RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 FER1L6Q2WGJ9 1857 aa13.83□□□□□ -0.2
DDX39A-203ENST00000454233 TOMM70O94826 608 aa13.83□□□□□ -0.2
DDX39A-203ENST00000454233 TCIRG1Q13488 830 aa13.83□□□□□ -0.2
DDX39A-203ENST00000454233 CCDC27Q2M243 656 aa13.83□□□□□ -0.2
DDX39A-203ENST00000454233 PLBD2Q8NHP8 589 aa13.83□□□□□ -0.2
DDX39A-203ENST00000454233 C7orf43Q8WVR3 580 aa13.83□□□□□ -0.2
DDX39A-203ENST00000454233 RBM17Q96I25 401 aaKnown RBP13.83□□□□□ -0.2
DDX39A-203ENST00000454233 RNF123Q5XPI4 1314 aa13.83□□□□□ -0.2
DDX39A-203ENST00000454233 CCDC88AQ3V6T2 1871 aa13.82□□□□□ -0.2
DDX39A-203ENST00000454233 GLTPD2A6NH11 291 aa13.82□□□□□ -0.2
DDX39A-203ENST00000454233 ELL2O00472 640 aaPredicted RBP13.82□□□□□ -0.2
DDX39A-203ENST00000454233 DPY19L2Q6NUT2 758 aa13.82□□□□□ -0.2
DDX39A-203ENST00000454233 ANKRD13DQ6ZTN6 518 aa13.82□□□□□ -0.2
DDX39A-203ENST00000454233 RTKN2Q8IZC4 609 aa13.82□□□□□ -0.2
DDX39A-203ENST00000454233 NLRP3Q96P20 1036 aa13.82□□□□□ -0.2
DDX39A-203ENST00000454233 RRAGCQ9HB90 399 aa13.82□□□□□ -0.2
DDX39A-203ENST00000454233 TNRC6CQ9HCJ0 1690 aaKnown RBP13.82□□□□□ -0.2
DDX39A-203ENST00000454233 HOXA10P31260 410 aaPredicted RBP13.81□□□□□ -0.2
DDX39A-203ENST00000454233 FKBP4Q02790 459 aaKnown RBP eCLIP13.81□□□□□ -0.2
DDX39A-203ENST00000454233 SLC10A5Q5PT55 438 aa13.81□□□□□ -0.2
DDX39A-203ENST00000454233 NLRP10Q86W26 655 aa13.81□□□□□ -0.2
DDX39A-203ENST00000454233 TRMT112Q9UI30 125 aaKnown RBP13.81□□□□□ -0.2
DDX39A-203ENST00000454233 TIAM2Q8IVF5 1701 aa13.81□□□□□ -0.2
DDX39A-203ENST00000454233 HSPA6P17066 643 aa13.8□□□□□ -0.2
DDX39A-203ENST00000454233 GOLGA2Q08379 1002 aa13.8□□□□□ -0.2
DDX39A-203ENST00000454233 NCBP3Q53F19 620 aaKnown RBP13.8□□□□□ -0.2
DDX39A-203ENST00000454233 CC2D2BQ6DHV5 1058 aa13.8□□□□□ -0.2
DDX39A-203ENST00000454233 WWC1Q8IX03 1113 aa13.8□□□□□ -0.2
DDX39A-203ENST00000454233 C8orf58Q8NAV2 365 aa13.8□□□□□ -0.2
DDX39A-203ENST00000454233 RBM46Q8TBY0 533 aaKnown RBP13.8□□□□□ -0.2
DDX39A-203ENST00000454233 CRAMP1Q96RY5 1269 aa13.8□□□□□ -0.2
DDX39A-203ENST00000454233 SH3TC1Q8TE82 1336 aa13.8□□□□□ -0.2
DDX39A-203ENST00000454233 ANKRD36CQ5JPF3 1778 aa13.8□□□□□ -0.2
DDX39A-203ENST00000454233 VEGFAP15692 232 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-203ENST00000454233 CCDC30Q5VVM6 783 aa13.79□□□□□ -0.2
DDX39A-203ENST00000454233 OLFM4Q6UX06 510 aa13.79□□□□□ -0.2
DDX39A-203ENST00000454233 RIC3Q7Z5B4 369 aa13.79□□□□□ -0.2
DDX39A-203ENST00000454233 TMX4Q9H1E5 349 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-203ENST00000454233 DICER1Q9UPY3 1922 aaKnown RBP13.79□□□□□ -0.2
DDX39A-203ENST00000454233 PPEF1O14829 653 aaPredicted RBP13.78□□□□□ -0.2
DDX39A-203ENST00000454233 HCLS1P14317 486 aaPredicted RBP13.78□□□□□ -0.2
DDX39A-203ENST00000454233 GRIPAP1Q4V328 841 aa13.78□□□□□ -0.2
DDX39A-203ENST00000454233 C3orf67Q6ZVT6 689 aa13.78□□□□□ -0.2
DDX39A-203ENST00000454233 TSR2Q969E8 191 aaKnown RBP13.78□□□□□ -0.2
DDX39A-203ENST00000454233 ZNF277Q9NRM2 450 aaPredicted RBP13.78□□□□□ -0.2
DDX39A-203ENST00000454233 IL16Q14005 1332 aa13.78□□□□□ -0.2
DDX39A-203ENST00000454233 ATP5J2-PTCD1G3V325 749 aa13.77□□□□□ -0.21
DDX39A-203ENST00000454233 DDX58O95786 925 aaKnown RBP13.77□□□□□ -0.21
DDX39A-203ENST00000454233 SYNE4Q8N205 404 aa13.77□□□□□ -0.21
DDX39A-203ENST00000454233 ISCA1Q9BUE6 129 aa13.77□□□□□ -0.21
DDX39A-203ENST00000454233 STK31Q9BXU1 1019 aa13.77□□□□□ -0.21
DDX39A-203ENST00000454233 PHAXQ9H814 394 aaKnown RBP13.77□□□□□ -0.21
DDX39A-203ENST00000454233 TCERG1O14776 1098 aaKnown RBP13.76□□□□□ -0.21
DDX39A-203ENST00000454233 IARSP41252 1262 aaKnown RBP13.76□□□□□ -0.21
DDX39A-203ENST00000454233 FSTL1Q12841 308 aa13.76□□□□□ -0.21
DDX39A-203ENST00000454233 DDX46Q7L014 1031 aaKnown RBP13.76□□□□□ -0.21
DDX39A-203ENST00000454233 FAM9BQ8IZU0 186 aa13.76□□□□□ -0.21
DDX39A-203ENST00000454233 TSPYL6Q8N831 410 aa13.76□□□□□ -0.21
DDX39A-203ENST00000454233 PSMD1Q99460 953 aa13.76□□□□□ -0.21
DDX39A-203ENST00000454233 SALL2Q9Y467 1007 aaPredicted RBP13.76□□□□□ -0.21
DDX39A-203ENST00000454233 ABCC4O15439 1325 aa13.75□□□□□ -0.21
DDX39A-203ENST00000454233 TRIM28Q13263 835 aaKnown RBP13.75□□□□□ -0.21
DDX39A-203ENST00000454233 TWISTNBQ3B726 338 aaPredicted RBP13.75□□□□□ -0.21
DDX39A-203ENST00000454233 WDR63Q8IWG1 891 aa13.75□□□□□ -0.21
DDX39A-203ENST00000454233 SMC1BQ8NDV3 1235 aa13.75□□□□□ -0.21
DDX39A-203ENST00000454233 ZNF428Q96B54 188 aa13.75□□□□□ -0.21
DDX39A-203ENST00000454233 BBOX1O75936 387 aa13.74□□□□□ -0.21
DDX39A-203ENST00000454233 DDNO94850 711 aaPredicted RBP13.74□□□□□ -0.21
DDX39A-203ENST00000454233 APLP1P51693 650 aa13.74□□□□□ -0.21
DDX39A-203ENST00000454233 JDP2Q8WYK2 163 aa13.74□□□□□ -0.21
DDX39A-203ENST00000454233 FAM89AQ96GI7 184 aa13.74□□□□□ -0.21
DDX39A-203ENST00000454233 MYD88Q99836 296 aa13.74□□□□□ -0.21
DDX39A-203ENST00000454233 ATP6V0A2Q9Y487 856 aa13.74□□□□□ -0.21
DDX39A-203ENST00000454233 WDR90Q96KV7 1748 aa13.73□□□□□ -0.21
DDX39A-203ENST00000454233 HSP90B1P14625 803 aaKnown RBP13.73□□□□□ -0.21
DDX39A-203ENST00000454233 GRAPQ13588 217 aa13.73□□□□□ -0.21
DDX39A-203ENST00000454233 GRAPLQ8TC17 118 aaPredicted RBP13.73□□□□□ -0.21
DDX39A-203ENST00000454233 SNED1Q8TER0 1413 aa13.73□□□□□ -0.21
DDX39A-203ENST00000454233 FANCIQ9NVI1 1328 aa13.72□□□□□ -0.21
DDX39A-203ENST00000454233 IQCA1LA6NCM1 817 aa13.72□□□□□ -0.21
DDX39A-203ENST00000454233 POTECB2RU33 542 aa13.72□□□□□ -0.21
DDX39A-203ENST00000454233 IRS4O14654 1257 aaPredicted RBP13.72□□□□□ -0.21
DDX39A-203ENST00000454233 RTL5Q5HYW3 569 aaPredicted RBP13.72□□□□□ -0.21
DDX39A-203ENST00000454233 TMC4Q7Z404 712 aa13.72□□□□□ -0.21
DDX39A-203ENST00000454233 SP8Q8IXZ3 490 aa13.72□□□□□ -0.21
DDX39A-203ENST00000454233 LARGE2Q8N3Y3 721 aa13.72□□□□□ -0.21
DDX39A-203ENST00000454233 ZBTB38Q8NAP3 1195 aaPredicted RBP13.72□□□□□ -0.21
DDX39A-203ENST00000454233 CCDC191Q8NCU4 936 aa13.72□□□□□ -0.21
DDX39A-203ENST00000454233 SUPT20HQ8NEM7 779 aa13.72□□□□□ -0.21
DDX39A-203ENST00000454233 LAMB2P55268 1798 aa13.72□□□□□ -0.21
DDX39A-203ENST00000454233 FZD9O00144 591 aa13.71□□□□□ -0.21
DDX39A-203ENST00000454233 EIF6P56537 245 aaKnown RBP13.71□□□□□ -0.21
DDX39A-203ENST00000454233 SF3B3Q15393 1217 aaKnown RBP13.71□□□□□ -0.21
DDX39A-203ENST00000454233 KSR2Q6VAB6 950 aa13.71□□□□□ -0.21
DDX39A-203ENST00000454233 METTL22Q9BUU2 404 aaPredicted RBP13.71□□□□□ -0.21
DDX39A-203ENST00000454233 CWC25Q9NXE8 425 aaPredicted RBP13.71□□□□□ -0.21
DDX39A-203ENST00000454233 MAP3K2Q9Y2U5 619 aa13.71□□□□□ -0.21
DDX39A-203ENST00000454233 ZNF541Q9H0D2 1346 aa13.7□□□□□ -0.22
DDX39A-203ENST00000454233 PI4KAP2A4QPH2 592 aa13.7□□□□□ -0.22
DDX39A-203ENST00000454233 PPIP5K2O43314 1243 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 422.9 ms