RNA–Protein interactions for RNA: ENST00000453727.6

LMO3-210, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 2,403 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-210ENST00000453727 IPO4Q8TEX9 1081 aaKnown RBP10.46□□□□□ -0.74
LMO3-210ENST00000453727 LNPKQ9C0E8 428 aa10.46□□□□□ -0.74
LMO3-210ENST00000453727 C9orf78Q9NZ63 289 aaPredicted RBP10.46□□□□□ -0.74
LMO3-210ENST00000453727 NEURL1BA8MQ27 555 aa10.45□□□□□ -0.74
LMO3-210ENST00000453727 HMMRO75330 724 aa10.45□□□□□ -0.74
LMO3-210ENST00000453727 TRIM37O94972 964 aa10.45□□□□□ -0.74
LMO3-210ENST00000453727 TERF1P54274 439 aa10.45□□□□□ -0.74
LMO3-210ENST00000453727 ISY1Q9ULR0 285 aaKnown RBP10.45□□□□□ -0.74
LMO3-210ENST00000453727 CRKLP46109 303 aaKnown RBP10.45□□□□□ -0.74
LMO3-210ENST00000453727 UTP14CQ5TAP6 766 aaKnown RBP10.45□□□□□ -0.74
LMO3-210ENST00000453727 GRPEL1Q9HAV7 217 aa10.45□□□□□ -0.74
LMO3-210ENST00000453727 GRM8O00222 908 aa10.44□□□□□ -0.74
LMO3-210ENST00000453727 ZBTB3Q9H5J0 574 aa10.44□□□□□ -0.74
LMO3-210ENST00000453727 CCDC87Q9NVE4 849 aa10.44□□□□□ -0.74
LMO3-210ENST00000453727 UTYO14607 1347 aa10.44□□□□□ -0.74
LMO3-210ENST00000453727 ATP5J2-PTCD1G3V325 749 aa10.44□□□□□ -0.74
LMO3-210ENST00000453727 IL6STP40189 918 aaPredicted RBP10.44□□□□□ -0.74
LMO3-210ENST00000453727 GCKRQ14397 625 aa10.44□□□□□ -0.74
LMO3-210ENST00000453727 INTS5Q6P9B9 1019 aaKnown RBP10.44□□□□□ -0.74
LMO3-210ENST00000453727 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.44□□□□□ -0.74
LMO3-210ENST00000453727 CCNL1Q9UK58 526 aaPredicted RBP10.44□□□□□ -0.74
LMO3-210ENST00000453727 IBTKQ9P2D0 1353 aaPredicted RBP10.43□□□□□ -0.74
LMO3-210ENST00000453727 CICQ96RK0 1608 aaPredicted RBP10.43□□□□□ -0.74
LMO3-210ENST00000453727 PPP1R42Q7Z4L9 355 aa10.43□□□□□ -0.74
LMO3-210ENST00000453727 LINC00116Q8NCU8 138 aa10.43□□□□□ -0.74
LMO3-210ENST00000453727 ZNF831Q5JPB2 1677 aa10.43□□□□□ -0.74
LMO3-210ENST00000453727 MYH14Q7Z406 1995 aaKnown RBP10.43□□□□□ -0.74
LMO3-210ENST00000453727 APBB1O00213 710 aa10.43□□□□□ -0.74
LMO3-210ENST00000453727 KIF6Q6ZMV9 814 aa10.43□□□□□ -0.74
LMO3-210ENST00000453727 SSH3Q8TE77 659 aa10.43□□□□□ -0.74
LMO3-210ENST00000453727 KAZALD1Q96I82 304 aa10.43□□□□□ -0.74
LMO3-210ENST00000453727 SUCLG2Q96I99 432 aa10.43□□□□□ -0.74
LMO3-210ENST00000453727 EIF5P55010 431 aaKnown RBP10.42□□□□□ -0.74
LMO3-210ENST00000453727 EXOC6BQ9Y2D4 811 aa10.42□□□□□ -0.74
LMO3-210ENST00000453727 LY75O60449 1722 aa10.42□□□□□ -0.74
LMO3-210ENST00000453727 COL5A3P25940 1745 aaPredicted RBP10.42□□□□□ -0.74
LMO3-210ENST00000453727 SRGAP3O43295 1099 aa10.42□□□□□ -0.74
LMO3-210ENST00000453727 OFD1O75665 1012 aa10.42□□□□□ -0.74
LMO3-210ENST00000453727 DMTNQ08495 405 aa10.42□□□□□ -0.74
LMO3-210ENST00000453727 POLA2Q14181 598 aa10.42□□□□□ -0.74
LMO3-210ENST00000453727 ILDR1Q86SU0 546 aaPredicted RBP10.42□□□□□ -0.74
LMO3-210ENST00000453727 JARID2Q92833 1246 aaPredicted RBP10.42□□□□□ -0.74
LMO3-210ENST00000453727 TBC1D2BQ9UPU7 963 aa10.42□□□□□ -0.74
LMO3-210ENST00000453727 SMARCA5O60264 1052 aaPredicted RBP10.41□□□□□ -0.74
LMO3-210ENST00000453727 TRAK2O60296 914 aa10.41□□□□□ -0.74
LMO3-210ENST00000453727 MCM4P33991 863 aa10.41□□□□□ -0.74
LMO3-210ENST00000453727 PRDM10Q9NQV6 1147 aa10.41□□□□□ -0.74
LMO3-210ENST00000453727 RREB1Q92766 1687 aa10.41□□□□□ -0.74
LMO3-210ENST00000453727 MAP3K15Q6ZN16 1313 aa10.41□□□□□ -0.74
LMO3-210ENST00000453727 MSNP26038 577 aaKnown RBP10.41□□□□□ -0.74
LMO3-210ENST00000453727 MTX1Q13505 466 aa10.41□□□□□ -0.74
LMO3-210ENST00000453727 DZIP3Q86Y13 1208 aaKnown RBP10.41□□□□□ -0.74
LMO3-210ENST00000453727 BICC1Q9H694 974 aaKnown RBP10.41□□□□□ -0.74
LMO3-210ENST00000453727 HDAC5Q9UQL6 1122 aa10.41□□□□□ -0.74
LMO3-210ENST00000453727 A0A087WZG4 1122 aa10.4□□□□□ -0.74
LMO3-210ENST00000453727 PAXIP1Q6ZW49 1069 aaPredicted RBP10.4□□□□□ -0.74
LMO3-210ENST00000453727 UBE3BQ7Z3V4 1068 aa10.4□□□□□ -0.74
LMO3-210ENST00000453727 C16orf71Q8IYS4 520 aaPredicted RBP10.4□□□□□ -0.74
LMO3-210ENST00000453727 LRRC4BQ9NT99 713 aa10.4□□□□□ -0.74
LMO3-210ENST00000453727 CNTNAP4Q9C0A0 1308 aa10.4□□□□□ -0.75
LMO3-210ENST00000453727 EPHA10Q5JZY3 1008 aa10.39□□□□□ -0.75
LMO3-210ENST00000453727 GIGYF2Q6Y7W6 1299 aaKnown RBP10.39□□□□□ -0.75
LMO3-210ENST00000453727 ANP32BQ92688 251 aaKnown RBP10.39□□□□□ -0.75
LMO3-210ENST00000453727 ARID3AQ99856 593 aa10.39□□□□□ -0.75
LMO3-210ENST00000453727 CWC25Q9NXE8 425 aaPredicted RBP10.39□□□□□ -0.75
LMO3-210ENST00000453727 NUP98P52948 1817 aa10.39□□□□□ -0.75
LMO3-210ENST00000453727 COL15A1P39059 1388 aa10.39□□□□□ -0.75
LMO3-210ENST00000453727 CASP7P55210 303 aa10.39□□□□□ -0.75
LMO3-210ENST00000453727 TCIRG1Q13488 830 aa10.39□□□□□ -0.75
LMO3-210ENST00000453727 HLFQ16534 295 aa10.39□□□□□ -0.75
LMO3-210ENST00000453727 PPP4R3BQ5MIZ7 849 aa10.39□□□□□ -0.75
LMO3-210ENST00000453727 ISCA1Q9BUE6 129 aa10.39□□□□□ -0.75
LMO3-210ENST00000453727 TAF1LQ8IZX4 1826 aa10.38□□□□□ -0.75
LMO3-210ENST00000453727 H7C1W4 665 aa10.38□□□□□ -0.75
LMO3-210ENST00000453727 GNPATO15228 680 aa10.38□□□□□ -0.75
LMO3-210ENST00000453727 SURF6O75683 361 aaKnown RBP10.38□□□□□ -0.75
LMO3-210ENST00000453727 APBA3O96018 575 aa10.38□□□□□ -0.75
LMO3-210ENST00000453727 RC3H1Q5TC82 1133 aaKnown RBP10.38□□□□□ -0.75
LMO3-210ENST00000453727 CCDC191Q8NCU4 936 aa10.38□□□□□ -0.75
LMO3-210ENST00000453727 OTUD7AQ8TE49 926 aaPredicted RBP10.38□□□□□ -0.75
LMO3-210ENST00000453727 ANKRD36CQ5JPF3 1778 aa10.38□□□□□ -0.75
LMO3-210ENST00000453727 ERVV-1B6SEH8 477 aa10.38□□□□□ -0.75
LMO3-210ENST00000453727 SLC27A3Q5K4L6 730 aa10.38□□□□□ -0.75
LMO3-210ENST00000453727 ZSCAN30Q86W11 494 aa10.38□□□□□ -0.75
LMO3-210ENST00000453727 PLEKHM2Q8IWE5 1019 aa10.38□□□□□ -0.75
LMO3-210ENST00000453727 LRRCC1Q9C099 1032 aa10.38□□□□□ -0.75
LMO3-210ENST00000453727 ANTXR1Q9H6X2 564 aa10.38□□□□□ -0.75
LMO3-210ENST00000453727 R3HCC1Q9Y3T6 440 aaKnown RBP10.38□□□□□ -0.75
LMO3-210ENST00000453727 KIF20AO95235 890 aa10.37□□□□□ -0.75
LMO3-210ENST00000453727 TXNRD1Q16881 649 aa10.37□□□□□ -0.75
LMO3-210ENST00000453727 SMIM5Q71RC9 77 aa10.37□□□□□ -0.75
LMO3-210ENST00000453727 PLSCR1O15162 318 aa10.37□□□□□ -0.75
LMO3-210ENST00000453727 RPS6KA4O75676 772 aa10.37□□□□□ -0.75
LMO3-210ENST00000453727 GPTP24298 496 aa10.37□□□□□ -0.75
LMO3-210ENST00000453727 TRIM28Q13263 835 aaKnown RBP10.37□□□□□ -0.75
LMO3-210ENST00000453727 HSP90AB3PQ58FF7 597 aa10.37□□□□□ -0.75
LMO3-210ENST00000453727 PROM2Q8N271 834 aa10.37□□□□□ -0.75
LMO3-210ENST00000453727 PA2G4Q9UQ80 394 aaKnown RBP10.37□□□□□ -0.75
LMO3-210ENST00000453727 RTCBQ9Y3I0 505 aaKnown RBP10.37□□□□□ -0.75
LMO3-210ENST00000453727 C4BP0C0L5 1744 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms