RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 NFKBIEO00221 500 aa20.06■□□□□ 0.8
VCX3B-204ENST00000453306 ALDH1L2Q3SY69 923 aa20.06■□□□□ 0.8
VCX3B-204ENST00000453306 CLEC4GQ6UXB4 293 aa20.06■□□□□ 0.8
VCX3B-204ENST00000453306 CNKSR1Q969H4 720 aa20.06■□□□□ 0.8
VCX3B-204ENST00000453306 WDR90Q96KV7 1748 aa20.06■□□□□ 0.8
VCX3B-204ENST00000453306 C21orf2O43822 256 aa20.05■□□□□ 0.8
VCX3B-204ENST00000453306 SOGA3Q5TF21 947 aa20.05■□□□□ 0.8
VCX3B-204ENST00000453306 ZNF428Q96B54 188 aa20.05■□□□□ 0.8
VCX3B-204ENST00000453306 KLRG1Q96E93 195 aa20.05■□□□□ 0.8
VCX3B-204ENST00000453306 STK31Q9BXU1 1019 aa20.05■□□□□ 0.8
VCX3B-204ENST00000453306 BRPF1P55201 1214 aaPredicted RBP20.04■□□□□ 0.8
VCX3B-204ENST00000453306 STYK1Q6J9G0 422 aa20.04■□□□□ 0.8
VCX3B-204ENST00000453306 PRELPP51888 382 aa20.03■□□□□ 0.8
VCX3B-204ENST00000453306 FLIIQ13045 1269 aa20.03■□□□□ 0.8
VCX3B-204ENST00000453306 ERFEQ4G0M1 354 aa20.03■□□□□ 0.8
VCX3B-204ENST00000453306 CCDC24Q8N4L8 307 aa20.03■□□□□ 0.8
VCX3B-204ENST00000453306 MASTLQ96GX5 879 aa20.03■□□□□ 0.8
VCX3B-204ENST00000453306 ZBTB3Q9H5J0 574 aa20.03■□□□□ 0.8
VCX3B-204ENST00000453306 SMC4Q9NTJ3 1288 aa20.03■□□□□ 0.8
VCX3B-204ENST00000453306 ZNF219Q9P2Y4 722 aaPredicted RBP20.03■□□□□ 0.8
VCX3B-204ENST00000453306 TNNQ9UQP3 1299 aa20.03■□□□□ 0.8
VCX3B-204ENST00000453306 MAP3K15Q6ZN16 1313 aa20.02■□□□□ 0.8
VCX3B-204ENST00000453306 RGL2O15211 777 aa20.02■□□□□ 0.8
VCX3B-204ENST00000453306 NBPF5PQ86XG9 351 aaPredicted RBP20.02■□□□□ 0.8
VCX3B-204ENST00000453306 LTBP3Q9NS15 1303 aa20.02■□□□□ 0.79
VCX3B-204ENST00000453306 SRGNP10124 158 aa20.01■□□□□ 0.79
VCX3B-204ENST00000453306 ANKRD13DQ6ZTN6 518 aa20.01■□□□□ 0.79
VCX3B-204ENST00000453306 CHMP4AQ9BY43 222 aa20.01■□□□□ 0.79
VCX3B-204ENST00000453306 TAOK3Q9H2K8 898 aa20.01■□□□□ 0.79
VCX3B-204ENST00000453306 RCAN3Q9UKA8 241 aa20.01■□□□□ 0.79
VCX3B-204ENST00000453306 NOB1Q9ULX3 412 aaKnown RBP20.01■□□□□ 0.79
VCX3B-204ENST00000453306 ANKRD31Q8N7Z5 1873 aa20.01■□□□□ 0.79
VCX3B-204ENST00000453306 TIAM2Q8IVF5 1701 aa20■□□□□ 0.79
VCX3B-204ENST00000453306 ERVV-1B6SEH8 477 aa20■□□□□ 0.79
VCX3B-204ENST00000453306 F6X3S4 739 aa20■□□□□ 0.79
VCX3B-204ENST00000453306 HTRA3P83110 453 aa20■□□□□ 0.79
VCX3B-204ENST00000453306 PRPF40BQ6NWY9 871 aaKnown RBP20■□□□□ 0.79
VCX3B-204ENST00000453306 JMYQ8N9B5 988 aa20■□□□□ 0.79
VCX3B-204ENST00000453306 PLBD2Q8NHP8 589 aa20■□□□□ 0.79
VCX3B-204ENST00000453306 PI4KAP2A4QPH2 592 aa19.99■□□□□ 0.79
VCX3B-204ENST00000453306 TPTE2Q6XPS3 522 aa19.99■□□□□ 0.79
VCX3B-204ENST00000453306 PI4KAP1Q8N8J0 262 aa19.99■□□□□ 0.79
VCX3B-204ENST00000453306 BCORQ6W2J9 1755 aa19.98■□□□□ 0.79
VCX3B-204ENST00000453306 KSR2Q6VAB6 950 aa19.98■□□□□ 0.79
VCX3B-204ENST00000453306 COL11A2P13942 1736 aaPredicted RBP19.97■□□□□ 0.79
VCX3B-204ENST00000453306 NPR1P16066 1061 aa19.97■□□□□ 0.79
VCX3B-204ENST00000453306 GIGYF2Q6Y7W6 1299 aaKnown RBP19.97■□□□□ 0.79
VCX3B-204ENST00000453306 KIF6Q6ZMV9 814 aa19.97■□□□□ 0.79
VCX3B-204ENST00000453306 NIP7Q9Y221 180 aaKnown RBP eCLIP19.97■□□□□ 0.79
VCX3B-204ENST00000453306 MAP3K2Q9Y2U5 619 aa19.97■□□□□ 0.79
VCX3B-204ENST00000453306 FKBP5Q13451 457 aaPredicted RBP19.96■□□□□ 0.79
VCX3B-204ENST00000453306 ZNF34Q8IZ26 560 aa19.96■□□□□ 0.79
VCX3B-204ENST00000453306 CCDC88AQ3V6T2 1871 aa19.96■□□□□ 0.79
VCX3B-204ENST00000453306 FER1L6Q2WGJ9 1857 aa19.95■□□□□ 0.78
VCX3B-204ENST00000453306 ATP5J2-PTCD1G3V325 749 aa19.95■□□□□ 0.78
VCX3B-204ENST00000453306 IGKV5-2P06315 115 aa19.95■□□□□ 0.78
VCX3B-204ENST00000453306 TCIRG1Q13488 830 aa19.95■□□□□ 0.78
VCX3B-204ENST00000453306 CCDC93Q567U6 631 aa19.95■□□□□ 0.78
VCX3B-204ENST00000453306 RIC3Q7Z5B4 369 aa19.95■□□□□ 0.78
VCX3B-204ENST00000453306 ISCA1Q9BUE6 129 aa19.95■□□□□ 0.78
VCX3B-204ENST00000453306 UBN2Q6ZU65 1347 aa19.95■□□□□ 0.78
VCX3B-204ENST00000453306 PLIN1O60240 522 aa19.94■□□□□ 0.78
VCX3B-204ENST00000453306 GPTP24298 496 aa19.94■□□□□ 0.78
VCX3B-204ENST00000453306 GTF2E1P29083 439 aaPredicted RBP19.94■□□□□ 0.78
VCX3B-204ENST00000453306 METTL22Q9BUU2 404 aaPredicted RBP19.94■□□□□ 0.78
VCX3B-204ENST00000453306 KLRG2A4D1S0 409 aaPredicted RBP19.93■□□□□ 0.78
VCX3B-204ENST00000453306 POTECB2RU33 542 aa19.93■□□□□ 0.78
VCX3B-204ENST00000453306 DNAAF4Q8WXU2 420 aa19.93■□□□□ 0.78
VCX3B-204ENST00000453306 FRAT1Q92837 279 aaPredicted RBP19.93■□□□□ 0.78
VCX3B-204ENST00000453306 DICER1Q9UPY3 1922 aaKnown RBP19.92■□□□□ 0.78
VCX3B-204ENST00000453306 IQCA1LA6NCM1 817 aa19.92■□□□□ 0.78
VCX3B-204ENST00000453306 TRIM27P14373 513 aa19.92■□□□□ 0.78
VCX3B-204ENST00000453306 ALDH1B1P30837 517 aa19.92■□□□□ 0.78
VCX3B-204ENST00000453306 BEND3Q5T5X7 828 aa19.92■□□□□ 0.78
VCX3B-204ENST00000453306 SUSD4Q5VX71 490 aa19.92■□□□□ 0.78
VCX3B-204ENST00000453306 RTKN2Q8IZC4 609 aa19.92■□□□□ 0.78
VCX3B-204ENST00000453306 MYD88Q99836 296 aa19.92■□□□□ 0.78
VCX3B-204ENST00000453306 NYXQ9GZU5 481 aa19.92■□□□□ 0.78
VCX3B-204ENST00000453306 PTPRCP08575 1304 aa19.92■□□□□ 0.78
VCX3B-204ENST00000453306 ARFGEF2Q9Y6D5 1785 aa19.91■□□□□ 0.78
VCX3B-204ENST00000453306 SLX4Q8IY92 1834 aa19.91■□□□□ 0.78
VCX3B-204ENST00000453306 DDX58O95786 925 aaKnown RBP19.91■□□□□ 0.78
VCX3B-204ENST00000453306 RLBP1P12271 317 aa19.91■□□□□ 0.78
VCX3B-204ENST00000453306 FKBP4Q02790 459 aaKnown RBP eCLIP19.91■□□□□ 0.78
VCX3B-204ENST00000453306 CWF19L2Q2TBE0 894 aaKnown RBP19.91■□□□□ 0.78
VCX3B-204ENST00000453306 NLRP10Q86W26 655 aa19.91■□□□□ 0.78
VCX3B-204ENST00000453306 C7orf43Q8WVR3 580 aa19.91■□□□□ 0.78
VCX3B-204ENST00000453306 ARHGAP45Q92619 1136 aa19.91■□□□□ 0.78
VCX3B-204ENST00000453306 FAM177BA6PVY3 158 aa19.9■□□□□ 0.78
VCX3B-204ENST00000453306 DDNO94850 711 aaPredicted RBP19.9■□□□□ 0.78
VCX3B-204ENST00000453306 TRIM28Q13263 835 aaKnown RBP19.9■□□□□ 0.78
VCX3B-204ENST00000453306 COL13A1Q5TAT6 717 aaPredicted RBP19.9■□□□□ 0.78
VCX3B-204ENST00000453306 CHADLQ6NUI6 762 aa19.9■□□□□ 0.78
VCX3B-204ENST00000453306 ATF7IPQ6VMQ6 1270 aa19.9■□□□□ 0.78
VCX3B-204ENST00000453306 SYNE4Q8N205 404 aa19.9■□□□□ 0.78
VCX3B-204ENST00000453306 CAPN15O75808 1086 aa19.89■□□□□ 0.77
VCX3B-204ENST00000453306 C20orf194Q5TEA3 1177 aa19.89■□□□□ 0.77
VCX3B-204ENST00000453306 JARID2Q92833 1246 aaPredicted RBP19.89■□□□□ 0.77
VCX3B-204ENST00000453306 KIF16BQ96L93 1317 aa19.88■□□□□ 0.77
VCX3B-204ENST00000453306 NEURL1BA8MQ27 555 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms