RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 PALLDQ8WX93 1383 aa8.41□□□□□ -1.06
ECHDC1-210ENST00000454859 TAF1LQ8IZX4 1826 aa8.4□□□□□ -1.06
ECHDC1-210ENST00000454859 LOC102724428A0A0B4J2F2 783 aa8.4□□□□□ -1.06
ECHDC1-210ENST00000454859 SURF6O75683 361 aaKnown RBP8.4□□□□□ -1.06
ECHDC1-210ENST00000454859 ANXA1P04083 346 aa8.4□□□□□ -1.06
ECHDC1-210ENST00000454859 MX1P20591 662 aa8.4□□□□□ -1.06
ECHDC1-210ENST00000454859 EIF5P55010 431 aaKnown RBP8.4□□□□□ -1.06
ECHDC1-210ENST00000454859 SIK1P57059 783 aa8.4□□□□□ -1.06
ECHDC1-210ENST00000454859 G3BP1Q13283 466 aaKnown RBP eCLIP8.4□□□□□ -1.061e-11■■■□□ 15.6
ECHDC1-210ENST00000454859 CLASRPQ8N2M8 674 aaKnown RBP8.4□□□□□ -1.06
ECHDC1-210ENST00000454859 ZNF652Q9Y2D9 606 aa8.4□□□□□ -1.06
ECHDC1-210ENST00000454859 A1BGP04217 495 aa8.4□□□□□ -1.07
ECHDC1-210ENST00000454859 HSPA1LP34931 641 aa8.4□□□□□ -1.07
ECHDC1-210ENST00000454859 ZBTB38Q8NAP3 1195 aaPredicted RBP8.4□□□□□ -1.07
ECHDC1-210ENST00000454859 TBC1D32Q96NH3 1257 aa8.4□□□□□ -1.07
ECHDC1-210ENST00000454859 RFX7Q2KHR2 1363 aa8.4□□□□□ -1.07
ECHDC1-210ENST00000454859 SCN7AQ01118 1682 aa8.39□□□□□ -1.07
ECHDC1-210ENST00000454859 RGPD3A6NKT7 1758 aaPredicted RBP8.39□□□□□ -1.07
ECHDC1-210ENST00000454859 RGPD4Q7Z3J3 1758 aa8.39□□□□□ -1.07
ECHDC1-210ENST00000454859 GLRX3O76003 335 aaKnown RBP8.39□□□□□ -1.07
ECHDC1-210ENST00000454859 RBM25P49756 843 aaKnown RBP8.39□□□□□ -1.07
ECHDC1-210ENST00000454859 CWF19L2Q2TBE0 894 aaKnown RBP8.39□□□□□ -1.07
ECHDC1-210ENST00000454859 RTL9Q8NET4 1388 aa8.39□□□□□ -1.07
ECHDC1-210ENST00000454859 SUCLG2Q96I99 432 aa8.39□□□□□ -1.07
ECHDC1-210ENST00000454859 RBM42Q9BTD8 480 aaKnown RBP8.39□□□□□ -1.07
ECHDC1-210ENST00000454859 AFF2P51816 1311 aa8.39□□□□□ -1.07
ECHDC1-210ENST00000454859 HIP1O00291 1037 aa8.38□□□□□ -1.07
ECHDC1-210ENST00000454859 REC8O95072 547 aa8.38□□□□□ -1.07
ECHDC1-210ENST00000454859 BECN1Q14457 450 aa8.38□□□□□ -1.07
ECHDC1-210ENST00000454859 ZNF772Q68DY9 489 aaPredicted RBP8.38□□□□□ -1.07
ECHDC1-210ENST00000454859 KAZALD1Q96I82 304 aa8.38□□□□□ -1.07
ECHDC1-210ENST00000454859 BICC1Q9H694 974 aaKnown RBP8.38□□□□□ -1.07
ECHDC1-210ENST00000454859 MYH14Q7Z406 1995 aaKnown RBP8.38□□□□□ -1.07
ECHDC1-210ENST00000454859 FAM98CQ17RN3 349 aaKnown RBP8.38□□□□□ -1.07
ECHDC1-210ENST00000454859 ABCC12Q96J65 1359 aa8.38□□□□□ -1.07
ECHDC1-210ENST00000454859 CSF1RP07333 972 aa8.37□□□□□ -1.07
ECHDC1-210ENST00000454859 ATP6V1AP38606 617 aa8.37□□□□□ -1.07
ECHDC1-210ENST00000454859 TTLL7Q6ZT98 887 aa8.37□□□□□ -1.07
ECHDC1-210ENST00000454859 ZNF34Q8IZ26 560 aa8.37□□□□□ -1.07
ECHDC1-210ENST00000454859 EXOC6BQ9Y2D4 811 aa8.37□□□□□ -1.07
ECHDC1-210ENST00000454859 IL15P40933 162 aaPredicted RBP8.37□□□□□ -1.07
ECHDC1-210ENST00000454859 RFX5P48382 616 aaPredicted RBP8.37□□□□□ -1.07
ECHDC1-210ENST00000454859 FOXO4P98177 505 aa8.37□□□□□ -1.07
ECHDC1-210ENST00000454859 OS9Q13438 667 aaPredicted RBP8.37□□□□□ -1.07
ECHDC1-210ENST00000454859 INTS5Q6P9B9 1019 aaKnown RBP8.37□□□□□ -1.07
ECHDC1-210ENST00000454859 FAM196AQ6ZSG2 479 aa8.37□□□□□ -1.07
ECHDC1-210ENST00000454859 UBE3BQ7Z3V4 1068 aa8.37□□□□□ -1.07
ECHDC1-210ENST00000454859 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.37□□□□□ -1.07
ECHDC1-210ENST00000454859 IL17RAQ96F46 866 aa8.37□□□□□ -1.07
ECHDC1-210ENST00000454859 SLC4A9Q96Q91 983 aa8.37□□□□□ -1.07
ECHDC1-210ENST00000454859 BCL11BQ9C0K0 894 aaPredicted RBP8.37□□□□□ -1.07
ECHDC1-210ENST00000454859 COL24A1Q17RW2 1714 aa8.37□□□□□ -1.07
ECHDC1-210ENST00000454859 ZBTB22O15209 634 aa8.36□□□□□ -1.07
ECHDC1-210ENST00000454859 SLC27A3Q5K4L6 730 aa8.36□□□□□ -1.07
ECHDC1-210ENST00000454859 DZIP3Q86Y13 1208 aaKnown RBP8.36□□□□□ -1.07
ECHDC1-210ENST00000454859 SYTL4Q96C24 671 aaPredicted RBP8.36□□□□□ -1.07
ECHDC1-210ENST00000454859 ECHDC1Q9NTX5 307 aa8.36□□□□□ -1.07
ECHDC1-210ENST00000454859 CRKLP46109 303 aaKnown RBP8.36□□□□□ -1.07
ECHDC1-210ENST00000454859 TBC1D9Q6ZT07 1266 aa8.36□□□□□ -1.07
ECHDC1-210ENST00000454859 NLRP10Q86W26 655 aa8.36□□□□□ -1.07
ECHDC1-210ENST00000454859 CNTROBQ8N137 903 aa8.36□□□□□ -1.07
ECHDC1-210ENST00000454859 C22orf23Q9BZE7 217 aa8.36□□□□□ -1.07
ECHDC1-210ENST00000454859 AKAP2Q9Y2D5 859 aa8.36□□□□□ -1.07
ECHDC1-210ENST00000454859 LRP5O75197 1615 aa8.36□□□□□ -1.07
ECHDC1-210ENST00000454859 IFIT2P09913 472 aaKnown RBP8.35□□□□□ -1.07
ECHDC1-210ENST00000454859 GSPT1P15170 499 aaKnown RBP8.35□□□□□ -1.07
ECHDC1-210ENST00000454859 RUFY2Q8WXA3 655 aa8.35□□□□□ -1.07
ECHDC1-210ENST00000454859 DAXXQ9UER7 740 aaPredicted RBP8.35□□□□□ -1.07
ECHDC1-210ENST00000454859 RIC1Q4ADV7 1423 aa8.35□□□□□ -1.07
ECHDC1-210ENST00000454859 RAD50Q92878 1312 aa8.35□□□□□ -1.07
ECHDC1-210ENST00000454859 PDE8AO60658 829 aa8.35□□□□□ -1.07
ECHDC1-210ENST00000454859 IGSF3O75054 1194 aa8.35□□□□□ -1.07
ECHDC1-210ENST00000454859 RPS6KA4O75676 772 aa8.35□□□□□ -1.07
ECHDC1-210ENST00000454859 SDSP20132 328 aa8.35□□□□□ -1.07
ECHDC1-210ENST00000454859 ANAPC15P60006 121 aa8.35□□□□□ -1.07
ECHDC1-210ENST00000454859 PTPN12Q05209 780 aaKnown RBP8.35□□□□□ -1.07
ECHDC1-210ENST00000454859 LRRFIP1Q32MZ4 808 aaKnown RBP8.35□□□□□ -1.07
ECHDC1-210ENST00000454859 SNX21Q969T3 373 aa8.35□□□□□ -1.07
ECHDC1-210ENST00000454859 EVI5LQ96CN4 794 aa8.35□□□□□ -1.07
ECHDC1-210ENST00000454859 ZBTB1Q9Y2K1 713 aa8.35□□□□□ -1.07
ECHDC1-210ENST00000454859 BRWD3Q6RI45 1802 aa8.34□□□□□ -1.07
ECHDC1-210ENST00000454859 C4BP0C0L5 1744 aa8.34□□□□□ -1.07
ECHDC1-210ENST00000454859 ARAP2Q8WZ64 1704 aa8.34□□□□□ -1.07
ECHDC1-210ENST00000454859 RBM6P78332 1123 aaKnown RBP8.34□□□□□ -1.07
ECHDC1-210ENST00000454859 PI4K2BQ8TCG2 481 aa8.34□□□□□ -1.07
ECHDC1-210ENST00000454859 NYXQ9GZU5 481 aa8.34□□□□□ -1.07
ECHDC1-210ENST00000454859 ZBTB3Q9H5J0 574 aa8.34□□□□□ -1.07
ECHDC1-210ENST00000454859 EYA2O00167 538 aa8.34□□□□□ -1.08
ECHDC1-210ENST00000454859 CAMTA2O94983 1202 aa8.34□□□□□ -1.08
ECHDC1-210ENST00000454859 ATP5JP18859 108 aa8.34□□□□□ -1.08
ECHDC1-210ENST00000454859 MCCP23508 829 aa8.34□□□□□ -1.08
ECHDC1-210ENST00000454859 CCDC57Q2TAC2 916 aa8.34□□□□□ -1.08
ECHDC1-210ENST00000454859 LMBR1LQ6UX01 489 aa8.34□□□□□ -1.08
ECHDC1-210ENST00000454859 SKAP1Q86WV1 359 aa8.34□□□□□ -1.08
ECHDC1-210ENST00000454859 QTRT2Q9H974 415 aaKnown RBP8.34□□□□□ -1.08
ECHDC1-210ENST00000454859 DDX60Q8IY21 1712 aaKnown RBP8.33□□□□□ -1.08
ECHDC1-210ENST00000454859 SH3TC1Q8TE82 1336 aa8.33□□□□□ -1.08
ECHDC1-210ENST00000454859 ATP5J2-PTCD1G3V325 749 aa8.33□□□□□ -1.08
ECHDC1-210ENST00000454859 SASH1O94885 1247 aa8.33□□□□□ -1.08
ECHDC1-210ENST00000454859 SEPT12Q8IYM1 358 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms