RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 MEIS3Q99687 375 aa20.91■□□□□ 0.94
CCDC90B-202ENST00000455220 ZBTB40Q9NUA8 1239 aa20.91■□□□□ 0.94
CCDC90B-202ENST00000455220 GRM8O00222 908 aa20.9■□□□□ 0.94
CCDC90B-202ENST00000455220 AAMPQ13685 434 aa20.9■□□□□ 0.94
CCDC90B-202ENST00000455220 MSH5O43196 834 aa20.89■□□□□ 0.94
CCDC90B-202ENST00000455220 ERICH6BQ5W0A0 696 aa20.89■□□□□ 0.94
CCDC90B-202ENST00000455220 GNAI3P08754 354 aa20.89■□□□□ 0.93
CCDC90B-202ENST00000455220 NBPF7P0C2Y1 421 aaPredicted RBP20.89■□□□□ 0.93
CCDC90B-202ENST00000455220 C9orf78Q9NZ63 289 aaPredicted RBP20.89■□□□□ 0.93
CCDC90B-202ENST00000455220 H7C1W4 665 aa20.88■□□□□ 0.93
CCDC90B-202ENST00000455220 TM4SF1P30408 202 aa20.88■□□□□ 0.93
CCDC90B-202ENST00000455220 CASP7P55210 303 aa20.88■□□□□ 0.93
CCDC90B-202ENST00000455220 NFIXQ14938 502 aa20.88■□□□□ 0.93
CCDC90B-202ENST00000455220 NLGN1Q8N2Q7 840 aa20.88■□□□□ 0.93
CCDC90B-202ENST00000455220 SETDB2Q96T68 719 aa20.88■□□□□ 0.93
CCDC90B-202ENST00000455220 CASZ1Q86V15 1759 aa20.88■□□□□ 0.93
CCDC90B-202ENST00000455220 PCCAP05165 728 aaPredicted RBP20.87■□□□□ 0.93
CCDC90B-202ENST00000455220 SUSD4Q5VX71 490 aa20.87■□□□□ 0.93
CCDC90B-202ENST00000455220 ZBTB38Q8NAP3 1195 aaPredicted RBP20.87■□□□□ 0.93
CCDC90B-202ENST00000455220 CARMIL3Q8ND23 1372 aa20.87■□□□□ 0.93
CCDC90B-202ENST00000455220 NTSR2O95665 410 aa20.86■□□□□ 0.93
CCDC90B-202ENST00000455220 UBTFL1P0CB47 393 aaPredicted RBP20.86■□□□□ 0.93
CCDC90B-202ENST00000455220 BICDL1Q6ZP65 573 aa20.86■□□□□ 0.93
CCDC90B-202ENST00000455220 PPP1R42Q7Z4L9 355 aa20.86■□□□□ 0.93
CCDC90B-202ENST00000455220 SLC16A10Q8TF71 515 aa20.86■□□□□ 0.93
CCDC90B-202ENST00000455220 PDGFDQ9GZP0 370 aaPredicted RBP20.86■□□□□ 0.93
CCDC90B-202ENST00000455220 UTP14AQ9BVJ6 771 aaKnown RBP20.85■□□□□ 0.93
CCDC90B-202ENST00000455220 CDHR2Q9BYE9 1310 aa20.85■□□□□ 0.93
CCDC90B-202ENST00000455220 UBE3BQ7Z3V4 1068 aa20.85■□□□□ 0.93
CCDC90B-202ENST00000455220 TRMT112Q9UI30 125 aaKnown RBP20.85■□□□□ 0.93
CCDC90B-202ENST00000455220 GNAI2P04899 355 aa20.84■□□□□ 0.93
CCDC90B-202ENST00000455220 R3HDM1Q15032 1099 aaKnown RBP20.84■□□□□ 0.93
CCDC90B-202ENST00000455220 HDAC5Q9UQL6 1122 aa20.84■□□□□ 0.93
CCDC90B-202ENST00000455220 SH3TC1Q8TE82 1336 aa20.83■□□□□ 0.93
CCDC90B-202ENST00000455220 DDR1Q08345 913 aa20.83■□□□□ 0.92
CCDC90B-202ENST00000455220 FAM89AQ96GI7 184 aa20.83■□□□□ 0.92
CCDC90B-202ENST00000455220 NYXQ9GZU5 481 aa20.83■□□□□ 0.92
CCDC90B-202ENST00000455220 NRXN2Q9P2S2 1712 aa20.82■□□□□ 0.92
CCDC90B-202ENST00000455220 POLRMTO00411 1230 aaKnown RBP20.82■□□□□ 0.92
CCDC90B-202ENST00000455220 KAZALD1Q96I82 304 aa20.82■□□□□ 0.92
CCDC90B-202ENST00000455220 SUCLG2Q96I99 432 aa20.82■□□□□ 0.92
CCDC90B-202ENST00000455220 LAMB2P55268 1798 aa20.82■□□□□ 0.92
CCDC90B-202ENST00000455220 NBPF5PQ86XG9 351 aaPredicted RBP20.81■□□□□ 0.92
CCDC90B-202ENST00000455220 JARID2Q92833 1246 aaPredicted RBP20.81■□□□□ 0.92
CCDC90B-202ENST00000455220 PLA2G12BQ9BX93 195 aa20.81■□□□□ 0.92
CCDC90B-202ENST00000455220 C1orf115Q9H7X2 142 aa20.81■□□□□ 0.92
CCDC90B-202ENST00000455220 LRRFIP2Q9Y608 721 aaKnown RBP20.81■□□□□ 0.92
CCDC90B-202ENST00000455220 FAM177BA6PVY3 158 aa20.8■□□□□ 0.92
CCDC90B-202ENST00000455220 MSL1Q68DK7 614 aa20.8■□□□□ 0.92
CCDC90B-202ENST00000455220 DDX60Q8IY21 1712 aaKnown RBP20.8■□□□□ 0.92
CCDC90B-202ENST00000455220 RTL5Q5HYW3 569 aaPredicted RBP20.8■□□□□ 0.92
CCDC90B-202ENST00000455220 TPTE2Q6XPS3 522 aa20.8■□□□□ 0.92
CCDC90B-202ENST00000455220 SYNE4Q8N205 404 aa20.8■□□□□ 0.92
CCDC90B-202ENST00000455220 SERPINB2P05120 415 aa20.79■□□□□ 0.92
CCDC90B-202ENST00000455220 MMP10P09238 476 aa20.79■□□□□ 0.92
CCDC90B-202ENST00000455220 NUTM1Q86Y26 1132 aa20.79■□□□□ 0.92
CCDC90B-202ENST00000455220 PCDHB15Q9Y5E8 787 aa20.79■□□□□ 0.92
CCDC90B-202ENST00000455220 IRS4O14654 1257 aaPredicted RBP20.78■□□□□ 0.92
CCDC90B-202ENST00000455220 RABL6Q3YEC7 729 aaPredicted RBP20.78■□□□□ 0.92
CCDC90B-202ENST00000455220 RIC1Q4ADV7 1423 aa20.78■□□□□ 0.92
CCDC90B-202ENST00000455220 EPHA10Q5JZY3 1008 aa20.78■□□□□ 0.92
CCDC90B-202ENST00000455220 SLC10A5Q5PT55 438 aa20.78■□□□□ 0.92
CCDC90B-202ENST00000455220 CEP85Q6P2H3 762 aa20.78■□□□□ 0.92
CCDC90B-202ENST00000455220 ABCC12Q96J65 1359 aa20.78■□□□□ 0.92
CCDC90B-202ENST00000455220 MYH3P11055 1940 aa20.78■□□□□ 0.92
CCDC90B-202ENST00000455220 HSP90B1P14625 803 aaKnown RBP20.77■□□□□ 0.92
CCDC90B-202ENST00000455220 FOXO4P98177 505 aa20.77■□□□□ 0.92
CCDC90B-202ENST00000455220 MTX1Q13505 466 aa20.77■□□□□ 0.92
CCDC90B-202ENST00000455220 ERFEQ4G0M1 354 aa20.77■□□□□ 0.92
CCDC90B-202ENST00000455220 PRR5LQ6MZQ0 368 aa20.77■□□□□ 0.92
CCDC90B-202ENST00000455220 ANKRD44Q8N8A2 993 aa20.77■□□□□ 0.92
CCDC90B-202ENST00000455220 CNBD1Q8NA66 436 aa20.77■□□□□ 0.92
CCDC90B-202ENST00000455220 MTFR1LQ9H019 292 aa20.77■□□□□ 0.92
CCDC90B-202ENST00000455220 BICC1Q9H694 974 aaKnown RBP20.77■□□□□ 0.92
CCDC90B-202ENST00000455220 GTF3C3Q9Y5Q9 886 aa20.77■□□□□ 0.92
CCDC90B-202ENST00000455220 PSDA5PKW4 1024 aaPredicted RBP20.76■□□□□ 0.91
CCDC90B-202ENST00000455220 RPAP2Q8IXW5 612 aaPredicted RBP20.76■□□□□ 0.91
CCDC90B-202ENST00000455220 PDE8AO60658 829 aa20.76■□□□□ 0.91
CCDC90B-202ENST00000455220 PARP3Q9Y6F1 533 aa20.76■□□□□ 0.91
CCDC90B-202ENST00000455220 GTF2E1P29083 439 aaPredicted RBP20.75■□□□□ 0.91
CCDC90B-202ENST00000455220 SIRT2Q8IXJ6 389 aa20.75■□□□□ 0.91
CCDC90B-202ENST00000455220 ZBTB7AO95365 584 aa20.74■□□□□ 0.91
CCDC90B-202ENST00000455220 CSF1RP07333 972 aa20.74■□□□□ 0.91
CCDC90B-202ENST00000455220 HCLS1P14317 486 aaPredicted RBP20.74■□□□□ 0.91
CCDC90B-202ENST00000455220 ATP8B2P98198 1209 aa20.74■□□□□ 0.91
CCDC90B-202ENST00000455220 PPP4R2Q9NY27 417 aa20.74■□□□□ 0.91
CCDC90B-202ENST00000455220 CTSWP56202 376 aa20.73■□□□□ 0.91
CCDC90B-202ENST00000455220 ST5P78524 1137 aa20.73■□□□□ 0.91
CCDC90B-202ENST00000455220 TNRC6CQ9HCJ0 1690 aaKnown RBP20.73■□□□□ 0.91
CCDC90B-202ENST00000455220 LMBR1LQ6UX01 489 aa20.72■□□□□ 0.91
CCDC90B-202ENST00000455220 SRCAPQ6ZRS2 3230 aa20.72■□□□□ 0.91
CCDC90B-202ENST00000455220 PNMA6EA0A0J9YXQ4 647 aa20.72■□□□□ 0.91
CCDC90B-202ENST00000455220 NPHP1O15259 732 aa20.72■□□□□ 0.91
CCDC90B-202ENST00000455220 HDAC1Q13547 482 aaPredicted RBP20.72■□□□□ 0.91
CCDC90B-202ENST00000455220 TTLL11Q8NHH1 800 aa20.72■□□□□ 0.91
CCDC90B-202ENST00000455220 SSH3Q8TE77 659 aa20.72■□□□□ 0.91
CCDC90B-202ENST00000455220 ANKRD31Q8N7Z5 1873 aa20.71■□□□□ 0.91
CCDC90B-202ENST00000455220 POLA2Q14181 598 aa20.71■□□□□ 0.91
CCDC90B-202ENST00000455220 CCDC24Q8N4L8 307 aa20.71■□□□□ 0.91
CCDC90B-202ENST00000455220 RTL9Q8NET4 1388 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms