RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 XRCC6P12956 609 aaKnown RBP eCLIP22■■□□□ 1.11
MECP2-205ENST00000453960 JCADQ9P266 1359 aa22■■□□□ 1.11
MECP2-205ENST00000453960 PTPN12Q05209 780 aaKnown RBP22■■□□□ 1.11
MECP2-205ENST00000453960 H7C1W4 665 aa21.99■■□□□ 1.11
MECP2-205ENST00000453960 BRD1O95696 1058 aa21.99■■□□□ 1.11
MECP2-205ENST00000453960 TM6SF1Q9BZW5 370 aa21.99■■□□□ 1.11
MECP2-205ENST00000453960 DIAPH3Q9NSV4 1193 aa21.99■■□□□ 1.11
MECP2-205ENST00000453960 LMBRD1Q9NUN5 540 aa21.99■■□□□ 1.11
MECP2-205ENST00000453960 MRE11P49959 708 aa21.98■■□□□ 1.11
MECP2-205ENST00000453960 CWC27Q6UX04 472 aaKnown RBP21.98■■□□□ 1.11
MECP2-205ENST00000453960 GZF1Q9H116 711 aaPredicted RBP21.98■■□□□ 1.11
MECP2-205ENST00000453960 RFX7Q2KHR2 1363 aa21.98■■□□□ 1.11
MECP2-205ENST00000453960 KIAA1211Q6ZU35 1233 aa21.97■■□□□ 1.11
MECP2-205ENST00000453960 RASEFQ8IZ41 740 aa21.97■■□□□ 1.11
MECP2-205ENST00000453960 PLCH1Q4KWH8 1693 aa21.96■■□□□ 1.11
MECP2-205ENST00000453960 UBAP1LF5GYI3 381 aa21.96■■□□□ 1.11
MECP2-205ENST00000453960 NECTIN1Q15223 517 aa21.96■■□□□ 1.11
MECP2-205ENST00000453960 UPF3BQ9BZI7 483 aaKnown RBP21.96■■□□□ 1.11
MECP2-205ENST00000453960 ITGB4P16144 1822 aa21.96■■□□□ 1.11
MECP2-205ENST00000453960 MED23Q9ULK4 1368 aa21.95■■□□□ 1.1
MECP2-205ENST00000453960 TLR7Q9NYK1 1049 aaKnown RBP21.95■■□□□ 1.1
MECP2-205ENST00000453960 LRP6O75581 1613 aa21.95■■□□□ 1.1
MECP2-205ENST00000453960 CCDC171Q6TFL3 1326 aa21.95■■□□□ 1.1
MECP2-205ENST00000453960 ATP5JP18859 108 aa21.94■■□□□ 1.1
MECP2-205ENST00000453960 UBE3BQ7Z3V4 1068 aa21.94■■□□□ 1.1
MECP2-205ENST00000453960 CCDC8Q9H0W5 538 aaPredicted RBP21.94■■□□□ 1.1
MECP2-205ENST00000453960 COL14A1Q05707 1796 aaKnown RBP21.94■■□□□ 1.1
MECP2-205ENST00000453960 A0A087WZG4 1122 aa21.94■■□□□ 1.1
MECP2-205ENST00000453960 PIP4K2AP48426 406 aaPredicted RBP21.94■■□□□ 1.1
MECP2-205ENST00000453960 FOXO4P98177 505 aa21.94■■□□□ 1.1
MECP2-205ENST00000453960 PTH1RQ03431 593 aa21.94■■□□□ 1.1
MECP2-205ENST00000453960 KLHDC4Q8TBB5 520 aa21.94■■□□□ 1.1
MECP2-205ENST00000453960 MAP4K1Q92918 833 aa21.94■■□□□ 1.1
MECP2-205ENST00000453960 DISP2A7MBM2 1401 aa21.94■■□□□ 1.1
MECP2-205ENST00000453960 COL22A1Q8NFW1 1626 aaPredicted RBP21.93■■□□□ 1.1
MECP2-205ENST00000453960 TICAM2Q86XR7 235 aa21.93■■□□□ 1.1
MECP2-205ENST00000453960 TNNI3KQ59H18 835 aa21.92■■□□□ 1.1
MECP2-205ENST00000453960 MCTP1Q6DN14 999 aa21.92■■□□□ 1.1
MECP2-205ENST00000453960 SIL1Q9H173 461 aa21.92■■□□□ 1.1
MECP2-205ENST00000453960 GRPEL1Q9HAV7 217 aa21.92■■□□□ 1.1
MECP2-205ENST00000453960 ZSWIM6Q9HCJ5 1215 aa21.92■■□□□ 1.1
MECP2-205ENST00000453960 FPGT-TNNI3KV9GXZ4 949 aa21.92■■□□□ 1.1
MECP2-205ENST00000453960 TTLL7Q6ZT98 887 aa21.92■■□□□ 1.1
MECP2-205ENST00000453960 CCDC191Q8NCU4 936 aa21.92■■□□□ 1.1
MECP2-205ENST00000453960 GPR108Q9NPR9 543 aa21.92■■□□□ 1.1
MECP2-205ENST00000453960 DBNLQ9UJU6 430 aaKnown RBP21.92■■□□□ 1.1
MECP2-205ENST00000453960 WNK3Q9BYP7 1800 aa21.92■■□□□ 1.1
MECP2-205ENST00000453960 RPAP1Q9BWH6 1393 aaPredicted RBP21.91■■□□□ 1.1
MECP2-205ENST00000453960 ATP5J2-PTCD1G3V325 749 aa21.91■■□□□ 1.1
MECP2-205ENST00000453960 PTCD1O75127 700 aaKnown RBP21.91■■□□□ 1.1
MECP2-205ENST00000453960 VPS53Q5VIR6 699 aa21.91■■□□□ 1.1
MECP2-205ENST00000453960 CWC25Q9NXE8 425 aaPredicted RBP21.91■■□□□ 1.1
MECP2-205ENST00000453960 ZNF445P59923 1031 aa21.9■■□□□ 1.1
MECP2-205ENST00000453960 NMIQ13287 307 aaPredicted RBP21.9■■□□□ 1.1
MECP2-205ENST00000453960 GAS2L3Q86XJ1 694 aa21.9■■□□□ 1.1
MECP2-205ENST00000453960 VSIG10Q8N0Z9 540 aa21.9■■□□□ 1.1
MECP2-205ENST00000453960 LIMCH1Q9UPQ0 1083 aa21.9■■□□□ 1.1
MECP2-205ENST00000453960 DDX49Q9Y6V7 483 aaKnown RBP21.9■■□□□ 1.1
MECP2-205ENST00000453960 SPEF2Q9C093 1822 aa21.9■■□□□ 1.1
MECP2-205ENST00000453960 AK2P54819 239 aa21.89■■□□□ 1.1
MECP2-205ENST00000453960 RUFY3Q7L099 469 aa21.89■■□□□ 1.1
MECP2-205ENST00000453960 ATG3Q9NT62 314 aa21.89■■□□□ 1.1
MECP2-205ENST00000453960 TFCP2Q12800 502 aa21.89■■□□□ 1.09
MECP2-205ENST00000453960 TSGA10IPQ3SY00 556 aa21.89■■□□□ 1.09
MECP2-205ENST00000453960 FAM227BQ96M60 508 aa21.89■■□□□ 1.09
MECP2-205ENST00000453960 ISCA1Q9BUE6 129 aa21.89■■□□□ 1.09
MECP2-205ENST00000453960 ALDH8A1Q9H2A2 487 aaPredicted RBP21.89■■□□□ 1.09
MECP2-205ENST00000453960 BOLA2Q9H3K6 86 aa21.89■■□□□ 1.09
MECP2-205ENST00000453960 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.88■■□□□ 1.09
MECP2-205ENST00000453960 A1BGP04217 495 aa21.88■■□□□ 1.09
MECP2-205ENST00000453960 TRIM28Q13263 835 aaKnown RBP21.88■■□□□ 1.09
MECP2-205ENST00000453960 AHDC1Q5TGY3 1603 aaPredicted RBP21.88■■□□□ 1.09
MECP2-205ENST00000453960 LMBR1LQ6UX01 489 aa21.87■■□□□ 1.09
MECP2-205ENST00000453960 ATG9AQ7Z3C6 839 aa21.87■■□□□ 1.09
MECP2-205ENST00000453960 RBM8AQ9Y5S9 174 aaKnown RBP21.87■■□□□ 1.09
MECP2-205ENST00000453960 A0A0D9SFI3 127 aa21.86■■□□□ 1.09
MECP2-205ENST00000453960 COL16A1Q07092 1604 aaPredicted RBP21.86■■□□□ 1.09
MECP2-205ENST00000453960 USPL1Q5W0Q7 1092 aa21.86■■□□□ 1.09
MECP2-205ENST00000453960 CREB3L3Q68CJ9 461 aa21.86■■□□□ 1.09
MECP2-205ENST00000453960 JARID2Q92833 1246 aaPredicted RBP21.86■■□□□ 1.09
MECP2-205ENST00000453960 TEX13AQ9BXU3 409 aaPredicted RBP21.86■■□□□ 1.09
MECP2-205ENST00000453960 TCHHQ07283 1943 aa21.86■■□□□ 1.09
MECP2-205ENST00000453960 WDR33Q9C0J8 1336 aaKnown RBP21.86■■□□□ 1.09
MECP2-205ENST00000453960 PRPF40BQ6NWY9 871 aaKnown RBP21.86■■□□□ 1.09
MECP2-205ENST00000453960 ZSCAN31Q96LW9 406 aaPredicted RBP21.86■■□□□ 1.09
MECP2-205ENST00000453960 HAUS7Q99871 368 aa21.86■■□□□ 1.09
MECP2-205ENST00000453960 ANKRD36CQ5JPF3 1778 aa21.85■■□□□ 1.09
MECP2-205ENST00000453960 CASTP20810 708 aaKnown RBP21.85■■□□□ 1.09
MECP2-205ENST00000453960 ADCK5Q3MIX3 580 aa21.85■■□□□ 1.09
MECP2-205ENST00000453960 FAM43AQ8N2R8 423 aa21.85■■□□□ 1.09
MECP2-205ENST00000453960 FSD1Q9BTV5 496 aa21.85■■□□□ 1.09
MECP2-205ENST00000453960 SH2B1Q9NRF2 756 aaPredicted RBP21.85■■□□□ 1.09
MECP2-205ENST00000453960 SOCS7O14512 581 aa21.84■■□□□ 1.09
MECP2-205ENST00000453960 CIAO1O76071 339 aa21.84■■□□□ 1.09
MECP2-205ENST00000453960 EVA1CP58658 441 aa21.84■■□□□ 1.09
MECP2-205ENST00000453960 GPT2Q8TD30 523 aa21.84■■□□□ 1.09
MECP2-205ENST00000453960 DDX54Q8TDD1 881 aaKnown RBP21.84■■□□□ 1.09
MECP2-205ENST00000453960 PANK2Q9BZ23 570 aa21.84■■□□□ 1.09
MECP2-205ENST00000453960 CYP46A1Q9Y6A2 500 aa21.84■■□□□ 1.09
MECP2-205ENST00000453960 SLC27A2O14975 620 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms