 1208 aa11.34□□□□□ -0.59
LINC01940-201ENST00000455228 GNAI2P04899 355 aa11.34□□□□□ -0.59
LINC01940-201ENST00000455228 MAP2K2P36507 400 aa11.34□□□□□ -0.59
LINC01940-201ENST00000455228 LRRCC1Q9C099 1032 aa11.34□□□□□ -0.59
LINC01940-201ENST00000455228 MIS18AQ9NYP9 233 aa11.34□□□□□ -0.59
LINC01940-201ENST00000455228 EDC4Q6P2E9 1401 aaKnown RBP11.34□□□□□ -0.59
LINC01940-201ENST00000455228 ATP7BP35670 1465 aa11.34□□□□□ -0.59
LINC01940-201ENST00000455228 CCT4P50991 539 aaKnown RBP11.34□□□□□ -0.59
LINC01940-201ENST00000455228 TTC31Q49AM3 519 aaPredicted RBP11.34□□□□□ -0.59
LINC01940-201ENST00000455228 MMS22LQ6ZRQ5 1243 aa11.34□□□□□ -0.59
LINC01940-201ENST00000455228 RTF1Q92541 710 aaKnown RBP11.34□□□□□ -0.59
LINC01940-201ENST00000455228 LCMT1Q9UIC8 334 aa11.34□□□□□ -0.59
LINC01940-201ENST00000455228 CDK12Q9NYV4 1490 aaPredicted RBP11.34□□□□□ -0.59
LINC01940-201ENST00000455228 WASLO00401 505 aaPredicted RBP11.33□□□□□ -0.6
LINC01940-201ENST00000455228 MX1P20591 662 aa11.33□□□□□ -0.6
LINC01940-201ENST00000455228 PDIA5Q14554 519 aa11.33□□□□□ -0.6
LINC01940-201ENST00000455228 FBXO18Q8NFZ0 1043 aa11.33□□□□□ -0.6
LINC01940-201ENST00000455228 KIAA1524Q8TCG1 905 aa11.33□□□□□ -0.6
LINC01940-201ENST00000455228 KDM4CQ9H3R0 1056 aa11.33□□□□□ -0.6
LINC01940-201ENST00000455228 V9GYY5 206 aaPredicted RBP11.33□□□□□ -0.6
LINC01940-201ENST00000455228 TPM3P06753 285 aa11.33□□□□□ -0.6
LINC01940-201ENST00000455228 INTS4Q96HW7 963 aaKnown RBP11.33□□□□□ -0.6
LINC01940-201ENST00000455228 STK31Q9BXU1 1019 aa11.33□□□□□ -0.6
LINC01940-201ENST00000455228 RANBP17Q9H2T7 1088 aaKnown RBP11.33□□□□□ -0.6
LINC01940-201ENST00000455228 OSBPL3Q9H4L5 887 aa11.33□□□□□ -0.6
LINC01940-201ENST00000455228 PALD1Q9ULE6 856 aa11.33□□□□□ -0.6
LINC01940-201ENST00000455228 KNDC1Q76NI1 1749 aa11.33□□□□□ -0.6
LINC01940-201ENST00000455228 GOLGA5Q8TBA6 731 aa11.33□□□□□ -0.6
LINC01940-201ENST00000455228 NUDT16Q96DE0 195 aaKnown RBP11.33□□□□□ -0.6
LINC01940-201ENST00000455228 TSPYL4Q9UJ04 414 aa11.33□□□□□ -0.6
LINC01940-201ENST00000455228 WDR33Q9C0J8 1336 aaKnown RBP11.33□□□□□ -0.6
LINC01940-201ENST00000455228 SMTNL1A8MU46 457 aa11.32□□□□□ -0.6
LINC01940-201ENST00000455228 TRIM66O15016 1216 aa11.32□□□□□ -0.6
LINC01940-201ENST00000455228 AMOTQ4VCS5 1084 aa11.32□□□□□ -0.6
LINC01940-201ENST00000455228 CPSF1Q10570 1443 aaKnown RBP11.32□□□□□ -0.6
LINC01940-201ENST00000455228 NCKAP5LQ9HCH0 1330 aa11.32□□□□□ -0.6
LINC01940-201ENST00000455228 ANKRD20A12PQ8NF67 263 aa11.32□□□□□ -0.6
LINC01940-201ENST00000455228 PCDHGA4Q9Y5G9 962 aa11.32□□□□□ -0.6
LINC01940-201ENST00000455228 CCDC61Q9Y6R9 512 aa11.32□□□□□ -0.6
LINC01940-201ENST00000455228 AATKQ6ZMQ8 1374 aa11.32□□□□□ -0.6
LINC01940-201ENST00000455228 H0YHG0 523 aa11.32□□□□□ -0.6
LINC01940-201ENST00000455228 SKILP12757 684 aa11.32□□□□□ -0.6
LINC01940-201ENST00000455228 SARNPP82979 210 aaKnown RBP11.32□□□□□ -0.6
LINC01940-201ENST00000455228 TRAF1Q13077 416 aa11.32□□□□□ -0.6
LINC01940-201ENST00000455228 CUL4AQ13619 759 aa11.32□□□□□ -0.6
LINC01940-201ENST00000455228 BMS1Q14692 1282 aaKnown RBP11.32□□□□□ -0.6
LINC01940-201ENST00000455228 USP48Q86UV5 1035 aa11.32□□□□□ -0.6
LINC01940-201ENST00000455228 MIEF2Q96C03 454 aa11.32□□□□□ -0.6
LINC01940-201ENST00000455228 CWC15Q9P013 229 aaKnown RBP11.32□□□□□ -0.6
LINC01940-201ENST00000455228 CEP126Q9P2H0 1117 aa11.32□□□□□ -0.6
LINC01940-201ENST00000455228 CLTCQ00610 1675 aaKnown RBP11.31□□□□□ -0.6
LINC01940-201ENST00000455228 GADD45BO75293 160 aaPredicted RBP11.31□□□□□ -0.6
LINC01940-201ENST00000455228 EIF4A2Q14240 407 aaKnown RBP11.31□□□□□ -0.6
LINC01940-201ENST00000455228 TXNDC2Q86VQ3 553 aa11.31□□□□□ -0.6
LINC01940-201ENST00000455228 USP25Q9UHP3 1055 aa11.31□□□□□ -0.6
LINC01940-201ENST00000455228 KIAA0232Q92628 1395 aa11.31□□□□□ -0.6
LINC01940-201ENST00000455228 PPFIA2O75334 1257 aa11.31□□□□□ -0.6
LINC01940-201ENST00000455228 NOM1Q5C9Z4 860 aaKnown RBP11.31□□□□□ -0.6
LINC01940-201ENST00000455228 G2E3Q7L622 706 aa11.31□□□□□ -0.6
LINC01940-201ENST00000455228 DRC1Q96MC2 740 aa11.31□□□□□ -0.6
LINC01940-201ENST00000455228 AGAP3Q96P47 875 aa11.31□□□□□ -0.6
LINC01940-201ENST00000455228 RRP15Q9Y3B9 282 aaKnown RBP11.31□□□□□ -0.6
LINC01940-201ENST00000455228 ALKQ9UM73 1620 aa11.31□□□□□ -0.6
LINC01940-201ENST00000455228 ALDH1B1P30837 517 aa11.3□□□□□ -0.6
LINC01940-201ENST00000455228 ZSCAN16Q9H4T2 348 aaPredicted RBP11.3□□□□□ -0.6
LINC01940-201ENST00000455228 RGS12O14924 1447 aa11.3□□□□□ -0.6
LINC01940-201ENST00000455228 GNAI3P08754 354 aa11.3□□□□□ -0.6
LINC01940-201ENST00000455228 KMT5BQ4FZB7 885 aa11.3□□□□□ -0.6
LINC01940-201ENST00000455228 PPM1EQ8WY54 764 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms