RNA–Protein interactions for RNA: ENST00000453996.6

CTU2-202, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-202ENST00000453996 HLFQ16534 295 aa26.31■■□□□ 1.8
CTU2-202ENST00000453996 PTF1AQ7RTS3 328 aa26.31■■□□□ 1.8
CTU2-202ENST00000453996 TBC1D2BQ9UPU7 963 aa26.3■■□□□ 1.8
CTU2-202ENST00000453996 LY75O60449 1722 aa26.3■■□□□ 1.8
CTU2-202ENST00000453996 BRWD3Q6RI45 1802 aa26.29■■□□□ 1.8
CTU2-202ENST00000453996 FOXO4P98177 505 aa26.29■■□□□ 1.8
CTU2-202ENST00000453996 G3BP1Q13283 466 aaKnown RBP eCLIP26.29■■□□□ 1.8
CTU2-202ENST00000453996 RTL5Q5HYW3 569 aaPredicted RBP26.29■■□□□ 1.8
CTU2-202ENST00000453996 STAP2Q9UGK3 403 aa26.29■■□□□ 1.8
CTU2-202ENST00000453996 AOX1Q06278 1338 aa26.29■■□□□ 1.8
CTU2-202ENST00000453996 CDC45O75419 566 aa26.28■■□□□ 1.8
CTU2-202ENST00000453996 PCCAP05165 728 aaPredicted RBP26.28■■□□□ 1.8
CTU2-202ENST00000453996 LMBR1LQ6UX01 489 aa26.28■■□□□ 1.8
CTU2-202ENST00000453996 BCORQ6W2J9 1755 aa26.27■■□□□ 1.8
CTU2-202ENST00000453996 LINC00116Q8NCU8 138 aa26.27■■□□□ 1.8
CTU2-202ENST00000453996 COPRSQ9NQ92 184 aa26.27■■□□□ 1.8
CTU2-202ENST00000453996 GPTP24298 496 aa26.26■■□□□ 1.79
CTU2-202ENST00000453996 RFX5P48382 616 aaPredicted RBP26.26■■□□□ 1.79
CTU2-202ENST00000453996 NLRP10Q86W26 655 aa26.26■■□□□ 1.79
CTU2-202ENST00000453996 ZBTB38Q8NAP3 1195 aaPredicted RBP26.26■■□□□ 1.79
CTU2-202ENST00000453996 NUTM1Q86Y26 1132 aa26.25■■□□□ 1.79
CTU2-202ENST00000453996 CLASRPQ8N2M8 674 aaKnown RBP26.25■■□□□ 1.79
CTU2-202ENST00000453996 CNTNAP4Q9C0A0 1308 aa26.25■■□□□ 1.79
CTU2-202ENST00000453996 SDSP20132 328 aa26.25■■□□□ 1.79
CTU2-202ENST00000453996 TBC1D9Q6ZT07 1266 aa26.25■■□□□ 1.79
CTU2-202ENST00000453996 IPO9Q96P70 1041 aaKnown RBP26.25■■□□□ 1.79
CTU2-202ENST00000453996 SIL1Q9H173 461 aa26.25■■□□□ 1.79
CTU2-202ENST00000453996 PTPN12Q05209 780 aaKnown RBP26.24■■□□□ 1.79
CTU2-202ENST00000453996 TSHZ3Q63HK5 1081 aa26.24■■□□□ 1.79
CTU2-202ENST00000453996 KLHDC4Q8TBB5 520 aa26.24■■□□□ 1.79
CTU2-202ENST00000453996 TAF1LQ8IZX4 1826 aa26.24■■□□□ 1.79
CTU2-202ENST00000453996 MFAP1P55081 439 aaKnown RBP26.23■■□□□ 1.79
CTU2-202ENST00000453996 CHMP3Q9Y3E7 222 aa26.23■■□□□ 1.79
CTU2-202ENST00000453996 CDHR2Q9BYE9 1310 aa26.23■■□□□ 1.79
CTU2-202ENST00000453996 SASH1O94885 1247 aa26.23■■□□□ 1.79
CTU2-202ENST00000453996 ZNF772Q68DY9 489 aaPredicted RBP26.23■■□□□ 1.79
CTU2-202ENST00000453996 MYH3P11055 1940 aa26.22■■□□□ 1.79
CTU2-202ENST00000453996 CAMTA2O94983 1202 aa26.22■■□□□ 1.79
CTU2-202ENST00000453996 ZNF34Q8IZ26 560 aa26.22■■□□□ 1.79
CTU2-202ENST00000453996 FAM89AQ96GI7 184 aa26.22■■□□□ 1.79
CTU2-202ENST00000453996 PLA2G12BQ9BX93 195 aa26.22■■□□□ 1.79
CTU2-202ENST00000453996 TBC1D32Q96NH3 1257 aa26.21■■□□□ 1.79
CTU2-202ENST00000453996 CCNL1Q9UK58 526 aaPredicted RBP26.21■■□□□ 1.79
CTU2-202ENST00000453996 USP42Q9H9J4 1324 aaKnown RBP26.21■■□□□ 1.79
CTU2-202ENST00000453996 KCNQ4P56696 695 aa26.2■■□□□ 1.79
CTU2-202ENST00000453996 BCL11BQ9C0K0 894 aaPredicted RBP26.2■■□□□ 1.79
CTU2-202ENST00000453996 RC3H1Q5TC82 1133 aaKnown RBP26.2■■□□□ 1.78
CTU2-202ENST00000453996 KRT27Q7Z3Y8 459 aa26.2■■□□□ 1.78
CTU2-202ENST00000453996 DDRGK1Q96HY6 314 aa26.2■■□□□ 1.78
CTU2-202ENST00000453996 UBN2Q6ZU65 1347 aa26.2■■□□□ 1.78
CTU2-202ENST00000453996 SCN7AQ01118 1682 aa26.2■■□□□ 1.78
CTU2-202ENST00000453996 AK9Q5TCS8 1911 aa26.2■■□□□ 1.78
CTU2-202ENST00000453996 TTC41PQ6P2S7 1318 aa26.19■■□□□ 1.78
CTU2-202ENST00000453996 EIF5BO60841 1220 aaKnown RBP26.19■■□□□ 1.78
CTU2-202ENST00000453996 IFIT2P09913 472 aaKnown RBP26.18■■□□□ 1.78
CTU2-202ENST00000453996 CASC1Q6TDU7 716 aa26.18■■□□□ 1.78
CTU2-202ENST00000453996 FAM196AQ6ZSG2 479 aa26.18■■□□□ 1.78
CTU2-202ENST00000453996 GPATCH3Q96I76 525 aa26.18■■□□□ 1.78
CTU2-202ENST00000453996 TRMT112Q9UI30 125 aaKnown RBP26.18■■□□□ 1.78
CTU2-202ENST00000453996 AACSQ86V21 672 aa26.18■■□□□ 1.78
CTU2-202ENST00000453996 PI4K2BQ8TCG2 481 aa26.18■■□□□ 1.78
CTU2-202ENST00000453996 RBM6P78332 1123 aaKnown RBP26.17■■□□□ 1.78
CTU2-202ENST00000453996 ZNF652Q9Y2D9 606 aa26.17■■□□□ 1.78
CTU2-202ENST00000453996 PARP10Q53GL7 1025 aa26.15■■□□□ 1.78
CTU2-202ENST00000453996 C22orf23Q9BZE7 217 aa26.15■■□□□ 1.78
CTU2-202ENST00000453996 C4BP0C0L5 1744 aa26.15■■□□□ 1.78
CTU2-202ENST00000453996 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.15■■□□□ 1.78
CTU2-202ENST00000453996 TRIM6-TRIM34B2RNG4 842 aa26.14■■□□□ 1.78
CTU2-202ENST00000453996 IRS4O14654 1257 aaPredicted RBP26.14■■□□□ 1.78
CTU2-202ENST00000453996 ERC2O15083 957 aa26.14■■□□□ 1.78
CTU2-202ENST00000453996 CSF1RP07333 972 aa26.14■■□□□ 1.78
CTU2-202ENST00000453996 CCDC57Q2TAC2 916 aa26.14■■□□□ 1.78
CTU2-202ENST00000453996 EAF2Q96CJ1 260 aaPredicted RBP26.14■■□□□ 1.78
CTU2-202ENST00000453996 ECHDC1Q9NTX5 307 aa26.14■■□□□ 1.78
CTU2-202ENST00000453996 LAMB2P55268 1798 aa26.14■■□□□ 1.77
CTU2-202ENST00000453996 RPS6KA4O75676 772 aa26.13■■□□□ 1.77
CTU2-202ENST00000453996 CLEC4GQ6UXB4 293 aa26.13■■□□□ 1.77
CTU2-202ENST00000453996 SYNE4Q8N205 404 aa26.13■■□□□ 1.77
CTU2-202ENST00000453996 RGL2O15211 777 aa26.12■■□□□ 1.77
CTU2-202ENST00000453996 GLRX3O76003 335 aaKnown RBP26.12■■□□□ 1.77
CTU2-202ENST00000453996 TFCP2Q12800 502 aa26.12■■□□□ 1.77
CTU2-202ENST00000453996 MSH5O43196 834 aa26.12■■□□□ 1.77
CTU2-202ENST00000453996 CTSWP56202 376 aa26.12■■□□□ 1.77
CTU2-202ENST00000453996 RILPL2Q969X0 211 aa26.12■■□□□ 1.77
CTU2-202ENST00000453996 NIP7Q9Y221 180 aaKnown RBP eCLIP26.12■■□□□ 1.77
CTU2-202ENST00000453996 GNPATO15228 680 aa26.11■■□□□ 1.77
CTU2-202ENST00000453996 PDE8AO60658 829 aa26.11■■□□□ 1.77
CTU2-202ENST00000453996 CIAO1O76071 339 aa26.11■■□□□ 1.77
CTU2-202ENST00000453996 SUSD4Q5VX71 490 aa26.11■■□□□ 1.77
CTU2-202ENST00000453996 AK7Q96M32 723 aa26.11■■□□□ 1.77
CTU2-202ENST00000453996 UTP14AQ9BVJ6 771 aaKnown RBP26.11■■□□□ 1.77
CTU2-202ENST00000453996 SH3TC1Q8TE82 1336 aa26.11■■□□□ 1.77
CTU2-202ENST00000453996 DDX60Q8IY21 1712 aaKnown RBP26.11■■□□□ 1.77
CTU2-202ENST00000453996 EYA2O00167 538 aa26.1■■□□□ 1.77
CTU2-202ENST00000453996 IL15P40933 162 aaPredicted RBP26.1■■□□□ 1.77
CTU2-202ENST00000453996 TNNI3KQ59H18 835 aa26.1■■□□□ 1.77
CTU2-202ENST00000453996 ATG9AQ7Z3C6 839 aa26.1■■□□□ 1.77
CTU2-202ENST00000453996 CCDC8Q9H0W5 538 aaPredicted RBP26.1■■□□□ 1.77
CTU2-202ENST00000453996 FPGT-TNNI3KV9GXZ4 949 aa26.1■■□□□ 1.77
CTU2-202ENST00000453996 IFIT5Q13325 482 aaKnown RBP26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms