RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 HDAC5Q9UQL6 1122 aa7.49□□□□□ -1.21
SDC4P-201ENST00000453285 COL24A1Q17RW2 1714 aa7.49□□□□□ -1.21
SDC4P-201ENST00000453285 TAF1P21675 1872 aa7.49□□□□□ -1.21
SDC4P-201ENST00000453285 RGS3P49796 1198 aa7.48□□□□□ -1.21
SDC4P-201ENST00000453285 FOXO4P98177 505 aa7.48□□□□□ -1.21
SDC4P-201ENST00000453285 RABL6Q3YEC7 729 aaPredicted RBP7.48□□□□□ -1.21
SDC4P-201ENST00000453285 HSP90AB3PQ58FF7 597 aa7.48□□□□□ -1.21
SDC4P-201ENST00000453285 ANKRD45Q5TZF3 282 aa7.48□□□□□ -1.21
SDC4P-201ENST00000453285 SMIM5Q71RC9 77 aa7.48□□□□□ -1.21
SDC4P-201ENST00000453285 UBE3BQ7Z3V4 1068 aa7.48□□□□□ -1.21
SDC4P-201ENST00000453285 NLRP10Q86W26 655 aa7.48□□□□□ -1.21
SDC4P-201ENST00000453285 AMIGO3Q86WK7 504 aa7.48□□□□□ -1.21
SDC4P-201ENST00000453285 SPEF2Q9C093 1822 aa7.48□□□□□ -1.21
SDC4P-201ENST00000453285 PLSCR1O15162 318 aa7.47□□□□□ -1.21
SDC4P-201ENST00000453285 RGL2O15211 777 aa7.47□□□□□ -1.21
SDC4P-201ENST00000453285 SRGAP3O43295 1099 aa7.47□□□□□ -1.21
SDC4P-201ENST00000453285 PCCAP05165 728 aaPredicted RBP7.47□□□□□ -1.21
SDC4P-201ENST00000453285 RFX5P48382 616 aaPredicted RBP7.47□□□□□ -1.21
SDC4P-201ENST00000453285 SLC27A3Q5K4L6 730 aa7.47□□□□□ -1.21
SDC4P-201ENST00000453285 ARXQ96QS3 562 aa7.47□□□□□ -1.21
SDC4P-201ENST00000453285 LNPKQ9C0E8 428 aa7.47□□□□□ -1.21
SDC4P-201ENST00000453285 BCL2L12Q9HB09 334 aa7.47□□□□□ -1.21
SDC4P-201ENST00000453285 TSHZ2Q9NRE2 1034 aa7.47□□□□□ -1.21
SDC4P-201ENST00000453285 EXOC6BQ9Y2D4 811 aa7.47□□□□□ -1.21
SDC4P-201ENST00000453285 NOP58Q9Y2X3 529 aaKnown RBP7.47□□□□□ -1.21
SDC4P-201ENST00000453285 UBN2Q6ZU65 1347 aa7.47□□□□□ -1.21
SDC4P-201ENST00000453285 QSER1Q2KHR3 1735 aa7.47□□□□□ -1.21
SDC4P-201ENST00000453285 SMARCA5O60264 1052 aaPredicted RBP7.46□□□□□ -1.22
SDC4P-201ENST00000453285 GPTP24298 496 aa7.46□□□□□ -1.22
SDC4P-201ENST00000453285 TXNRD1Q16881 649 aa7.46□□□□□ -1.22
SDC4P-201ENST00000453285 SUSD4Q5VX71 490 aa7.46□□□□□ -1.22
SDC4P-201ENST00000453285 CLEC4GQ6UXB4 293 aa7.46□□□□□ -1.22
SDC4P-201ENST00000453285 NPM2Q86SE8 214 aaKnown RBP7.46□□□□□ -1.22
SDC4P-201ENST00000453285 C16orf71Q8IYS4 520 aaPredicted RBP7.46□□□□□ -1.22
SDC4P-201ENST00000453285 SYNE4Q8N205 404 aa7.46□□□□□ -1.22
SDC4P-201ENST00000453285 ZBTB38Q8NAP3 1195 aaPredicted RBP7.46□□□□□ -1.22
SDC4P-201ENST00000453285 ARHGEF1Q92888 912 aaKnown RBP7.46□□□□□ -1.22
SDC4P-201ENST00000453285 PLA2G12BQ9BX93 195 aa7.46□□□□□ -1.22
SDC4P-201ENST00000453285 NARFQ9UHQ1 456 aa7.46□□□□□ -1.22
SDC4P-201ENST00000453285 CDHR2Q9BYE9 1310 aa7.46□□□□□ -1.22
SDC4P-201ENST00000453285 A0A1B0GUL6 1792 aa7.46□□□□□ -1.22
SDC4P-201ENST00000453285 GNPATO15228 680 aa7.45□□□□□ -1.22
SDC4P-201ENST00000453285 RAB11FIP3O75154 756 aa7.45□□□□□ -1.22
SDC4P-201ENST00000453285 SURF6O75683 361 aaKnown RBP7.45□□□□□ -1.22
SDC4P-201ENST00000453285 APBA3O96018 575 aa7.45□□□□□ -1.22
SDC4P-201ENST00000453285 CSF1RP07333 972 aa7.45□□□□□ -1.22
SDC4P-201ENST00000453285 RTL5Q5HYW3 569 aaPredicted RBP7.45□□□□□ -1.22
SDC4P-201ENST00000453285 LMBR1LQ6UX01 489 aa7.45□□□□□ -1.22
SDC4P-201ENST00000453285 PLEKHM2Q8IWE5 1019 aa7.45□□□□□ -1.22
SDC4P-201ENST00000453285 FAM89AQ96GI7 184 aa7.45□□□□□ -1.22
SDC4P-201ENST00000453285 COPRSQ9NQ92 184 aa7.45□□□□□ -1.22
SDC4P-201ENST00000453285 PA2G4Q9UQ80 394 aaKnown RBP7.45□□□□□ -1.22
SDC4P-201ENST00000453285 RTCBQ9Y3I0 505 aaKnown RBP7.45□□□□□ -1.22
SDC4P-201ENST00000453285 SALL3Q9BXA9 1300 aa7.45□□□□□ -1.22
SDC4P-201ENST00000453285 APBB1O00213 710 aa7.44□□□□□ -1.22
SDC4P-201ENST00000453285 SASH1O94885 1247 aa7.44□□□□□ -1.22
SDC4P-201ENST00000453285 NTSR2O95665 410 aa7.44□□□□□ -1.22
SDC4P-201ENST00000453285 PTPN12Q05209 780 aaKnown RBP7.44□□□□□ -1.22
SDC4P-201ENST00000453285 PARP10Q53GL7 1025 aa7.44□□□□□ -1.22
SDC4P-201ENST00000453285 USPL1Q5W0Q7 1092 aa7.44□□□□□ -1.22
SDC4P-201ENST00000453285 RHPN1Q8TCX5 695 aa7.44□□□□□ -1.22
SDC4P-201ENST00000453285 OTUD7AQ8TE49 926 aaPredicted RBP7.44□□□□□ -1.22
SDC4P-201ENST00000453285 BACH2Q9BYV9 841 aa7.44□□□□□ -1.22
SDC4P-201ENST00000453285 LRRCC1Q9C099 1032 aa7.44□□□□□ -1.22
SDC4P-201ENST00000453285 SRP68Q9UHB9 627 aaKnown RBP7.44□□□□□ -1.22
SDC4P-201ENST00000453285 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.44□□□□□ -1.22
SDC4P-201ENST00000453285 IRS4O14654 1257 aaPredicted RBP7.43□□□□□ -1.22
SDC4P-201ENST00000453285 ADRA2BP18089 450 aa7.43□□□□□ -1.22
SDC4P-201ENST00000453285 C8orf34Q49A92 452 aa7.43□□□□□ -1.22
SDC4P-201ENST00000453285 HSP90AB4PQ58FF6 505 aa7.43□□□□□ -1.22
SDC4P-201ENST00000453285 TRAPPC3LQ5T215 181 aa7.43□□□□□ -1.22
SDC4P-201ENST00000453285 TBC1D9BQ66K14 1250 aa7.43□□□□□ -1.22
SDC4P-201ENST00000453285 TTLL11Q8NHH1 800 aa7.43□□□□□ -1.22
SDC4P-201ENST00000453285 KLHDC4Q8TBB5 520 aa7.43□□□□□ -1.22
SDC4P-201ENST00000453285 AKT1S1Q96B36 256 aa7.43□□□□□ -1.22
SDC4P-201ENST00000453285 KIF1BPQ96EK5 621 aa7.43□□□□□ -1.22
SDC4P-201ENST00000453285 AK7Q96M32 723 aa7.43□□□□□ -1.22
SDC4P-201ENST00000453285 UTP14AQ9BVJ6 771 aaKnown RBP7.43□□□□□ -1.22
SDC4P-201ENST00000453285 OSBPL3Q9H4L5 887 aa7.43□□□□□ -1.22
SDC4P-201ENST00000453285 TRMT112Q9UI30 125 aaKnown RBP7.43□□□□□ -1.22
SDC4P-201ENST00000453285 NIP7Q9Y221 180 aaKnown RBP eCLIP7.43□□□□□ -1.22
SDC4P-201ENST00000453285 ZNF652Q9Y2D9 606 aa7.43□□□□□ -1.22
SDC4P-201ENST00000453285 USP42Q9H9J4 1324 aaKnown RBP7.43□□□□□ -1.22
SDC4P-201ENST00000453285 ANKRD31Q8N7Z5 1873 aa7.43□□□□□ -1.22
SDC4P-201ENST00000453285 COL4A1P02462 1669 aa7.42□□□□□ -1.22
SDC4P-201ENST00000453285 NRXN2Q9P2S2 1712 aa7.42□□□□□ -1.22
SDC4P-201ENST00000453285 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.42□□□□□ -1.22
SDC4P-201ENST00000453285 PDE8AO60658 829 aa7.42□□□□□ -1.22
SDC4P-201ENST00000453285 ZPR1O75312 459 aa7.42□□□□□ -1.22
SDC4P-201ENST00000453285 SSFA2P28290 1259 aa7.42□□□□□ -1.22
SDC4P-201ENST00000453285 ZNF827Q17R98 1081 aa7.42□□□□□ -1.22
SDC4P-201ENST00000453285 FAM161AQ3B820 660 aa7.42□□□□□ -1.22
SDC4P-201ENST00000453285 ATG9AQ7Z3C6 839 aa7.42□□□□□ -1.22
SDC4P-201ENST00000453285 CAMKK2Q96RR4 588 aa7.42□□□□□ -1.22
SDC4P-201ENST00000453285 IL1RAPL2Q9NP60 686 aa7.42□□□□□ -1.22
SDC4P-201ENST00000453285 STAP2Q9UGK3 403 aa7.42□□□□□ -1.22
SDC4P-201ENST00000453285 SH3TC1Q8TE82 1336 aa7.42□□□□□ -1.22
SDC4P-201ENST00000453285 MYO5AQ9Y4I1 1855 aaKnown RBP7.42□□□□□ -1.22
SDC4P-201ENST00000453285 AKAP11Q9UKA4 1901 aa7.42□□□□□ -1.22
SDC4P-201ENST00000453285 TNRC6CQ9HCJ0 1690 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms