RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 PEAK1Q9H792 1746 aa14.32□□□□□ -0.12
SMPD4-213ENST00000454468 KIF13AQ9H1H9 1805 aa14.32□□□□□ -0.12
SMPD4-213ENST00000454468 NUTM2BA6NNL0 878 aaPredicted RBP14.32□□□□□ -0.12
SMPD4-213ENST00000454468 NUTM2EB1AL46 878 aaPredicted RBP14.32□□□□□ -0.12
SMPD4-213ENST00000454468 SASH1O94885 1247 aa14.32□□□□□ -0.12
SMPD4-213ENST00000454468 ADAMTS2O95450 1211 aa14.32□□□□□ -0.12
SMPD4-213ENST00000454468 APPP05067 770 aa14.32□□□□□ -0.12
SMPD4-213ENST00000454468 GJB2P29033 226 aa14.32□□□□□ -0.12
SMPD4-213ENST00000454468 NUTM2AQ8IVF1 878 aaPredicted RBP14.32□□□□□ -0.12
SMPD4-213ENST00000454468 LMBRD1Q9NUN5 540 aa14.32□□□□□ -0.12
SMPD4-213ENST00000454468 WDR33Q9C0J8 1336 aaKnown RBP14.32□□□□□ -0.12
SMPD4-213ENST00000454468 NRKQ7Z2Y5 1582 aa14.32□□□□□ -0.12
SMPD4-213ENST00000454468 GADD45BO75293 160 aaPredicted RBP14.32□□□□□ -0.12
SMPD4-213ENST00000454468 HOXB7P09629 217 aa14.32□□□□□ -0.12
SMPD4-213ENST00000454468 CHST3Q7LGC8 479 aa14.32□□□□□ -0.12
SMPD4-213ENST00000454468 FAM184AQ8NB25 1140 aa14.32□□□□□ -0.12
SMPD4-213ENST00000454468 SYAP1Q96A49 352 aaPredicted RBP14.32□□□□□ -0.12
SMPD4-213ENST00000454468 DCAF5Q96JK2 942 aa14.32□□□□□ -0.12
SMPD4-213ENST00000454468 STAP2Q9UGK3 403 aa14.32□□□□□ -0.12
SMPD4-213ENST00000454468 A0A0D9SFI3 127 aa14.31□□□□□ -0.12
SMPD4-213ENST00000454468 ESPNB1AK53 854 aa14.31□□□□□ -0.12
SMPD4-213ENST00000454468 POLA2Q14181 598 aa14.31□□□□□ -0.12
SMPD4-213ENST00000454468 USP48Q86UV5 1035 aa14.31□□□□□ -0.12
SMPD4-213ENST00000454468 METTL22Q9BUU2 404 aaPredicted RBP14.31□□□□□ -0.12
SMPD4-213ENST00000454468 C3P01024 1663 aa14.31□□□□□ -0.12
SMPD4-213ENST00000454468 ADGRL3Q9HAR2 1447 aa14.31□□□□□ -0.12
SMPD4-213ENST00000454468 HSPA4P34932 840 aa14.31□□□□□ -0.12
SMPD4-213ENST00000454468 TOMM22Q9NS69 142 aa14.31□□□□□ -0.12
SMPD4-213ENST00000454468 CAMK4Q16566 473 aa14.3□□□□□ -0.12
SMPD4-213ENST00000454468 CCDC57Q2TAC2 916 aa14.3□□□□□ -0.12
SMPD4-213ENST00000454468 FAM89AQ96GI7 184 aa14.3□□□□□ -0.12
SMPD4-213ENST00000454468 TMOD3Q9NYL9 352 aa14.3□□□□□ -0.12
SMPD4-213ENST00000454468 ZDHHC9Q9Y397 364 aa14.3□□□□□ -0.12
SMPD4-213ENST00000454468 HAND2P61296 217 aa14.3□□□□□ -0.12
SMPD4-213ENST00000454468 STX6O43752 255 aa14.29□□□□□ -0.12
SMPD4-213ENST00000454468 LARGE1O95461 756 aa14.29□□□□□ -0.12
SMPD4-213ENST00000454468 GUCY1B3Q02153 619 aa14.29□□□□□ -0.12
SMPD4-213ENST00000454468 GPT2Q8TD30 523 aa14.29□□□□□ -0.12
SMPD4-213ENST00000454468 RAD50Q92878 1312 aa14.29□□□□□ -0.12
SMPD4-213ENST00000454468 CREB3L3Q68CJ9 461 aa14.29□□□□□ -0.12
SMPD4-213ENST00000454468 TMEM63CQ9P1W3 806 aa14.29□□□□□ -0.12
SMPD4-213ENST00000454468 CCT2P78371 535 aaKnown RBP14.29□□□□□ -0.12
SMPD4-213ENST00000454468 RBSNQ9H1K0 784 aa14.29□□□□□ -0.12
SMPD4-213ENST00000454468 SYT1P21579 422 aa14.28□□□□□ -0.12
SMPD4-213ENST00000454468 ANAPC15P60006 121 aa14.28□□□□□ -0.12
SMPD4-213ENST00000454468 DNM1Q05193 864 aaKnown RBP14.28□□□□□ -0.12
SMPD4-213ENST00000454468 CEP126Q9P2H0 1117 aa14.28□□□□□ -0.12
SMPD4-213ENST00000454468 MON2Q7Z3U7 1717 aa14.28□□□□□ -0.12
SMPD4-213ENST00000454468 PSMA5P28066 241 aa14.28□□□□□ -0.12
SMPD4-213ENST00000454468 RUFY3Q7L099 469 aa14.28□□□□□ -0.12
SMPD4-213ENST00000454468 LSG1Q9H089 658 aaKnown RBP14.28□□□□□ -0.12
SMPD4-213ENST00000454468 PXDNQ92626 1479 aa14.28□□□□□ -0.12
SMPD4-213ENST00000454468 TTC41PQ6P2S7 1318 aa14.28□□□□□ -0.12
SMPD4-213ENST00000454468 CWC25Q9NXE8 425 aaPredicted RBP14.28□□□□□ -0.12
SMPD4-213ENST00000454468 NPHP1O15259 732 aa14.27□□□□□ -0.12
SMPD4-213ENST00000454468 BICD2Q8TD16 824 aa14.27□□□□□ -0.12
SMPD4-213ENST00000454468 CCDC171Q6TFL3 1326 aa14.27□□□□□ -0.13
SMPD4-213ENST00000454468 MBD3O95983 291 aa14.27□□□□□ -0.13
SMPD4-213ENST00000454468 IFIT1P09914 478 aaKnown RBP14.27□□□□□ -0.13
SMPD4-213ENST00000454468 ZNF589Q86UQ0 364 aaPredicted RBP14.27□□□□□ -0.13
SMPD4-213ENST00000454468 CNNM1Q9NRU3 951 aa14.27□□□□□ -0.13
SMPD4-213ENST00000454468 TBC1D2BQ9UPU7 963 aa14.27□□□□□ -0.13
SMPD4-213ENST00000454468 CEMIPQ8WUJ3 1361 aa14.27□□□□□ -0.13
SMPD4-213ENST00000454468 FSD2A1L4K1 749 aa14.27□□□□□ -0.13
SMPD4-213ENST00000454468 DDIT3P35638 169 aa14.27□□□□□ -0.13
SMPD4-213ENST00000454468 DRC7Q8IY82 874 aa14.27□□□□□ -0.13
SMPD4-213ENST00000454468 ATP6V1DQ9Y5K8 247 aa14.27□□□□□ -0.13
SMPD4-213ENST00000454468 TTC39AQ5SRH9 613 aa14.26□□□□□ -0.13
SMPD4-213ENST00000454468 KIF6Q6ZMV9 814 aa14.26□□□□□ -0.13
SMPD4-213ENST00000454468 HELBQ8NG08 1087 aaPredicted RBP14.26□□□□□ -0.13
SMPD4-213ENST00000454468 ACSBG1Q96GR2 724 aa14.26□□□□□ -0.13
SMPD4-213ENST00000454468 ARHGAP23Q9P227 1491 aa14.26□□□□□ -0.13
SMPD4-213ENST00000454468 SETD1AO15047 1707 aaKnown RBP14.26□□□□□ -0.13
SMPD4-213ENST00000454468 HIP1O00291 1037 aa14.26□□□□□ -0.13
SMPD4-213ENST00000454468 TNNI3KQ59H18 835 aa14.26□□□□□ -0.13
SMPD4-213ENST00000454468 BCL11BQ9C0K0 894 aaPredicted RBP14.26□□□□□ -0.13
SMPD4-213ENST00000454468 TSPY26PQ9H489 355 aa14.26□□□□□ -0.13
SMPD4-213ENST00000454468 DBNLQ9UJU6 430 aaKnown RBP14.26□□□□□ -0.13
SMPD4-213ENST00000454468 FPGT-TNNI3KV9GXZ4 949 aa14.26□□□□□ -0.13
SMPD4-213ENST00000454468 LRRC24Q50LG9 513 aa14.26□□□□□ -0.13
SMPD4-213ENST00000454468 GIMAP6Q6P9H5 292 aa14.26□□□□□ -0.13
SMPD4-213ENST00000454468 KAZALD1Q96I82 304 aa14.26□□□□□ -0.13
SMPD4-213ENST00000454468 BTG4Q9NY30 223 aa14.26□□□□□ -0.13
SMPD4-213ENST00000454468 SLAIN2Q9P270 581 aa14.26□□□□□ -0.13
SMPD4-213ENST00000454468 IL2RBP14784 551 aa14.25□□□□□ -0.13
SMPD4-213ENST00000454468 BRF1Q92994 677 aa14.25□□□□□ -0.13
SMPD4-213ENST00000454468 PUS3Q9BZE2 481 aaKnown RBP14.25□□□□□ -0.13
SMPD4-213ENST00000454468 FER1L4A9Z1Z3 1794 aa14.25□□□□□ -0.13
SMPD4-213ENST00000454468 DNAJC10Q8IXB1 793 aa14.25□□□□□ -0.13
SMPD4-213ENST00000454468 TAF6LQ9Y6J9 622 aa14.25□□□□□ -0.13
SMPD4-213ENST00000454468 ZSCAN22P10073 491 aaPredicted RBP14.24□□□□□ -0.13
SMPD4-213ENST00000454468 PDIA6Q15084 440 aa14.24□□□□□ -0.13
SMPD4-213ENST00000454468 SYNE4Q8N205 404 aa14.24□□□□□ -0.13
SMPD4-213ENST00000454468 ZNF335Q9H4Z2 1342 aaPredicted RBP14.24□□□□□ -0.13
SMPD4-213ENST00000454468 SLIT1O75093 1534 aa14.24□□□□□ -0.13
SMPD4-213ENST00000454468 SLC27A2O14975 620 aa14.24□□□□□ -0.13
SMPD4-213ENST00000454468 ME3Q16798 604 aa14.24□□□□□ -0.13
SMPD4-213ENST00000454468 ASAP1Q9ULH1 1129 aa14.24□□□□□ -0.13
SMPD4-213ENST00000454468 IDH1O75874 414 aaKnown RBP14.24□□□□□ -0.13
SMPD4-213ENST00000454468 BRD1O95696 1058 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms